Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-a12 |
| Conread position: | 80-369 |
| Cow position: | chrX:34313869-34314162 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 42, 163 |
| Conread position: | 110-363 |
| Cow position: | chrX:27432042-27431786 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 110-374 |
| Cow position: | chrX:3579816-3580087 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 238 |
| Conread position: | 110-375 |
| Cow position: | chrX:38853070-38853342 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 107 |
| Conread position: | 111-362 |
| Cow position: | chrX:1514532-1514288 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 111-365 |
| Cow position: | chrX:8925576-8925833 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 111-370 |
| Cow position: | chrX:31436351-31436614 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 111-371 |
| Cow position: | chrX:7695621-7695888 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 111-371 |
| Cow position: | chrX:30963001-30962736 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 111-371 |
| Cow position: | chrX:41870946-41871207 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 111-373 |
| Cow position: | chrX:34401873-34402148 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 111-373 |
| Cow position: | chrX:45430144-45429880 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 112-341 |
| Cow position: | chrX:13912953-13913185 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 113-281 |
| Cow position: | chrX:19015313-19015487 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 113-284 |
| Cow position: | chrX:9954020-9954192 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 113-300 |
| Cow position: | chrX:26876008-26875812 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 57, 129 |
| Conread position: | 113-305 |
| Cow position: | chrX:13785488-13785286 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 58, 130 |
| Conread position: | 113-341 |
| Cow position: | chrX:16996378-16996602 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 113-344 |
| Cow position: | chrX:7509017-7509252 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 113-346 |
| Cow position: | chrX:15814962-15815198 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 113-362 |
| Cow position: | chrX:35273231-35273495 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 54, 195 |
| Conread position: | 113-363 |
| Cow position: | chrX:1499540-1499798 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 113-363 |
| Cow position: | chrX:23514140-23513889 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 113-364 |
| Cow position: | chrX:11939052-11938801 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 113-365 |
| Cow position: | chrX:4996476-4996721 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 113-365 |
| Cow position: | chrX:29542344-29542093 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 113-365 |
| Cow position: | chrX:35224171-35224431 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 113-366 |
| Cow position: | chrX:42171421-42171162 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 129 |
| Conread position: | 113-368 |
| Cow position: | chrX:10412110-10411847 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 120 |
| Conread position: | 113-369 |
| Cow position: | chrX:27227998-27228265 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 113-369 |
| Cow position: | chrX:36355990-36356243 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 113-370 |
| Cow position: | chrX:21986417-21986152 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 113-370 |
| Cow position: | chrX:29680385-29680122 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 113-370 |
| Cow position: | chrX:34505172-34504910 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 113-370 |
| Cow position: | chrX:35542770-35543026 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 113-370 |
| Cow position: | chrX:38642136-38642388 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 113-370 |
| Cow position: | chrX:41884539-41884273 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 53, 121 |
| Conread position: | 113-371 |
| Cow position: | chrX:1616169-1615908 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 183 |
| Conread position: | 113-371 |
| Cow position: | chrX:4399004-4399259 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 56, 142 |
| Conread position: | 113-371 |
| Cow position: | chrX:5919371-5919637 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 113-371 |
| Cow position: | chrX:7646131-7646396 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 113-371 |
| Cow position: | chrX:11655967-11656221 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 113-371 |
| Cow position: | chrX:12979952-12979694 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 113-371 |
| Cow position: | chrX:13647910-13647645 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 113-371 |
| Cow position: | chrX:15007275-15007010 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 113-371 |
| Cow position: | chrX:17662718-17662458 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 113-371 |
| Cow position: | chrX:31252293-31252547 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 57, 121 |
| Conread position: | 113-371 |
| Cow position: | chrX:31311904-31312169 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 113-371 |
| Cow position: | chrX:31442947-31442689 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 113-371 |
| Cow position: | chrX:31729318-31729582 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 113-371 |
| Cow position: | chrX:32623461-32623710 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 113-371 |
| Cow position: | chrX:34238595-34238861 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 235 |
| Conread position: | 113-371 |
| Cow position: | chrX:34502797-34503060 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 113-371 |
| Cow position: | chrX:34543661-34543924 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 40, 237 |
| Conread position: | 113-371 |
| Cow position: | chrX:34792432-34792173 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 113-371 |
| Cow position: | chrX:37986108-37986365 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 113-371 |
| Cow position: | chrX:38006889-38006631 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 57, 117 |
| Conread position: | 113-371 |
| Cow position: | chrX:41879057-41878794 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 113-371 |
| Cow position: | chrX:42492640-42492384 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 113-371 |
| Cow position: | chrX:45976795-45977066 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 113-372 |
| Cow position: | chrX:19273848-19273566 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 113-373 |
| Cow position: | chrX:616387-616117 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 113-373 |
| Cow position: | chrX:619129-618867 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 113-373 |
| Cow position: | chrX:14884083-14883813 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 113-373 |
| Cow position: | chrX:45502027-45502288 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 120 |
| Conread position: | 113-374 |
| Cow position: | chrX:14599408-14599675 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 113-375 |
| Cow position: | chrX:23091756-23092015 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 113-375 |
| Cow position: | chrX:40269363-40269636 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 113-375 |
| Cow position: | chrX:40557806-40557534 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 113-376 |
| Cow position: | chrX:32820903-32821173 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 123 |
| Conread position: | 113-376 |
| Cow position: | chrX:38066575-38066309 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 113-377 |
| Cow position: | chrX:27772086-27771824 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 113-377 |
| Cow position: | chrX:45845974-45846247 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 57, 167 |
| Conread position: | 113-383 |
| Cow position: | chrX:11073313-11073039 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 115-365 |
| Cow position: | chrX:22482809-22482557 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 115-370 |
| Cow position: | chrX:40685454-40685189 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 115-371 |
| Cow position: | chrX:33493655-33493916 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 116-359 |
| Cow position: | chrX:7721867-7722116 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 169 |
| Conread position: | 116-371 |
| Cow position: | chrX:46291014-46291284 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 137 |
| Conread position: | 118-363 |
| Cow position: | chrX:45414420-45414172 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 118-365 |
| Cow position: | chrX:37232293-37232541 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 118-368 |
| Cow position: | chrX:20584204-20584465 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 126 |
| Conread position: | 118-371 |
| Cow position: | chrX:8869522-8869261 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 118-371 |
| Cow position: | chrX:9201430-9201688 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 118-371 |
| Cow position: | chrX:13177585-13177336 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 118-373 |
| Cow position: | chrX:5118622-5118357 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 119-359 |
| Cow position: | chrX:24288043-24287805 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 119-359 |
| Cow position: | chrX:34532402-34532648 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 119-365 |
| Cow position: | chrX:7161941-7162190 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 53, 182 |
| Conread position: | 119-366 |
| Cow position: | chrX:27946178-27945919 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 119-371 |
| Cow position: | chrX:37489607-37489858 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 119-372 |
| Cow position: | chrX:9365794-9365535 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 50, 114 |
| Conread position: | 120-340 |
| Cow position: | chrX:27680281-27680507 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 120-365 |
| Cow position: | chrX:2523776-2523548 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 120-369 |
| Cow position: | chrX:5679684-5679434 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 112 |
| Conread position: | 120-371 |
| Cow position: | chrX:8730968-8731233 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 34, 186 |
| Conread position: | 120-371 |
| Cow position: | chrX:12437369-12437132 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 120-371 |
| Cow position: | chrX:35268764-35269001 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 235, 50 |
| Conread position: | 120-371 |
| Cow position: | chrX:37781229-37780969 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 120-371 |
| Cow position: | chrX:41068603-41068865 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 120-373 |
| Cow position: | chrX:17725856-17726118 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 121 |
| Conread position: | 120-374 |
| Cow position: | chrX:5638283-5638016 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 121-367 |
| Cow position: | chrX:11082731-11082486 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 121-371 |
| Cow position: | chrX:34411727-34411986 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 122-371 |
| Cow position: | chrX:878493-878240 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 122-371 |
| Cow position: | chrX:14275850-14275603 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 123-363 |
| Cow position: | chrX:23561761-23561990 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 125-365 |
| Cow position: | chrX:18695036-18694796 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 125-371 |
| Cow position: | chrX:24424501-24424261 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 125-373 |
| Cow position: | chrX:9651138-9650882 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 125-373 |
| Cow position: | chrX:17541851-17542102 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 111 |
| Conread position: | 126-371 |
| Cow position: | chrX:6407437-6407683 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 126-372 |
| Cow position: | chrX:39558462-39558209 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 128-371 |
| Cow position: | chrX:28940149-28940385 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 132-370 |
| Cow position: | chrX:169646-169407 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 134-387 |
| Cow position: | chrX:45174745-45175007 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 143-371 |
| Cow position: | chrX:38560462-38560699 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 146-370 |
| Cow position: | chrX:45648781-45649022 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 148-368 |
| Cow position: | chrX:45099035-45099265 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 149-371 |
| Cow position: | chrX:41192619-41192844 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 150-369 |
| Cow position: | chrX:20957166-20957376 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 154-371 |
| Cow position: | chrX:27306378-27306594 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 159-371 |
| Cow position: | chrX:23562556-23562772 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 182-369 |
| Cow position: | chrX:22393032-22392847 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 182-371 |
| Cow position: | chrX:29050201-29050388 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 175, 113 |
| Conread position: | 182-373 |
| Cow position: | chrX:36514940-36514750 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 49 |
| Conread position: | 182-374 |
| Cow position: | chrX:31250341-31250531 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 185-371 |
| Cow position: | chrX:1466118-1466302 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 185-373 |
| Cow position: | chrX:11326143-11325956 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 185-375 |
| Cow position: | chrX:918770-918572 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 186-363 |
| Cow position: | chrX:12082367-12082192 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 188-373 |
| Cow position: | chrX:19943279-19943094 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 189-371 |
| Cow position: | chrX:6599823-6599642 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 189-375 |
| Cow position: | chrX:19394513-19394700 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 177, 35 |
| Conread position: | 192-311 |
| Cow position: | chrX:44569048-44569164 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 192-368 |
| Cow position: | chrX:22115352-22115180 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 192-369 |
| Cow position: | chrX:19469542-19469370 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 192-371 |
| Cow position: | chrX:16984591-16984780 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 161 |
| Conread position: | 192-371 |
| Cow position: | chrX:40532080-40531903 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 192-371 |
| Cow position: | chrX:48014397-48014575 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 193-373 |
| Cow position: | chrX:4289404-4289586 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 194-371 |
| Cow position: | chrX:4153069-4152891 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 194-372 |
| Cow position: | chrX:46429856-46429678 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-374 |
| Cow position: | chrX:41941594-41941766 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 227-369 |
| Cow position: | chrX:38587847-38587705 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 233-376 |
| Cow position: | chrX:47345329-47345473 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 115, 135 |
| Conread position: | 234-371 |
| Cow position: | chrX:16836283-16836149 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 234-372 |
| Cow position: | chrX:4466970-4467108 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-363 |
| Cow position: | chrX:32943072-32942944 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-371 |
| Cow position: | chrX:27668954-27668818 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-371 |
| Cow position: | chrX:29733588-29733452 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 239-370 |
| Cow position: | chrX:4616003-4615872 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 247-370 |
| Cow position: | chrX:31479987-31480108 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 261-377 |
| Cow position: | chrX:41453332-41453448 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.