Cow genome map

Conread name: Ovi2-UMC-peov1-002-b11

Conread position: 25-329
Cow position: chr18:4858626-4858310 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 20, 39

Conread position: 26-309
Cow position: chr18:26822210-26822506 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 91

Conread position: 26-309
Cow position: chr18:38157933-38157642 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 147

Conread position: 26-310
Cow position: chr18:29072030-29072327 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 244

Conread position: 26-328
Cow position: chr18:7649263-7649575 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 87

Conread position: 26-328
Cow position: chr18:33851155-33851467 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 132

Conread position: 26-329
Cow position: chr18:601892-601587 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 115, 19

Conread position: 26-343
Cow position: chr18:8988607-8988939 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 17, 245

Conread position: 26-353
Cow position: chr18:17335128-17334796 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 68

Conread position: 26-355
Cow position: chr18:21767985-21767643 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 146

Conread position: 26-355
Cow position: chr18:43563493-43563829 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 69

Conread position: 26-355
Cow position: chr18:48548428-48548763 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 143

Conread position: 26-357
Cow position: chr18:36477398-36477755 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 14, 191

Conread position: 26-357
Cow position: chr18:36649002-36649331 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 143

Conread position: 26-357
Cow position: chr18:36907912-36907565 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 26-357
Cow position: chr18:36912438-36912091 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 26-357
Cow position: chr18:49781672-49781338 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 141

Conread position: 26-357
Cow position: chr18:51272524-51272179 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 83

Conread position: 26-380
Cow position: chr18:12200760-12200405 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 78

Conread position: 27-329
Cow position: chr18:42966104-42966421 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 27-354
Cow position: chr18:54059237-54058892 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 27-355
Cow position: chr18:43464156-43463818 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 307

Conread position: 28-341
Cow position: chr18:38341927-38341607 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 103

Conread position: 28-356
Cow position: chr18:31563328-31562987 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 86

Conread position: 28-357
Cow position: chr18:32908173-32908506 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 11

Conread position: 29-340
Cow position: chr18:42080403-42080078 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 29-356
Cow position: chr18:35013035-35012695 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 29-357
Cow position: chr18:24293135-24293463 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 137

Conread position: 30-309
Cow position: chr18:40484617-40484906 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 91

Conread position: 30-357
Cow position: chr18:25972458-25972122 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 50

Conread position: 36-329
Cow position: chr18:54861366-54861068 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 105

Conread position: 38-322
Cow position: chr18:10862130-10861835 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 125

Conread position: 38-337
Cow position: chr18:19116179-19115867 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 38-355
Cow position: chr18:21304132-21304456 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 294

Conread position: 39-329
Cow position: chr18:6878345-6878044 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 40-365
Cow position: chr18:45614407-45614738 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 124

Conread position: 41-357
Cow position: chr18:10100737-10101067 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 43-324
Cow position: chr18:29059184-29058903 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 167, 84

Conread position: 44-365
Cow position: chr18:268762-268438 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 70

Conread position: 45-357
Cow position: chr18:29768198-29768517 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 295

Conread position: 47-310
Cow position: chr18:32283158-32283439 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 82, 249

Conread position: 47-310
Cow position: chr18:32284677-32284958 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 82, 249

Conread position: 47-310
Cow position: chr18:32300823-32301103 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 82, 248

Conread position: 53-395
Cow position: chr18:13508439-13508088 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 77

Conread position: 58-357
Cow position: chr18:33274597-33274897 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 139, 70

Conread position: 62-356
Cow position: chr18:20226828-20226544 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 126

Conread position: 64-332
Cow position: chr18:27457446-27457169 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 68, 82

Conread position: 76-357
Cow position: chr18:11190733-11191023 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 26

Conread position: 80-310
Cow position: chr18:27555231-27554991 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 200

Conread position: 81-357
Cow position: chr18:10097483-10097769 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 85-357
Cow position: chr18:36458248-36458537 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 255

Conread position: 91-334
Cow position: chr18:7955482-7955735 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 180

Conread position: 120-355
Cow position: chr18:22874228-22874473 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 9, 223

Conread position: 128-328
Cow position: chr18:49059072-49059281 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 128-355
Cow position: chr18:2439376-2439130 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 152

Conread position: 128-357
Cow position: chr18:249512-249271 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 18

Conread position: 135-355
Cow position: chr18:21106770-21106551 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 143

Conread position: 140-357
Cow position: chr18:4579109-4578891 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 24

Conread position: 156-328
Cow position: chr18:28292359-28292176 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 165-328
Cow position: chr18:21265874-21266046 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 99

Conread position: 166-354
Cow position: chr18:22065958-22065761 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 14

Conread position: 169-355
Cow position: chr18:34020831-34021025 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 102

Conread position: 171-357
Cow position: chr18:55697614-55697412 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 24

Conread position: 173-325
Cow position: chr18:10663110-10663272 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 173-329
Cow position: chr18:47985761-47985927 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 186-329
Cow position: chr18:45104997-45104844 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 189-329
Cow position: chr18:11680124-11680273 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 90

Conread position: 226-355
Cow position: chr18:40203315-40203190 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 45

Conread position: 226-355
Cow position: chr18:54031183-54031312 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 98

Conread position: 228-351
Cow position: chr18:41072340-41072465 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.