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Cow genome map

           
Conread name:
           
Ovi2-UMC-peov1-002-a12
        

               
Conread position:
               
110-370
               

               
Cow position:
               
chr5:21617329-21617596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
110-371
               

               
Cow position:
               
chr5:56680118-56680395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
110-373
               

               
Cow position:
               
chr5:62172287-62172552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr5:44752437-44752173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
111-367
               

               
Cow position:
               
chr5:52000096-52000353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
111-369
               

               
Cow position:
               
chr5:39447657-39447395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr5:9894253-9893985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr5:4710271-4710013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr5:11427364-11427096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr5:39874997-39875263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr5:56317170-56317428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
111-375
               

               
Cow position:
               
chr5:65752728-65753002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 255
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr5:14629941-14629659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
112-371
               

               
Cow position:
               
chr5:43457643-43457392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
113-315
               

               
Cow position:
               
chr5:34638758-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr5:34528435-34528641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr5:20407793-20407562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
113-353
               

               
Cow position:
               
chr5:58793737-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr5:67540329-67540078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
113-358
               

               
Cow position:
               
chr5:31640305-31640551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
113-359
               

               
Cow position:
               
chr5:33537764-33538001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
216, 45
               

               
Conread position:
               
113-362
               

               
Cow position:
               
chr5:19813341-19813090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
113-364
               

               
Cow position:
               
chr5:34300790-34301048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 180
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr5:6286550-6286300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr5:29903648-29903390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr5:50821656-50821916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr5:57626680-57626921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr5:63865669-63865937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 186
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr5:72951713-72951977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
113-366
               

               
Cow position:
               
chr5:7755688-7755437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr5:57575643-57575909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr5:57935235-57934972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
113-369
               

               
Cow position:
               
chr5:46512889-46512632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
113-369
               

               
Cow position:
               
chr5:65967854-65967594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr5:23168951-23168688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr5:30950042-30949777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr5:70952002-70951751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:991340-991613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:5111199-5110930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:6504006-6503742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:8821134-8820874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:9090146-9089889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 227
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:11229795-11229534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:18289003-18289261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:21828740-21829006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:28224326-28224591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:28302866-28302604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:30253615-30253880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:30629284-30629018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:35247236-35246971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:38832997-38833260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:41546015-41545754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:43929862-43929597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:44028427-44028170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:44446994-44446726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:44994164-44993910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:46425977-46425716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:55955783-55956051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:55967005-55966744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:56070730-56070998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:56877362-56877621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:57101902-57101644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 184
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:57736984-57737238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:63987577-63987307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr5:65776508-65776245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
113-372
               

               
Cow position:
               
chr5:34561886-34562157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
113-373
               

               
Cow position:
               
chr5:15363768-15364023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
113-373
               

               
Cow position:
               
chr5:20783498-20783763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
113-373
               

               
Cow position:
               
chr5:55068584-55068847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr5:30276571-30276832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr5:30844987-30845250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
113-375
               

               
Cow position:
               
chr5:24996349-24996080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
113-375
               

               
Cow position:
               
chr5:26467497-26467771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
113-375
               

               
Cow position:
               
chr5:66257513-66257779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr5:1247150-1247407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
113-378
               

               
Cow position:
               
chr5:14314399-14314673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 270
               

               
Conread position:
               
113-383
               

               
Cow position:
               
chr5:64139440-64139712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr5:3627277-3627096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
115-348
               

               
Cow position:
               
chr5:59717624-59717852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 80
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr5:22666969-22667210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
115-371
               

               
Cow position:
               
chr5:74643795-74643539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
115-375
               

               
Cow position:
               
chr5:25231128-25230876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
116-369
               

               
Cow position:
               
chr5:37814501-37814763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
116-371
               

               
Cow position:
               
chr5:64592215-64591956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
118-312
               

               
Cow position:
               
chr5:50799419-50799614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
118-317
               

               
Cow position:
               
chr5:31144908-31144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
118-347
               

               
Cow position:
               
chr5:32696941-32696708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
118-369
               

               
Cow position:
               
chr5:2309681-2309421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
118-370
               

               
Cow position:
               
chr5:56028648-56028403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr5:12322922-12322666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr5:40109378-40109631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr5:56014613-56014870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr5:56524054-56524313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr5:66366397-66366654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr5:69461213-69461474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 217
               

               
Conread position:
               
118-375
               

               
Cow position:
               
chr5:17087146-17086878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
119-332
               

               
Cow position:
               
chr5:69520773-69520991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr5:7044827-7044572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 128
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr5:46509986-46509731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr5:63992283-63992039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr5:32339084-32338827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr5:35826483-35826740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr5:51053768-51053510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
119-373
               

               
Cow position:
               
chr5:6528562-6528826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
120-359
               

               
Cow position:
               
chr5:48009968-48009732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
120-368
               

               
Cow position:
               
chr5:49440991-49440734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
120-370
               

               
Cow position:
               
chr5:6045172-6045434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
120-370
               

               
Cow position:
               
chr5:26477131-26476880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr5:7723551-7723804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr5:26094288-26094027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr5:36855085-36855344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr5:50533506-50533249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
120-373
               

               
Cow position:
               
chr5:41713183-41713440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
120-377
               

               
Cow position:
               
chr5:45574497-45574765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
121-299
               

               
Cow position:
               
chr5:64823429-64823244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
121-370
               

               
Cow position:
               
chr5:19278818-19278569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
121-371
               

               
Cow position:
               
chr5:16206273-16206016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
122-368
               

               
Cow position:
               
chr5:67243812-67244054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 93
               

               
Conread position:
               
122-370
               

               
Cow position:
               
chr5:12673579-12673340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
122-371
               

               
Cow position:
               
chr5:18898862-18899112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
122-371
               

               
Cow position:
               
chr5:31052279-31052531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
123-365
               

               
Cow position:
               
chr5:57074450-57074198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
123-371
               

               
Cow position:
               
chr5:68718760-68719006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
124-365
               

               
Cow position:
               
chr5:15722181-15721941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
125-373
               

               
Cow position:
               
chr5:49474659-49474404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
126-306
               

               
Cow position:
               
chr5:6670307-6670119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
127-371
               

               
Cow position:
               
chr5:7697893-7698139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
132-370
               

               
Cow position:
               
chr5:20422291-20422055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr5:12434428-12434682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr5:38076590-38076344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr5:60183694-60183944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
134-371
               

               
Cow position:
               
chr5:62378686-62378919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr5:41164982-41165226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr5:54375611-54375364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr5:12557396-12557148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
136-341
               

               
Cow position:
               
chr5:37255434-37255226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr5:36039107-36038862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr5:55232898-55232674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
141-371
               

               
Cow position:
               
chr5:22242872-22242626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr5:72006550-72006357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
182-365
               

               
Cow position:
               
chr5:1461040-1461222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
182-366
               

               
Cow position:
               
chr5:24136666-24136848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
182-371
               

               
Cow position:
               
chr5:61455798-61455982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
182-371
               

               
Cow position:
               
chr5:67118371-67118559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
182-371
               

               
Cow position:
               
chr5:67212309-67212499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
182-376
               

               
Cow position:
               
chr5:43402853-43403047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
183-344
               

               
Cow position:
               
chr5:45472234-45472399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
185-335
               

               
Cow position:
               
chr5:63192786-63192638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
185-371
               

               
Cow position:
               
chr5:56339064-56338882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
187-371
               

               
Cow position:
               
chr5:22795171-22795353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr5:61102674-61102849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
189-375
               

               
Cow position:
               
chr5:20288304-20288119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
190-365
               

               
Cow position:
               
chr5:63150207-63150036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
192-335
               

               
Cow position:
               
chr5:43408396-43408255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
192-359
               

               
Cow position:
               
chr5:26150458-26150294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
192-365
               

               
Cow position:
               
chr5:56211864-56212039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
192-371
               

               
Cow position:
               
chr5:16214647-16214826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-371
               

               
Cow position:
               
chr5:29912380-29912559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
192-371
               

               
Cow position:
               
chr5:49342086-49341910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
193-375
               

               
Cow position:
               
chr5:59627010-59626829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
194-371
               

               
Cow position:
               
chr5:57686776-57686598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
194-375
               

               
Cow position:
               
chr5:35982776-35982594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr5:30232871-30233044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
157, 142
               

               
Conread position:
               
195-372
               

               
Cow position:
               
chr5:56517068-56517244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
196-374
               

               
Cow position:
               
chr5:26549175-26548998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr5:56334541-56334376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
207-365
               

               
Cow position:
               
chr5:45187142-45186987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
219-362
               

               
Cow position:
               
chr5:45574380-45574235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
219-364
               

               
Cow position:
               
chr5:63627541-63627403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
219-370
               

               
Cow position:
               
chr5:55795981-55795828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
224-365
               

               
Cow position:
               
chr5:60599212-60599073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
228-371
               

               
Cow position:
               
chr5:61049328-61049471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 117
               

               
Conread position:
               
232-371
               

               
Cow position:
               
chr5:50824592-50824731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
232-376
               

               
Cow position:
               
chr5:40241746-40241885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
234-370
               

               
Cow position:
               
chr5:69383257-69383392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr5:9170579-9170445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr5:34915051-34914914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr5:45126653-45126791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
236-371
               

               
Cow position:
               
chr5:17605130-17604993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
236-373
               

               
Cow position:
               
chr5:44874197-44874333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
241-371
               

               
Cow position:
               
chr5:60948142-60948271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
242-365
               

               
Cow position:
               
chr5:75228189-75228066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-371
               

               
Cow position:
               
chr5:46704287-46704160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-371
               

               
Cow position:
               
chr5:55849905-55850019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               
Show alignments to all cow chromosomes.