Cow genome map
Conread name: | Ovi2-UMC-peov1-002-b11 |
Conread position: | 25-329 |
Cow position: | chr18:4858626-4858310 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 226 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 20, 39 |
Conread position: | 26-309 |
Cow position: | chr18:26822210-26822506 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 91 |
Conread position: | 26-309 |
Cow position: | chr18:38157933-38157642 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 208 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 18, 147 |
Conread position: | 26-310 |
Cow position: | chr18:29072030-29072327 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 244 |
Conread position: | 26-328 |
Cow position: | chr18:7649263-7649575 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 232 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 18, 87 |
Conread position: | 26-328 |
Cow position: | chr18:33851155-33851467 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 229 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 26-329 |
Cow position: | chr18:601892-601587 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 219 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 115, 19 |
Conread position: | 26-343 |
Cow position: | chr18:8988607-8988939 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 17, 245 |
Conread position: | 26-353 |
Cow position: | chr18:17335128-17334796 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 68 |
Conread position: | 26-355 |
Cow position: | chr18:21767985-21767643 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 146 |
Conread position: | 26-355 |
Cow position: | chr18:43563493-43563829 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 236 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 18, 69 |
Conread position: | 26-355 |
Cow position: | chr18:48548428-48548763 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 143 |
Conread position: | 26-357 |
Cow position: | chr18:36477398-36477755 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 255 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 14, 191 |
Conread position: | 26-357 |
Cow position: | chr18:36649002-36649331 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 239 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 15, 143 |
Conread position: | 26-357 |
Cow position: | chr18:36907912-36907565 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 19 |
Conread position: | 26-357 |
Cow position: | chr18:36912438-36912091 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 19 |
Conread position: | 26-357 |
Cow position: | chr18:49781672-49781338 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 242 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 18, 141 |
Conread position: | 26-357 |
Cow position: | chr18:51272524-51272179 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 83 |
Conread position: | 26-380 |
Cow position: | chr18:12200760-12200405 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 255 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 18, 78 |
Conread position: | 27-329 |
Cow position: | chr18:42966104-42966421 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 27-354 |
Cow position: | chr18:54059237-54058892 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 27-355 |
Cow position: | chr18:43464156-43463818 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 307 |
Conread position: | 28-341 |
Cow position: | chr18:38341927-38341607 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 103 |
Conread position: | 28-356 |
Cow position: | chr18:31563328-31562987 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 86 |
Conread position: | 28-357 |
Cow position: | chr18:32908173-32908506 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 11 |
Conread position: | 29-340 |
Cow position: | chr18:42080403-42080078 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 46 |
Conread position: | 29-356 |
Cow position: | chr18:35013035-35012695 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 95 |
Conread position: | 29-357 |
Cow position: | chr18:24293135-24293463 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 137 |
Conread position: | 30-309 |
Cow position: | chr18:40484617-40484906 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 213 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 14, 91 |
Conread position: | 30-357 |
Cow position: | chr18:25972458-25972122 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 50 |
Conread position: | 36-329 |
Cow position: | chr18:54861366-54861068 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 200 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 94, 105 |
Conread position: | 38-322 |
Cow position: | chr18:10862130-10861835 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 212 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 87, 125 |
Conread position: | 38-337 |
Cow position: | chr18:19116179-19115867 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 213 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 38-355 |
Cow position: | chr18:21304132-21304456 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 294 |
Conread position: | 39-329 |
Cow position: | chr18:6878345-6878044 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 40-365 |
Cow position: | chr18:45614407-45614738 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 124 |
Conread position: | 41-357 |
Cow position: | chr18:10100737-10101067 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 43-324 |
Cow position: | chr18:29059184-29058903 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 199 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 167, 84 |
Conread position: | 44-365 |
Cow position: | chr18:268762-268438 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 70 |
Conread position: | 45-357 |
Cow position: | chr18:29768198-29768517 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 295 |
Conread position: | 47-310 |
Cow position: | chr18:32283158-32283439 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 197 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 82, 249 |
Conread position: | 47-310 |
Cow position: | chr18:32284677-32284958 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 197 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 82, 249 |
Conread position: | 47-310 |
Cow position: | chr18:32300823-32301103 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 196 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 82, 248 |
Conread position: | 53-395 |
Cow position: | chr18:13508439-13508088 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 252 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 48, 77 |
Conread position: | 58-357 |
Cow position: | chr18:33274597-33274897 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 228 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 139, 70 |
Conread position: | 62-356 |
Cow position: | chr18:20226828-20226544 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 208 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 67, 126 |
Conread position: | 64-332 |
Cow position: | chr18:27457446-27457169 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 68, 82 |
Conread position: | 76-357 |
Cow position: | chr18:11190733-11191023 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 204 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 51, 26 |
Conread position: | 80-310 |
Cow position: | chr18:27555231-27554991 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 52, 200 |
Conread position: | 81-357 |
Cow position: | chr18:10097483-10097769 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 85-357 |
Cow position: | chr18:36458248-36458537 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 206 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 44, 255 |
Conread position: | 91-334 |
Cow position: | chr18:7955482-7955735 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 183 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 38, 180 |
Conread position: | 120-355 |
Cow position: | chr18:22874228-22874473 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 189 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 9, 223 |
Conread position: | 128-328 |
Cow position: | chr18:49059072-49059281 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 144 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 128-355 |
Cow position: | chr18:2439376-2439130 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 87, 152 |
Conread position: | 128-357 |
Cow position: | chr18:249512-249271 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 179 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 135-355 |
Cow position: | chr18:21106770-21106551 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 75, 143 |
Conread position: | 140-357 |
Cow position: | chr18:4579109-4578891 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 172 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 70, 24 |
Conread position: | 156-328 |
Cow position: | chr18:28292359-28292176 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 165-328 |
Cow position: | chr18:21265874-21266046 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 45, 99 |
Conread position: | 166-354 |
Cow position: | chr18:22065958-22065761 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 39, 14 |
Conread position: | 169-355 |
Cow position: | chr18:34020831-34021025 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 43, 102 |
Conread position: | 171-357 |
Cow position: | chr18:55697614-55697412 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 158 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 39, 24 |
Conread position: | 173-325 |
Cow position: | chr18:10663110-10663272 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 173-329 |
Cow position: | chr18:47985761-47985927 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 186-329 |
Cow position: | chr18:45104997-45104844 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 189-329 |
Cow position: | chr18:11680124-11680273 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 23, 90 |
Conread position: | 226-355 |
Cow position: | chr18:40203315-40203190 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 58, 45 |
Conread position: | 226-355 |
Cow position: | chr18:54031183-54031312 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 57, 98 |
Conread position: | 228-351 |
Cow position: | chr18:41072340-41072465 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.