Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-b11 |
| Conread position: | 1-357 |
| Cow position: | chr14:24683338-24683731 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 16-332 |
| Cow position: | chr14:12243638-12243962 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 26-296 |
| Cow position: | chr14:41717045-41716762 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 18, 270 |
| Conread position: | 26-309 |
| Cow position: | chr14:48251282-48250986 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 18, 257 |
| Conread position: | 26-310 |
| Cow position: | chr14:13236645-13236349 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 26-310 |
| Cow position: | chr14:30664752-30664452 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 268 |
| Conread position: | 26-314 |
| Cow position: | chr14:41920654-41920941 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 26-315 |
| Cow position: | chr14:38436198-38436494 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 147 |
| Conread position: | 26-321 |
| Cow position: | chr14:28103455-28103150 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 26-327 |
| Cow position: | chr14:12545855-12546160 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 26-328 |
| Cow position: | chr14:7883246-7882932 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 26-328 |
| Cow position: | chr14:10310733-10311057 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-328 |
| Cow position: | chr14:49995372-49995056 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 17, 257 |
| Conread position: | 26-329 |
| Cow position: | chr14:18940573-18940883 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-329 |
| Cow position: | chr14:37180199-37179878 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-329 |
| Cow position: | chr14:44236955-44237273 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 26-329 |
| Cow position: | chr14:48828394-48828710 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 248 |
| Conread position: | 26-331 |
| Cow position: | chr14:17900221-17899898 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 26-331 |
| Cow position: | chr14:46085179-46085496 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 260 |
| Conread position: | 26-336 |
| Cow position: | chr14:44293791-44294114 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 18, 311 |
| Conread position: | 26-340 |
| Cow position: | chr14:12613402-12613718 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 26-345 |
| Cow position: | chr14:21570719-21570395 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 26-354 |
| Cow position: | chr14:43692927-43693262 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 26-355 |
| Cow position: | chr14:36109662-36109325 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 315 |
| Conread position: | 26-357 |
| Cow position: | chr14:7647298-7647630 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 26-357 |
| Cow position: | chr14:10907470-10907127 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 310 |
| Conread position: | 26-357 |
| Cow position: | chr14:13560317-13560642 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 26-357 |
| Cow position: | chr14:24836985-24837325 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 26-357 |
| Cow position: | chr14:37677549-37677875 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 26-357 |
| Cow position: | chr14:48400495-48400180 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 27-320 |
| Cow position: | chr14:40229894-40230202 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 27-329 |
| Cow position: | chr14:44382453-44382770 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 27-341 |
| Cow position: | chr14:38055980-38055673 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 27-355 |
| Cow position: | chr14:10743256-10742930 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 105, 136 |
| Conread position: | 27-356 |
| Cow position: | chr14:46983264-46983608 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 13, 311 |
| Conread position: | 27-359 |
| Cow position: | chr14:39301640-39301976 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 28-354 |
| Cow position: | chr14:26406006-26406340 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 28-355 |
| Cow position: | chr14:20396034-20396376 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 28-355 |
| Cow position: | chr14:39821905-39821576 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 150 |
| Conread position: | 28-355 |
| Cow position: | chr14:47043108-47043435 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 28-357 |
| Cow position: | chr14:19407068-19407409 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 240 |
| Conread position: | 29-329 |
| Cow position: | chr14:27844505-27844813 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 145 |
| Conread position: | 30-355 |
| Cow position: | chr14:31400324-31399992 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 31-357 |
| Cow position: | chr14:32601400-32601065 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 37-308 |
| Cow position: | chr14:1892000-1892275 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 37-320 |
| Cow position: | chr14:1802385-1802687 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 37-328 |
| Cow position: | chr14:7018900-7018607 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 175, 13 |
| Conread position: | 38-331 |
| Cow position: | chr14:13722873-13723174 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 38-352 |
| Cow position: | chr14:35604272-35604589 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 90 |
| Conread position: | 38-355 |
| Cow position: | chr14:35355035-35354710 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 6, 146 |
| Conread position: | 38-357 |
| Cow position: | chr14:12857376-12857050 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 242 |
| Conread position: | 47-306 |
| Cow position: | chr14:47593538-47593800 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 165, 74 |
| Conread position: | 48-327 |
| Cow position: | chr14:47974703-47974412 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 48-359 |
| Cow position: | chr14:19351049-19350730 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 50-329 |
| Cow position: | chr14:19189756-19189466 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 58-357 |
| Cow position: | chr14:5630895-5630592 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 61-427 |
| Cow position: | chr14:37623481-37623854 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 266 |
| Conread position: | 64-328 |
| Cow position: | chr14:26462432-26462700 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 148, 55 |
| Conread position: | 70-329 |
| Cow position: | chr14:38016750-38017023 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 70-329 |
| Cow position: | chr14:39774358-39774628 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 76-320 |
| Cow position: | chr14:7476230-7476485 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 85-341 |
| Cow position: | chr14:41770323-41770577 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 86-329 |
| Cow position: | chr14:30760881-30760636 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 88-310 |
| Cow position: | chr14:12858268-12858036 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 192 |
| Conread position: | 119-335 |
| Cow position: | chr14:41212535-41212314 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 126-357 |
| Cow position: | chr14:33581288-33581051 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 128-331 |
| Cow position: | chr14:41132062-41132277 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 128-357 |
| Cow position: | chr14:47484343-47484105 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 214 |
| Conread position: | 130-357 |
| Cow position: | chr14:48517700-48517465 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 142-357 |
| Cow position: | chr14:20068904-20069115 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 146-355 |
| Cow position: | chr14:41719518-41719733 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 148-357 |
| Cow position: | chr14:8488810-8488594 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 163-357 |
| Cow position: | chr14:46304695-46304901 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 164-328 |
| Cow position: | chr14:22689554-22689379 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 164-328 |
| Cow position: | chr14:40462174-40461999 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 171-357 |
| Cow position: | chr14:23818523-23818717 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 170 |
| Conread position: | 182-357 |
| Cow position: | chr14:18448422-18448606 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 190-329 |
| Cow position: | chr14:42259777-42259926 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 192-357 |
| Cow position: | chr14:19887483-19887655 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 195-336 |
| Cow position: | chr14:27792106-27791956 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 137 |
| Conread position: | 224-358 |
| Cow position: | chr14:44860421-44860552 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 226-353 |
| Cow position: | chr14:39877075-39877204 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 232-357 |
| Cow position: | chr14:5169599-5169734 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 234-428 |
| Cow position: | chr14:37257772-37257965 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 44, 27 |
Show alignments to all cow chromosomes.