Cow genome map

Conread name: Ovi2-UMC-peov1-002-b11

Conread position: 26-309
Cow position: chr19:53824526-53824822 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 276

Conread position: 26-310
Cow position: chr19:1169303-1169006 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 26-320
Cow position: chr19:1486139-1485830 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 26-328
Cow position: chr19:33586247-33585932 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 131

Conread position: 26-336
Cow position: chr19:19501072-19500751 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 91

Conread position: 26-345
Cow position: chr19:24688582-24688901 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 43

Conread position: 26-346
Cow position: chr19:28015361-28015678 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 145

Conread position: 26-353
Cow position: chr19:12375751-12375423 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 124

Conread position: 26-355
Cow position: chr19:471063-471395 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 38

Conread position: 26-357
Cow position: chr19:2820871-2821202 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 17, 157

Conread position: 26-357
Cow position: chr19:15766397-15766732 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 69

Conread position: 26-357
Cow position: chr19:26976706-26976382 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 48

Conread position: 26-357
Cow position: chr19:30937598-30937257 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 257

Conread position: 26-357
Cow position: chr19:39877230-39876891 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 170

Conread position: 26-357
Cow position: chr19:42274607-42274264 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 252

Conread position: 26-357
Cow position: chr19:46873405-46873068 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 26-357
Cow position: chr19:50561682-50562023 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 256

Conread position: 27-328
Cow position: chr19:21200874-21201180 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 105, 134

Conread position: 27-357
Cow position: chr19:9704568-9704230 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 100

Conread position: 28-350
Cow position: chr19:13447608-13447940 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 315

Conread position: 28-357
Cow position: chr19:6556238-6556574 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 28-357
Cow position: chr19:12787665-12788004 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 87

Conread position: 30-329
Cow position: chr19:48697911-48698214 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 117, 101

Conread position: 30-360
Cow position: chr19:10206598-10206934 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 97

Conread position: 36-326
Cow position: chr19:24085375-24085662 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 170, 27

Conread position: 37-322
Cow position: chr19:40883897-40883603 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 55

Conread position: 38-355
Cow position: chr19:2341561-2341230 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 91, 278

Conread position: 46-328
Cow position: chr19:3496899-3496598 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 213

Conread position: 62-356
Cow position: chr19:40683951-40684249 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 148, 102

Conread position: 62-357
Cow position: chr19:33280696-33281001 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 30

Conread position: 66-356
Cow position: chr19:11616510-11616212 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 67, 95

Conread position: 82-310
Cow position: chr19:7622-7863 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 191

Conread position: 82-337
Cow position: chr19:7190258-7189993 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 95-327
Cow position: chr19:18358413-18358170 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 76

Conread position: 97-329
Cow position: chr19:39245280-39245522 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 96

Conread position: 100-329
Cow position: chr19:56150679-56150453 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 10

Conread position: 111-355
Cow position: chr19:43066515-43066768 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 232

Conread position: 118-332
Cow position: chr19:35429443-35429666 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 22

Conread position: 119-356
Cow position: chr19:32141726-32141978 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 10, 146

Conread position: 131-355
Cow position: chr19:38545096-38545325 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 32

Conread position: 143-366
Cow position: chr19:31721051-31721278 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 41

Conread position: 156-327
Cow position: chr19:42694432-42694614 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 161-329
Cow position: chr19:34282761-34282940 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 164-357
Cow position: chr19:47187737-47187538 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 86

Conread position: 166-361
Cow position: chr19:43733168-43733369 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 103

Conread position: 171-343
Cow position: chr19:35954334-35954513 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 14

Conread position: 171-357
Cow position: chr19:25638060-25637867 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 162

Conread position: 184-328
Cow position: chr19:55246896-55247051 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 184-355
Cow position: chr19:29471028-29471204 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 156

Conread position: 186-355
Cow position: chr19:23908695-23908518 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 139

Conread position: 189-310
Cow position: chr19:37633890-37633759 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 226-357
Cow position: chr19:35782620-35782489 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 98

Conread position: 226-357
Cow position: chr19:49358882-49358752 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 106

Show alignments to all cow chromosomes.