Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-a12 |
| Conread position: | 83-371 |
| Cow position: | chr18:23766624-23766329 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 95-378 |
| Cow position: | chr18:36201831-36201542 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 102-371 |
| Cow position: | chr18:15517360-15517093 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 111-357 |
| Cow position: | chr18:23476862-23476621 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 111-357 |
| Cow position: | chr18:51212002-51212249 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 111-368 |
| Cow position: | chr18:55000922-55000665 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 111-371 |
| Cow position: | chr18:28658096-28657831 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 111-371 |
| Cow position: | chr18:39875445-39875180 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 111-443 |
| Cow position: | chr18:21176000-21176333 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 112-371 |
| Cow position: | chr18:17391162-17390914 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 58, 113 |
| Conread position: | 112-371 |
| Cow position: | chr18:38344620-38344886 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 170 |
| Conread position: | 112-375 |
| Cow position: | chr18:3422535-3422781 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 113-292 |
| Cow position: | chr18:44549099-44548911 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 113-333 |
| Cow position: | chr18:5487066-5487284 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 119 |
| Conread position: | 113-345 |
| Cow position: | chr18:5578122-5578361 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 113-353 |
| Cow position: | chr18:44483939-44483711 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 113-357 |
| Cow position: | chr18:29356811-29356558 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 113-362 |
| Cow position: | chr18:16686521-16686264 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 113-365 |
| Cow position: | chr18:11691592-11691335 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 118 |
| Conread position: | 113-365 |
| Cow position: | chr18:18592292-18592547 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 113-365 |
| Cow position: | chr18:33299718-33299978 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 113-365 |
| Cow position: | chr18:49100554-49100294 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 113-365 |
| Cow position: | chr18:51190775-51190525 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 113-369 |
| Cow position: | chr18:38985507-38985777 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 113-370 |
| Cow position: | chr18:4796788-4797043 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 113-370 |
| Cow position: | chr18:6610044-6609772 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 113-370 |
| Cow position: | chr18:42479772-42479507 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 113-371 |
| Cow position: | chr18:8299829-8300097 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 55, 218 |
| Conread position: | 113-371 |
| Cow position: | chr18:9974508-9974249 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 113-371 |
| Cow position: | chr18:10656261-10656519 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 113-371 |
| Cow position: | chr18:10904665-10904928 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 113-371 |
| Cow position: | chr18:10977391-10977131 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 113-371 |
| Cow position: | chr18:11183761-11184020 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 113-371 |
| Cow position: | chr18:11322412-11322676 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 113-371 |
| Cow position: | chr18:15614043-15613780 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 113-371 |
| Cow position: | chr18:25647436-25647168 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 57, 190 |
| Conread position: | 113-371 |
| Cow position: | chr18:29058678-29058421 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 113-371 |
| Cow position: | chr18:29796609-29796348 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 113-371 |
| Cow position: | chr18:33007876-33008146 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 118 |
| Conread position: | 113-371 |
| Cow position: | chr18:33407430-33407688 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 113-371 |
| Cow position: | chr18:36230904-36230647 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 113-371 |
| Cow position: | chr18:36746439-36746179 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 113-371 |
| Cow position: | chr18:37002449-37002712 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 117 |
| Conread position: | 113-371 |
| Cow position: | chr18:37023737-37023470 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 112 |
| Conread position: | 113-371 |
| Cow position: | chr18:38686910-38687160 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 113-371 |
| Cow position: | chr18:44262442-44262710 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 113-371 |
| Cow position: | chr18:48713365-48713631 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 117 |
| Conread position: | 113-371 |
| Cow position: | chr18:56159276-56159541 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 113-371 |
| Cow position: | chr18:56183757-56184015 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 113-372 |
| Cow position: | chr18:28924018-28923765 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 113-373 |
| Cow position: | chr18:30794250-30794508 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 113-373 |
| Cow position: | chr18:31082511-31082265 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 253, 46 |
| Conread position: | 113-375 |
| Cow position: | chr18:7952464-7952722 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 113-380 |
| Cow position: | chr18:29759862-29760117 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 256, 16 |
| Conread position: | 113-400 |
| Cow position: | chr18:21195522-21195224 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 113-443 |
| Cow position: | chr18:44802072-44801742 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 115-365 |
| Cow position: | chr18:42431789-42431537 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 120 |
| Conread position: | 115-373 |
| Cow position: | chr18:2592351-2592086 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 115-404 |
| Cow position: | chr18:54111037-54111316 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 116-375 |
| Cow position: | chr18:43555706-43555439 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 118 |
| Conread position: | 117-361 |
| Cow position: | chr18:55461888-55461639 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 117-371 |
| Cow position: | chr18:42432274-42432009 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 118-355 |
| Cow position: | chr18:10575929-10576175 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 52, 118 |
| Conread position: | 118-365 |
| Cow position: | chr18:28101452-28101706 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 118-370 |
| Cow position: | chr18:28930809-28930557 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 118-371 |
| Cow position: | chr18:1954769-1954509 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 118-371 |
| Cow position: | chr18:3158782-3158515 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 118-371 |
| Cow position: | chr18:19619773-19620021 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 50, 63 |
| Conread position: | 118-374 |
| Cow position: | chr18:3180241-3180494 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 118-375 |
| Cow position: | chr18:21740989-21740731 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 118-377 |
| Cow position: | chr18:4884690-4884434 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 78, 115 |
| Conread position: | 118-378 |
| Cow position: | chr18:47828648-47828905 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 119-369 |
| Cow position: | chr18:11684810-11685060 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 119-371 |
| Cow position: | chr18:17005076-17005341 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 119-371 |
| Cow position: | chr18:19896634-19896371 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 120-335 |
| Cow position: | chr18:14815515-14815304 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 120-359 |
| Cow position: | chr18:13507916-13507672 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 50, 122 |
| Conread position: | 120-370 |
| Cow position: | chr18:5766235-5766492 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 114 |
| Conread position: | 120-370 |
| Cow position: | chr18:35012484-35012239 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 120-371 |
| Cow position: | chr18:29958335-29958091 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 120-371 |
| Cow position: | chr18:45637574-45637336 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 120-371 |
| Cow position: | chr18:50082427-50082177 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 120-373 |
| Cow position: | chr18:22056045-22055789 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 113 |
| Conread position: | 120-377 |
| Cow position: | chr18:19646000-19646259 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 122-369 |
| Cow position: | chr18:7076790-7077032 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 122-371 |
| Cow position: | chr18:25282728-25282474 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 124-367 |
| Cow position: | chr18:38607050-38607297 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 124-369 |
| Cow position: | chr18:19193539-19193287 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 125-363 |
| Cow position: | chr18:47183455-47183221 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 125-371 |
| Cow position: | chr18:20641663-20641416 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 125-375 |
| Cow position: | chr18:33896600-33896334 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 126-367 |
| Cow position: | chr18:45570843-45571088 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 126-370 |
| Cow position: | chr18:11867169-11867419 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 127-363 |
| Cow position: | chr18:20126135-20126377 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 187 |
| Conread position: | 127-370 |
| Cow position: | chr18:8171255-8171006 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 127-371 |
| Cow position: | chr18:30586390-30586145 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 132-372 |
| Cow position: | chr18:48633627-48633857 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 93 |
| Conread position: | 133-371 |
| Cow position: | chr18:1571401-1571157 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 134-371 |
| Cow position: | chr18:11779496-11779733 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 136-314 |
| Cow position: | chr18:11831967-11832143 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 136-371 |
| Cow position: | chr18:11790772-11791001 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 141-363 |
| Cow position: | chr18:20462850-20462622 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 141-371 |
| Cow position: | chr18:52854893-52855135 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 147-371 |
| Cow position: | chr18:36768955-36768731 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 147-371 |
| Cow position: | chr18:51594952-51594724 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 155-371 |
| Cow position: | chr18:23630741-23630527 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 176-371 |
| Cow position: | chr18:35367298-35367115 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 168, 44 |
| Conread position: | 182-341 |
| Cow position: | chr18:19687915-19688074 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-364 |
| Cow position: | chr18:52403077-52402905 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 182-369 |
| Cow position: | chr18:19883424-19883611 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 182-370 |
| Cow position: | chr18:49841173-49841356 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 182-371 |
| Cow position: | chr18:31711673-31711482 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 178 |
| Conread position: | 182-371 |
| Cow position: | chr18:54130439-54130250 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 182-373 |
| Cow position: | chr18:49017397-49017575 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 185-306 |
| Cow position: | chr18:29991616-29991495 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-368 |
| Cow position: | chr18:53038724-53038910 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 185-371 |
| Cow position: | chr18:25598344-25598152 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 185-371 |
| Cow position: | chr18:49038357-49038542 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 189-365 |
| Cow position: | chr18:2146686-2146505 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 149 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 189-371 |
| Cow position: | chr18:49015027-49015197 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 189-408 |
| Cow position: | chr18:17660656-17660439 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 183, 33 |
| Conread position: | 190-371 |
| Cow position: | chr18:11313036-11312856 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 192-362 |
| Cow position: | chr18:52406604-52406763 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 192-370 |
| Cow position: | chr18:20798224-20798407 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 192-370 |
| Cow position: | chr18:22569163-22568987 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 192-371 |
| Cow position: | chr18:32189607-32189429 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 169 |
| Conread position: | 195-365 |
| Cow position: | chr18:49981542-49981365 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 196-371 |
| Cow position: | chr18:56301798-56301972 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 197-371 |
| Cow position: | chr18:42954157-42953969 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 198-374 |
| Cow position: | chr18:9176811-9176979 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 208-371 |
| Cow position: | chr18:14225308-14225474 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 214-373 |
| Cow position: | chr18:47705162-47705317 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 224-371 |
| Cow position: | chr18:49324500-49324357 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 225-370 |
| Cow position: | chr18:15809865-15809724 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 225-373 |
| Cow position: | chr18:52649413-52649265 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-371 |
| Cow position: | chr18:47548051-47547907 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 227-371 |
| Cow position: | chr18:56172074-56171934 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 232-366 |
| Cow position: | chr18:21081950-21081817 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 232-371 |
| Cow position: | chr18:23505272-23505411 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 233-375 |
| Cow position: | chr18:44917700-44917841 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 234-334 |
| Cow position: | chr18:38806529-38806629 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-365 |
| Cow position: | chr18:25006550-25006419 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-371 |
| Cow position: | chr18:18843957-18844096 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 234-371 |
| Cow position: | chr18:44523031-44523167 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 77, 38 |
Show alignments to all cow chromosomes.