Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-b11 |
| Conread position: | 26-310 |
| Cow position: | chr23:954288-953991 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 265 |
| Conread position: | 26-310 |
| Cow position: | chr23:7311174-7311470 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 26-310 |
| Cow position: | chr23:19056849-19056552 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 18, 258 |
| Conread position: | 26-312 |
| Cow position: | chr23:3286271-3286557 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 26-328 |
| Cow position: | chr23:26828761-26829072 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 26-328 |
| Cow position: | chr23:31423331-31423016 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 234 |
| Conread position: | 26-329 |
| Cow position: | chr23:1321884-1321572 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 26-329 |
| Cow position: | chr23:7359968-7360283 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 26-329 |
| Cow position: | chr23:30243995-30244308 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 26-330 |
| Cow position: | chr23:25665305-25664993 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 26-331 |
| Cow position: | chr23:20025445-20025772 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 279 |
| Conread position: | 26-332 |
| Cow position: | chr23:6720971-6720657 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 26-332 |
| Cow position: | chr23:7374194-7374501 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 26-335 |
| Cow position: | chr23:10013847-10014169 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 18, 258 |
| Conread position: | 26-336 |
| Cow position: | chr23:29459762-29459450 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 26-339 |
| Cow position: | chr23:6070915-6070605 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 189 |
| Conread position: | 26-345 |
| Cow position: | chr23:9712298-9711976 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 26-355 |
| Cow position: | chr23:2032904-2033256 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-356 |
| Cow position: | chr23:11814350-11814005 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 322 |
| Conread position: | 26-357 |
| Cow position: | chr23:16057202-16057541 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 210 |
| Conread position: | 26-357 |
| Cow position: | chr23:16238066-16237719 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 26-357 |
| Cow position: | chr23:23192924-23192596 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 26-357 |
| Cow position: | chr23:29271402-29271741 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 26-379 |
| Cow position: | chr23:11405173-11404813 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 29-330 |
| Cow position: | chr23:10960470-10960787 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 30-331 |
| Cow position: | chr23:36308722-36309036 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 30-355 |
| Cow position: | chr23:25565510-25565837 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 31-355 |
| Cow position: | chr23:9733702-9734038 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 34-338 |
| Cow position: | chr23:40825315-40825620 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 37-330 |
| Cow position: | chr23:38849960-38849662 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 38-328 |
| Cow position: | chr23:7265889-7265598 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 125 |
| Conread position: | 39-329 |
| Cow position: | chr23:10852371-10852672 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 39-355 |
| Cow position: | chr23:21395281-21394960 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 43-343 |
| Cow position: | chr23:31395598-31395306 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 86, 96 |
| Conread position: | 49-366 |
| Cow position: | chr23:9393356-9393030 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 283 |
| Conread position: | 76-310 |
| Cow position: | chr23:14575777-14576022 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 77-354 |
| Cow position: | chr23:21276877-21276595 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 53, 216 |
| Conread position: | 83-337 |
| Cow position: | chr23:30211146-30210880 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 94-357 |
| Cow position: | chr23:9642040-9641779 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 105-328 |
| Cow position: | chr23:1745068-1745299 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 119-306 |
| Cow position: | chr23:1009985-1009805 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 127-350 |
| Cow position: | chr23:20724602-20724829 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 128-357 |
| Cow position: | chr23:30656750-30656520 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 52 |
| Conread position: | 138-341 |
| Cow position: | chr23:14566316-14566102 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 77, 206 |
| Conread position: | 138-355 |
| Cow position: | chr23:7289962-7289738 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 138-355 |
| Cow position: | chr23:20586304-20586077 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 140-387 |
| Cow position: | chr23:36462901-36462648 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 143-380 |
| Cow position: | chr23:18371483-18371247 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 148-355 |
| Cow position: | chr23:7252580-7252784 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 156-310 |
| Cow position: | chr23:20980280-20980444 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 156-363 |
| Cow position: | chr23:25554446-25554656 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 185-355 |
| Cow position: | chr23:16170156-16170332 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 185-357 |
| Cow position: | chr23:37191121-37190939 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 27, 143 |
| Conread position: | 185-357 |
| Cow position: | chr23:40861815-40861997 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 189-353 |
| Cow position: | chr23:14945153-14944981 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 197-357 |
| Cow position: | chr23:13359068-13359225 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 224-357 |
| Cow position: | chr23:8930827-8930696 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 227-357 |
| Cow position: | chr23:11564843-11564713 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 230-361 |
| Cow position: | chr23:497090-496958 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 231-357 |
| Cow position: | chr23:3745125-3745250 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 101 |
Show alignments to all cow chromosomes.