Cow genome map

Conread name: Ovi2-UMC-peov1-002-b11

Conread position: 10-314
Cow position: chr11:77436725-77437037 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 15

Conread position: 26-306
Cow position: chr11:21842518-21842227 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 152

Conread position: 26-306
Cow position: chr11:37304413-37304702 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 158

Conread position: 26-306
Cow position: chr11:38097511-38097220 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 118

Conread position: 26-310
Cow position: chr11:9432604-9432900 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 243

Conread position: 26-310
Cow position: chr11:34638275-34637978 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 18, 248

Conread position: 26-310
Cow position: chr11:40300538-40300244 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 147

Conread position: 26-310
Cow position: chr11:44893650-44893353 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 26-313
Cow position: chr11:63860415-63860115 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 248

Conread position: 26-320
Cow position: chr11:83322894-83323188 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 15

Conread position: 26-328
Cow position: chr11:1625937-1625621 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 18, 145

Conread position: 26-328
Cow position: chr11:3999280-3998985 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 35

Conread position: 26-328
Cow position: chr11:36230149-36229836 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 26-328
Cow position: chr11:45647554-45647242 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 88

Conread position: 26-328
Cow position: chr11:49099424-49099105 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 189

Conread position: 26-328
Cow position: chr11:58399553-58399866 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 26-328
Cow position: chr11:68130618-68130932 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 122

Conread position: 26-329
Cow position: chr11:259904-259583 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 26-329
Cow position: chr11:25776847-25776534 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 184, 130

Conread position: 26-329
Cow position: chr11:41577727-41577408 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 76

Conread position: 26-329
Cow position: chr11:70602054-70601739 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 26-330
Cow position: chr11:9314603-9314289 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 18, 52

Conread position: 26-330
Cow position: chr11:11450359-11450045 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 18, 52

Conread position: 26-332
Cow position: chr11:87154675-87154352 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 18, 314

Conread position: 26-342
Cow position: chr11:50191924-50191609 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 95

Conread position: 26-355
Cow position: chr11:10875001-10875332 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 26-355
Cow position: chr11:34023140-34023456 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 124

Conread position: 26-356
Cow position: chr11:26535043-26535381 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 158

Conread position: 26-357
Cow position: chr11:17781814-17781471 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 18, 167

Conread position: 26-357
Cow position: chr11:43644830-43644485 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 321

Conread position: 26-357
Cow position: chr11:64904333-64904662 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 88

Conread position: 26-357
Cow position: chr11:78990982-78990641 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 267

Conread position: 26-363
Cow position: chr11:84774392-84774740 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 27-327
Cow position: chr11:80520056-80520358 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 27-357
Cow position: chr11:67744611-67744950 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 269

Conread position: 28-309
Cow position: chr11:35738113-35737836 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 99

Conread position: 28-328
Cow position: chr11:55014718-55014408 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 64

Conread position: 29-355
Cow position: chr11:81337679-81337351 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 16, 41

Conread position: 29-369
Cow position: chr11:25184208-25184553 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 30-328
Cow position: chr11:40458411-40458718 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 65

Conread position: 30-355
Cow position: chr11:62216198-62215856 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 11, 161

Conread position: 30-361
Cow position: chr11:4625536-4625195 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 295

Conread position: 31-310
Cow position: chr11:9153020-9152734 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 98, 181

Conread position: 36-355
Cow position: chr11:77746848-77746516 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 93, 227

Conread position: 37-307
Cow position: chr11:21540024-21539761 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 59

Conread position: 38-328
Cow position: chr11:1031592-1031880 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 126

Conread position: 40-335
Cow position: chr11:9388582-9388886 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 32

Conread position: 43-300
Cow position: chr11:44131622-44131887 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 128

Conread position: 45-329
Cow position: chr11:24601255-24601551 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 58-355
Cow position: chr11:2337406-2337718 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 289

Conread position: 59-329
Cow position: chr11:15290213-15290492 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 205

Conread position: 64-336
Cow position: chr11:54668663-54668386 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 27

Conread position: 70-328
Cow position: chr11:8212103-8212373 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 59, 187

Conread position: 72-331
Cow position: chr11:75480709-75480436 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 76-328
Cow position: chr11:18911632-18911886 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 39

Conread position: 86-324
Cow position: chr11:75551745-75551496 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 203

Conread position: 92-337
Cow position: chr11:6877171-6877426 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 173

Conread position: 98-326
Cow position: chr11:42518915-42519152 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 104

Conread position: 127-357
Cow position: chr11:26118665-26118445 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 156, 91

Conread position: 128-337
Cow position: chr11:50153428-50153207 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 182

Conread position: 128-357
Cow position: chr11:51176894-51177134 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 82, 207

Conread position: 132-310
Cow position: chr11:26337552-26337367 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 28

Conread position: 135-329
Cow position: chr11:39114895-39115099 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 137-329
Cow position: chr11:25792300-25792096 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 139-357
Cow position: chr11:4610656-4610440 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 94

Conread position: 141-357
Cow position: chr11:4060625-4060404 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 35

Conread position: 141-357
Cow position: chr11:84924845-84924622 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 126

Conread position: 147-355
Cow position: chr11:39473470-39473688 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 148-328
Cow position: chr11:11319233-11319049 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 137

Conread position: 148-362
Cow position: chr11:16262649-16262428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 109

Conread position: 152-332
Cow position: chr11:68571262-68571073 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 180

Conread position: 155-357
Cow position: chr11:31574069-31574266 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 71, 108

Conread position: 165-355
Cow position: chr11:63157480-63157288 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 161

Conread position: 166-357
Cow position: chr11:48650181-48650387 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 182

Conread position: 167-356
Cow position: chr11:77029591-77029786 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 112

Conread position: 169-328
Cow position: chr11:40268034-40267865 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 111

Conread position: 182-357
Cow position: chr11:53690627-53690812 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 23

Conread position: 184-355
Cow position: chr11:65694396-65694222 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 21

Conread position: 185-357
Cow position: chr11:54134806-54134628 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 92

Conread position: 194-355
Cow position: chr11:15999852-16000011 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 18

Conread position: 196-357
Cow position: chr11:46706038-46705870 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 111

Conread position: 209-357
Cow position: chr11:55761256-55761409 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 63

Conread position: 224-355
Cow position: chr11:58614140-58614269 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 47

Conread position: 226-355
Cow position: chr11:40251115-40250986 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 100

Conread position: 226-357
Cow position: chr11:47193015-47193150 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 226-357
Cow position: chr11:72007934-72008062 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 34

Conread position: 226-357
Cow position: chr11:83403484-83403614 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 98

Conread position: 243-355
Cow position: chr11:35901511-35901622 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 89

Show alignments to all cow chromosomes.