Cow genome map

Conread name: Ovi2-UMC-peov1-002-a12

Conread position: 110-370
Cow position: chr29:29769507-29769241 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 62, 117

Conread position: 110-371
Cow position: chr29:29314811-29314549 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 131

Conread position: 111-365
Cow position: chr29:17154612-17154883 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 201

Conread position: 111-369
Cow position: chr29:34297720-34297459 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 61, 37

Conread position: 111-371
Cow position: chr29:29057026-29057286 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 122

Conread position: 111-371
Cow position: chr29:39329747-39329492 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 7

Conread position: 111-372
Cow position: chr29:26559393-26559134 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 25

Conread position: 111-373
Cow position: chr29:35291935-35292206 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 129

Conread position: 113-305
Cow position: chr29:1124502-1124700 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 123

Conread position: 113-324
Cow position: chr29:9718922-9718708 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 128

Conread position: 113-333
Cow position: chr29:31674477-31674706 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 56, 129

Conread position: 113-335
Cow position: chr29:22714877-22714648 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 127

Conread position: 113-341
Cow position: chr29:28396535-28396776 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 113-357
Cow position: chr29:4520182-4520433 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 181

Conread position: 113-357
Cow position: chr29:23984112-23983858 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 137

Conread position: 113-361
Cow position: chr29:28868483-28868744 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 128

Conread position: 113-362
Cow position: chr29:27826373-27826622 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 119

Conread position: 113-365
Cow position: chr29:11433969-11434224 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 80

Conread position: 113-365
Cow position: chr29:22162406-22162144 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 113-365
Cow position: chr29:23155101-23155331 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 113-369
Cow position: chr29:10058689-10058429 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 58, 116

Conread position: 113-369
Cow position: chr29:25091959-25092215 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 54, 155

Conread position: 113-369
Cow position: chr29:25737571-25737305 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 113-369
Cow position: chr29:35501804-35501544 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 101

Conread position: 113-370
Cow position: chr29:5186648-5186383 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 49

Conread position: 113-370
Cow position: chr29:26416207-26416460 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 33

Conread position: 113-370
Cow position: chr29:42364167-42363906 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 117

Conread position: 113-371
Cow position: chr29:87171-86901 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 245

Conread position: 113-371
Cow position: chr29:8926607-8926350 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 113-371
Cow position: chr29:9709543-9709806 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 44

Conread position: 113-371
Cow position: chr29:13639523-13639255 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 128

Conread position: 113-371
Cow position: chr29:16609588-16609859 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 113-371
Cow position: chr29:17296978-17297247 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 124

Conread position: 113-371
Cow position: chr29:17607267-17607527 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 57, 123

Conread position: 113-371
Cow position: chr29:19762123-19762379 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 117

Conread position: 113-371
Cow position: chr29:20903437-20903179 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 41

Conread position: 113-371
Cow position: chr29:22029092-22028844 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 116, 57

Conread position: 113-371
Cow position: chr29:22613273-22613538 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 57, 238

Conread position: 113-371
Cow position: chr29:25088600-25088854 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 119

Conread position: 113-371
Cow position: chr29:27588770-27589034 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 119

Conread position: 113-371
Cow position: chr29:34773887-34773625 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 119

Conread position: 113-371
Cow position: chr29:37618153-37618417 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 124

Conread position: 113-371
Cow position: chr29:40117419-40117682 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 21

Conread position: 113-372
Cow position: chr29:732468-732727 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 27

Conread position: 113-372
Cow position: chr29:16195696-16195952 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 111

Conread position: 113-372
Cow position: chr29:26778735-26778994 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 116, 170

Conread position: 113-373
Cow position: chr29:12680005-12680266 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 57, 116

Conread position: 113-373
Cow position: chr29:24252085-24252343 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 127

Conread position: 113-373
Cow position: chr29:28166366-28166109 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 120

Conread position: 113-373
Cow position: chr29:39111468-39111202 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 57, 221

Conread position: 113-374
Cow position: chr29:5892697-5892959 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 113-376
Cow position: chr29:45005776-45005512 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 113-377
Cow position: chr29:36216964-36217229 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 109

Conread position: 118-371
Cow position: chr29:4480320-4480062 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 118

Conread position: 118-376
Cow position: chr29:2744420-2744154 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 239

Conread position: 119-342
Cow position: chr29:44682244-44682022 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 104

Conread position: 119-370
Cow position: chr29:23244027-23243768 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 120-317
Cow position: chr29:10456705-10456508 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 110

Conread position: 120-336
Cow position: chr29:17668353-17668563 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 47

Conread position: 120-344
Cow position: chr29:868627-868859 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 107

Conread position: 120-365
Cow position: chr29:31943732-31943973 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 67

Conread position: 120-371
Cow position: chr29:11054006-11053749 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 119

Conread position: 120-371
Cow position: chr29:17109822-17110068 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 50, 95

Conread position: 121-365
Cow position: chr29:18085448-18085677 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 122-327
Cow position: chr29:44988924-44988723 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 38

Conread position: 122-373
Cow position: chr29:10156449-10156193 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 112

Conread position: 124-373
Cow position: chr29:356183-356435 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 119

Conread position: 127-362
Cow position: chr29:27329753-27329994 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 43, 110

Conread position: 137-370
Cow position: chr29:34359109-34358868 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 97

Conread position: 147-371
Cow position: chr29:25474801-25475034 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 90

Conread position: 179-372
Cow position: chr29:23220579-23220389 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 180-369
Cow position: chr29:16290646-16290836 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 53

Conread position: 182-362
Cow position: chr29:18012480-18012660 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 50

Conread position: 182-362
Cow position: chr29:24578784-24578965 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 185-363
Cow position: chr29:5063076-5063248 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 185-368
Cow position: chr29:36952371-36952194 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 185-369
Cow position: chr29:30548702-30548885 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 185-373
Cow position: chr29:20770272-20770457 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 47

Conread position: 187-371
Cow position: chr29:32656362-32656545 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 149, 52

Conread position: 189-371
Cow position: chr29:32176612-32176783 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 190-386
Cow position: chr29:12626045-12625851 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 192-371
Cow position: chr29:44139310-44139133 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 192-373
Cow position: chr29:29324478-29324314 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 194-371
Cow position: chr29:31928923-31929098 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 44

Conread position: 201-370
Cow position: chr29:22167137-22166971 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 156, 0

Conread position: 202-370
Cow position: chr29:31200201-31200368 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 207-372
Cow position: chr29:26887881-26887724 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 212-365
Cow position: chr29:30918503-30918654 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 227-371
Cow position: chr29:40791277-40791414 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 235-373
Cow position: chr29:22723576-22723714 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 238-369
Cow position: chr29:9378614-9378746 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 240-375
Cow position: chr29:39038289-39038154 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 246-378
Cow position: chr29:29308586-29308454 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 128

Show alignments to all cow chromosomes.