Cow genome map

Conread name: Ovi2-UMC-peov1-002-b11

Conread position: 6-329
Cow position: chr22:31700837-31700500 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 38, 21

Conread position: 23-329
Cow position: chr22:1036381-1036701 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 21, 78

Conread position: 26-309
Cow position: chr22:19600282-19599988 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 18, 245

Conread position: 26-309
Cow position: chr22:28785630-28785926 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 257

Conread position: 26-309
Cow position: chr22:37829799-37829503 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 257

Conread position: 26-310
Cow position: chr22:4220301-4220012 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 32

Conread position: 26-310
Cow position: chr22:16203315-16203608 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 152

Conread position: 26-314
Cow position: chr22:8720331-8720051 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 18

Conread position: 26-314
Cow position: chr22:17893015-17892719 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 32

Conread position: 26-328
Cow position: chr22:8839900-8840208 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 105

Conread position: 26-328
Cow position: chr22:25912232-25912543 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 16, 103

Conread position: 26-328
Cow position: chr22:41846050-41845736 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 68

Conread position: 26-329
Cow position: chr22:1266639-1266327 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 38

Conread position: 26-329
Cow position: chr22:8417770-8418082 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 32

Conread position: 26-329
Cow position: chr22:31593746-31593431 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 138

Conread position: 26-329
Cow position: chr22:33093856-33094173 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 26-331
Cow position: chr22:11837903-11837587 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 137

Conread position: 26-331
Cow position: chr22:18233390-18233705 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 72, 151

Conread position: 26-332
Cow position: chr22:11698125-11697808 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 109

Conread position: 26-332
Cow position: chr22:31870953-31870637 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 184

Conread position: 26-335
Cow position: chr22:47698826-47698511 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 66

Conread position: 26-336
Cow position: chr22:13017488-13017163 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 38

Conread position: 26-352
Cow position: chr22:5929389-5929059 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 199

Conread position: 26-353
Cow position: chr22:27790728-27791063 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 26-355
Cow position: chr22:30918587-30918918 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 26-356
Cow position: chr22:10650356-10650025 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 92

Conread position: 26-356
Cow position: chr22:23582295-23581952 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 8, 20

Conread position: 26-357
Cow position: chr22:39038859-39038516 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 121

Conread position: 26-357
Cow position: chr22:43261381-43261721 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 70

Conread position: 26-357
Cow position: chr22:46439807-46439468 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 124

Conread position: 27-310
Cow position: chr22:28130256-28130554 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 90

Conread position: 27-328
Cow position: chr22:5930813-5930496 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 27-355
Cow position: chr22:33798491-33798152 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 54

Conread position: 27-355
Cow position: chr22:42604931-42605267 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 316

Conread position: 27-357
Cow position: chr22:24031677-24031344 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 53

Conread position: 28-328
Cow position: chr22:30364356-30364671 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 89

Conread position: 28-354
Cow position: chr22:23618987-23618657 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 103

Conread position: 28-357
Cow position: chr22:7302553-7302212 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 317

Conread position: 30-357
Cow position: chr22:41470105-41469773 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 57

Conread position: 37-357
Cow position: chr22:24818897-24819220 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 92, 110

Conread position: 38-328
Cow position: chr22:9119192-9119487 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 16

Conread position: 38-328
Cow position: chr22:36193183-36193481 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 130

Conread position: 38-328
Cow position: chr22:41353767-41353472 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 89, 55

Conread position: 38-336
Cow position: chr22:14893974-14894287 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 132

Conread position: 38-355
Cow position: chr22:47905882-47906207 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 294

Conread position: 38-357
Cow position: chr22:5624109-5623783 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 83

Conread position: 40-329
Cow position: chr22:39133396-39133695 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 157

Conread position: 40-357
Cow position: chr22:2070281-2070608 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 41-339
Cow position: chr22:34665368-34665677 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 7, 155

Conread position: 41-355
Cow position: chr22:25456569-25456888 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 88, 100

Conread position: 41-357
Cow position: chr22:9465851-9466171 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 124

Conread position: 44-340
Cow position: chr22:4638206-4637926 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 240, 59

Conread position: 44-356
Cow position: chr22:26184851-26184529 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 47-336
Cow position: chr22:43788817-43788524 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 47-361
Cow position: chr22:41387932-41388252 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 82, 212

Conread position: 55-310
Cow position: chr22:12569971-12569701 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 220

Conread position: 55-372
Cow position: chr22:30573801-30573481 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 17

Conread position: 58-329
Cow position: chr22:14639087-14638806 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 58

Conread position: 63-310
Cow position: chr22:27284995-27285252 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 67, 205

Conread position: 63-337
Cow position: chr22:36575489-36575206 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 230

Conread position: 64-355
Cow position: chr22:17677244-17677535 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 187

Conread position: 66-337
Cow position: chr22:25942821-25943106 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 77

Conread position: 68-357
Cow position: chr22:27223334-27223036 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 264

Conread position: 70-356
Cow position: chr22:26081561-26081257 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 75-357
Cow position: chr22:39451908-39452211 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 54, 265

Conread position: 76-355
Cow position: chr22:42934148-42933857 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 269

Conread position: 76-357
Cow position: chr22:26321778-26322077 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 77-329
Cow position: chr22:2624201-2623933 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 87

Conread position: 83-357
Cow position: chr22:44515370-44515097 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 149

Conread position: 85-356
Cow position: chr22:6567276-6566999 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 176

Conread position: 87-327
Cow position: chr22:47866961-47867209 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 24

Conread position: 92-335
Cow position: chr22:10314469-10314710 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 33

Conread position: 99-310
Cow position: chr22:18121602-18121382 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 101-310
Cow position: chr22:21331071-21330853 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 10

Conread position: 103-357
Cow position: chr22:40590273-40590527 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 175

Conread position: 119-380
Cow position: chr22:7101973-7102243 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 223

Conread position: 126-329
Cow position: chr22:13696018-13695804 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 198

Conread position: 128-336
Cow position: chr22:28352278-28352062 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 138

Conread position: 129-357
Cow position: chr22:21935623-21935857 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 85, 210

Conread position: 132-355
Cow position: chr22:13186886-13187116 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 128

Conread position: 139-336
Cow position: chr22:11612840-11613046 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 193

Conread position: 139-336
Cow position: chr22:30954452-30954657 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 140

Conread position: 142-356
Cow position: chr22:5716850-5717070 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 149

Conread position: 151-328
Cow position: chr22:10415340-10415527 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 19

Conread position: 151-355
Cow position: chr22:15929555-15929344 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 29

Conread position: 153-357
Cow position: chr22:13234962-13235168 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 57, 115

Conread position: 155-357
Cow position: chr22:31497682-31497471 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 27, 177

Conread position: 156-329
Cow position: chr22:39601917-39602100 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 156-357
Cow position: chr22:26507115-26506906 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 38

Conread position: 164-332
Cow position: chr22:779817-779993 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 159

Conread position: 171-345
Cow position: chr22:15934167-15933984 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 72

Conread position: 171-357
Cow position: chr22:19591848-19592043 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 94

Conread position: 184-331
Cow position: chr22:27510991-27511144 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 196-357
Cow position: chr22:41045456-41045282 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 244-357
Cow position: chr22:31513637-31513525 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 73

Show alignments to all cow chromosomes.