Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-b11 |
| Conread position: | 26-309 |
| Cow position: | chr24:14378896-14378601 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 19, 230 |
| Conread position: | 26-309 |
| Cow position: | chr24:22975413-22975707 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 266 |
| Conread position: | 26-310 |
| Cow position: | chr24:3851200-3851497 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 251 |
| Conread position: | 26-310 |
| Cow position: | chr24:5910424-5910723 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 26-310 |
| Cow position: | chr24:40272447-40272744 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 257 |
| Conread position: | 26-314 |
| Cow position: | chr24:6325767-6325465 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-319 |
| Cow position: | chr24:35568451-35568756 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 259 |
| Conread position: | 26-320 |
| Cow position: | chr24:27632670-27632971 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 26-324 |
| Cow position: | chr24:35503378-35503070 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 26-328 |
| Cow position: | chr24:29190888-29191205 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-329 |
| Cow position: | chr24:29064364-29064052 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 26-329 |
| Cow position: | chr24:33291885-33291582 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 26-330 |
| Cow position: | chr24:6415767-6416084 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 251 |
| Conread position: | 26-331 |
| Cow position: | chr24:19466654-19466340 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 26-343 |
| Cow position: | chr24:27905711-27906031 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 26-352 |
| Cow position: | chr24:17764009-17763658 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 332 |
| Conread position: | 26-357 |
| Cow position: | chr24:17412026-17412363 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 26-357 |
| Cow position: | chr24:26846998-26846667 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 26-357 |
| Cow position: | chr24:29680027-29679690 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 26-365 |
| Cow position: | chr24:25677311-25677652 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 26-396 |
| Cow position: | chr24:29130957-29130567 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 330 |
| Conread position: | 27-281 |
| Cow position: | chr24:30765927-30766179 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 27-355 |
| Cow position: | chr24:27761665-27761999 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 30-357 |
| Cow position: | chr24:25245314-25245649 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 32-357 |
| Cow position: | chr24:39500996-39500667 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 33-357 |
| Cow position: | chr24:16243352-16243023 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 38-305 |
| Cow position: | chr24:32740309-32740032 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 92, 243 |
| Conread position: | 38-322 |
| Cow position: | chr24:29179981-29180261 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 174, 76 |
| Conread position: | 38-328 |
| Cow position: | chr24:19815795-19815493 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 38-357 |
| Cow position: | chr24:15372408-15372734 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 118 |
| Conread position: | 40-329 |
| Cow position: | chr24:29170282-29170567 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 121 |
| Conread position: | 40-357 |
| Cow position: | chr24:16268943-16268621 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 40-357 |
| Cow position: | chr24:28723717-28724046 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 130 |
| Conread position: | 45-328 |
| Cow position: | chr24:25991855-25991572 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 48-357 |
| Cow position: | chr24:41333590-41333266 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 54-357 |
| Cow position: | chr24:19782422-19782727 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 60-357 |
| Cow position: | chr24:43733098-43733401 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 155, 12 |
| Conread position: | 65-355 |
| Cow position: | chr24:39123075-39123355 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 84 |
| Conread position: | 70-326 |
| Cow position: | chr24:39258468-39258728 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 245 |
| Conread position: | 76-329 |
| Cow position: | chr24:19324139-19323885 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 77-343 |
| Cow position: | chr24:6141622-6141353 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 88 |
| Conread position: | 87-357 |
| Cow position: | chr24:30484593-30484323 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 90-331 |
| Cow position: | chr24:33622142-33621893 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 101-357 |
| Cow position: | chr24:8886234-8886499 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 103-337 |
| Cow position: | chr24:24495940-24496190 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 128-357 |
| Cow position: | chr24:18075517-18075750 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 130-357 |
| Cow position: | chr24:15036455-15036685 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 132-357 |
| Cow position: | chr24:39681249-39681481 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 78, 199 |
| Conread position: | 137-356 |
| Cow position: | chr24:5422931-5422703 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 140-306 |
| Cow position: | chr24:18839919-18839745 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 142-310 |
| Cow position: | chr24:6436187-6436364 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 159 |
| Conread position: | 150-328 |
| Cow position: | chr24:28497421-28497234 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 153-357 |
| Cow position: | chr24:39955882-39955669 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 189 |
| Conread position: | 156-328 |
| Cow position: | chr24:6149444-6149624 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 156-357 |
| Cow position: | chr24:32070070-32070279 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 54, 185 |
| Conread position: | 161-330 |
| Cow position: | chr24:6341575-6341758 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 163-355 |
| Cow position: | chr24:36345445-36345245 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 178 |
| Conread position: | 164-357 |
| Cow position: | chr24:40056304-40056104 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 169 |
| Conread position: | 182-357 |
| Cow position: | chr24:32158835-32158656 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 129 |
| Conread position: | 185-364 |
| Cow position: | chr24:13784098-13783912 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 156 |
| Conread position: | 189-328 |
| Cow position: | chr24:29073236-29073086 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 193-361 |
| Cow position: | chr24:40213644-40213460 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 211-355 |
| Cow position: | chr24:16897380-16897230 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 226-357 |
| Cow position: | chr24:14336802-14336931 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.