Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-a12 |
| Conread position: | 94-371 |
| Cow position: | chr9:3738023-3738308 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 104-370 |
| Cow position: | chr9:11168920-11168647 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 106-371 |
| Cow position: | chr9:8901036-8901310 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 109-371 |
| Cow position: | chr9:54493308-54493051 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 110-374 |
| Cow position: | chr9:44710007-44709742 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 111-316 |
| Cow position: | chr9:36827313-36827106 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 111-361 |
| Cow position: | chr9:41679926-41679673 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 111-371 |
| Cow position: | chr9:1973125-1972864 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 111-371 |
| Cow position: | chr9:9199603-9199863 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 111-371 |
| Cow position: | chr9:18216923-18217183 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 113-287 |
| Cow position: | chr9:30195390-30195214 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 113-306 |
| Cow position: | chr9:22361192-22360991 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 113-311 |
| Cow position: | chr9:3410950-3410758 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 85 |
| Conread position: | 113-315 |
| Cow position: | chr9:9416222-9416423 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 113-333 |
| Cow position: | chr9:38344071-38343843 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 190 |
| Conread position: | 113-362 |
| Cow position: | chr9:44921210-44921474 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 113-362 |
| Cow position: | chr9:51204901-51204652 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 113-363 |
| Cow position: | chr9:50606768-50607021 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 113-364 |
| Cow position: | chr9:46316605-46316858 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 54, 63 |
| Conread position: | 113-365 |
| Cow position: | chr9:20091222-20090968 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 113-369 |
| Cow position: | chr9:5226987-5227257 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 113-369 |
| Cow position: | chr9:9402995-9403261 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 113-369 |
| Cow position: | chr9:17799808-17799550 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 113-369 |
| Cow position: | chr9:28747344-28747602 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 113-369 |
| Cow position: | chr9:45141424-45141682 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 113-369 |
| Cow position: | chr9:48628208-48627946 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 113-369 |
| Cow position: | chr9:53762878-53762612 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 113-370 |
| Cow position: | chr9:5246036-5245770 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 113-370 |
| Cow position: | chr9:22443441-22443710 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 113-370 |
| Cow position: | chr9:28354699-28354434 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 113-370 |
| Cow position: | chr9:45756537-45756280 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 113-371 |
| Cow position: | chr9:5501038-5500768 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 181 |
| Conread position: | 113-371 |
| Cow position: | chr9:6952271-6952017 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 122, 65 |
| Conread position: | 113-371 |
| Cow position: | chr9:8288798-8288534 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 113-371 |
| Cow position: | chr9:8534504-8534780 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 113-371 |
| Cow position: | chr9:8563018-8562738 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 205 |
| Conread position: | 113-371 |
| Cow position: | chr9:8998537-8998265 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 113-371 |
| Cow position: | chr9:13205387-13205650 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 113-371 |
| Cow position: | chr9:14796592-14796854 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 113-371 |
| Cow position: | chr9:21459977-21460235 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 113-371 |
| Cow position: | chr9:21888350-21888086 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 113-371 |
| Cow position: | chr9:23388497-23388756 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 127 |
| Conread position: | 113-371 |
| Cow position: | chr9:28726540-28726814 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 113-371 |
| Cow position: | chr9:29184952-29185221 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 113-371 |
| Cow position: | chr9:30124101-30123845 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 113-371 |
| Cow position: | chr9:33218771-33219033 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 113-371 |
| Cow position: | chr9:34286981-34286715 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 113-371 |
| Cow position: | chr9:34468404-34468662 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 113-371 |
| Cow position: | chr9:38793194-38792934 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 117 |
| Conread position: | 113-371 |
| Cow position: | chr9:50139466-50139201 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 113-371 |
| Cow position: | chr9:54528692-54528430 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 113-371 |
| Cow position: | chr9:56773260-56772992 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 113-371 |
| Cow position: | chr9:58451920-58452159 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 113-371 |
| Cow position: | chr9:61303184-61302916 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 113-371 |
| Cow position: | chr9:62357348-62357612 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 148 |
| Conread position: | 113-371 |
| Cow position: | chr9:64091865-64091595 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 113-372 |
| Cow position: | chr9:34957874-34958141 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 113-373 |
| Cow position: | chr9:33119705-33119974 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 121 |
| Conread position: | 113-373 |
| Cow position: | chr9:52578356-52578633 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 113-374 |
| Cow position: | chr9:4267803-4268069 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 113-374 |
| Cow position: | chr9:5763453-5763717 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 120 |
| Conread position: | 113-374 |
| Cow position: | chr9:11319453-11319721 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 113-375 |
| Cow position: | chr9:62907863-62908107 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 113-377 |
| Cow position: | chr9:10118484-10118743 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 113-377 |
| Cow position: | chr9:32371580-32371841 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 115-362 |
| Cow position: | chr9:19493284-19493541 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 115-371 |
| Cow position: | chr9:41728435-41728176 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 115-371 |
| Cow position: | chr9:52267581-52267839 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 118-362 |
| Cow position: | chr9:23430970-23431222 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 118-368 |
| Cow position: | chr9:36445799-36445540 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 55, 256 |
| Conread position: | 118-371 |
| Cow position: | chr9:6192287-6192543 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 47, 116 |
| Conread position: | 118-371 |
| Cow position: | chr9:7634449-7634187 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 118-371 |
| Cow position: | chr9:55084121-55084385 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 118-373 |
| Cow position: | chr9:64106083-64105813 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 118-387 |
| Cow position: | chr9:24887374-24887105 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 119-366 |
| Cow position: | chr9:5319804-5319543 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 119-370 |
| Cow position: | chr9:16300391-16300652 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 119-371 |
| Cow position: | chr9:1938304-1938040 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 113 |
| Conread position: | 119-371 |
| Cow position: | chr9:31078910-31079163 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 119-371 |
| Cow position: | chr9:56032154-56032399 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 120-364 |
| Cow position: | chr9:5509895-5509649 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 52, 112 |
| Conread position: | 120-365 |
| Cow position: | chr9:44831881-44832129 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 120-365 |
| Cow position: | chr9:60027371-60027119 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 120-366 |
| Cow position: | chr9:25557139-25556893 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-371 |
| Cow position: | chr9:9595781-9596036 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 115 |
| Conread position: | 120-375 |
| Cow position: | chr9:33823272-33823029 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 242, 52 |
| Conread position: | 121-373 |
| Cow position: | chr9:30477608-30477860 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 122-371 |
| Cow position: | chr9:13670804-13670549 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 122-371 |
| Cow position: | chr9:31347126-31346866 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 122-373 |
| Cow position: | chr9:10308836-10309082 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 122-377 |
| Cow position: | chr9:20848103-20847844 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 119 |
| Conread position: | 123-314 |
| Cow position: | chr9:34742558-34742751 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 123-371 |
| Cow position: | chr9:39011306-39011553 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 125-371 |
| Cow position: | chr9:5263669-5263416 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 44, 178 |
| Conread position: | 125-371 |
| Cow position: | chr9:17871935-17872194 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 125-371 |
| Cow position: | chr9:20579437-20579678 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 131 |
| Conread position: | 126-369 |
| Cow position: | chr9:57896952-57897192 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 129-370 |
| Cow position: | chr9:38624461-38624707 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 136-371 |
| Cow position: | chr9:5077563-5077789 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 143-370 |
| Cow position: | chr9:41394504-41394730 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 182-353 |
| Cow position: | chr9:41486139-41486308 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 182-371 |
| Cow position: | chr9:5836256-5836061 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 43 |
| Conread position: | 182-371 |
| Cow position: | chr9:6596133-6596314 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 182-371 |
| Cow position: | chr9:9311962-9311774 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 173, 50 |
| Conread position: | 182-371 |
| Cow position: | chr9:45171117-45171307 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 182-373 |
| Cow position: | chr9:28754921-28754733 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 185-358 |
| Cow position: | chr9:21080661-21080492 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 185-376 |
| Cow position: | chr9:29194924-29195112 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 189-371 |
| Cow position: | chr9:6189275-6189449 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 189-371 |
| Cow position: | chr9:7952996-7952817 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 190-365 |
| Cow position: | chr9:44770104-44770270 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 190-371 |
| Cow position: | chr9:9686319-9686496 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 192-366 |
| Cow position: | chr9:23955892-23956059 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 192-369 |
| Cow position: | chr9:17840583-17840760 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-370 |
| Cow position: | chr9:37199215-37199044 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 194-368 |
| Cow position: | chr9:13460329-13460499 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 196-370 |
| Cow position: | chr9:34024789-34024616 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 196-371 |
| Cow position: | chr9:24652499-24652320 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 199-371 |
| Cow position: | chr9:50382240-50382406 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 203-370 |
| Cow position: | chr9:30780195-30780035 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 204-371 |
| Cow position: | chr9:41785291-41785128 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 213-363 |
| Cow position: | chr9:52257989-52258138 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 219-371 |
| Cow position: | chr9:3343817-3343665 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-366 |
| Cow position: | chr9:6685952-6685820 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-369 |
| Cow position: | chr9:52828710-52828574 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 234-370 |
| Cow position: | chr9:39758571-39758435 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-371 |
| Cow position: | chr9:33151795-33151658 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-371 |
| Cow position: | chr9:16137290-16137426 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-371 |
| Cow position: | chr9:23970845-23970981 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 236-372 |
| Cow position: | chr9:52518772-52518909 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 239-371 |
| Cow position: | chr9:55354659-55354527 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 239-375 |
| Cow position: | chr9:20637420-20637286 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 244-373 |
| Cow position: | chr9:11098413-11098539 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 245-366 |
| Cow position: | chr9:22165671-22165791 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 246-373 |
| Cow position: | chr9:3924484-3924356 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 52 |
| Conread position: | 247-371 |
| Cow position: | chr9:42586516-42586640 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-371 |
| Cow position: | chr9:35793710-35793593 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.