Cow genome map


           Conread name:
           Ovi2-UMC-peov1-002-b11
        

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               16-332
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               26-296
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               18, 270
               

               Conread position:
               26-309
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               18, 257
               

               Conread position:
               26-310
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 167
               

               Conread position:
               26-310
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 268
               

               Conread position:
               26-314
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               26-315
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 147
               

               Conread position:
               26-321
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               26-327
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 159
               

               Conread position:
               26-328
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               26-328
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               26-328
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               17, 257
               

               Conread position:
               26-329
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               26-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               26-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               26-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 248
               

               Conread position:
               26-331
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               26-331
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 260
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               18, 311
               

               Conread position:
               26-340
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               26-345
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               26-354
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               26-355
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 315
               

               Conread position:
               26-357
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               26-357
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 310
               

               Conread position:
               26-357
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               18, 121
               

               Conread position:
               26-357
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               26-357
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               26-357
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               27-320
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               27-329
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               27-341
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               27-355
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               105, 136
               

               Conread position:
               27-356
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 311
               

               Conread position:
               27-359
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 131
               

               Conread position:
               28-354
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               28-355
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               28-355
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 150
               

               Conread position:
               28-355
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               28-357
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 240
               

               Conread position:
               29-329
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 145
               

               Conread position:
               30-355
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               31-357
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               37-308
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               37-320
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               37-328
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               175, 13
               

               Conread position:
               38-331
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               38-352
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               82, 90
               

               Conread position:
               38-355
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               6, 146
               

               Conread position:
               38-357
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 242
               

               Conread position:
               47-306
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               165, 74
               

               Conread position:
               48-327
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               48-359
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               50-329
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               58-357
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               61-427
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 266
               

               Conread position:
               64-328
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               148, 55
               

               Conread position:
               70-329
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               68, 61
               

               Conread position:
               70-329
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               76-320
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               85-341
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               124, 26
               

               Conread position:
               86-329
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               124, 39
               

               Conread position:
               88-310
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               43, 192
               

               Conread position:
               119-335
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               126-357
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               128-331
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               128-357
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 214
               

               Conread position:
               130-357
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               142-357
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 89
               

               Conread position:
               146-355
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               148-357
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 131
               

               Conread position:
               163-357
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               164-328
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               164-328
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               171-357
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 170
               

               Conread position:
               182-357
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               190-329
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               192-357
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               195-336
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 137
               

               Conread position:
               224-358
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               226-353
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               232-357
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               234-428
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 27
               
Show alignments to all cow chromosomes.