Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-b11 |
| Conread position: | 26-327 |
| Cow position: | chr25:2135661-2135977 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 26-328 |
| Cow position: | chr25:13429814-13429511 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 26-328 |
| Cow position: | chr25:16922490-16922180 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 85 |
| Conread position: | 26-328 |
| Cow position: | chr25:41356499-41356184 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 26-329 |
| Cow position: | chr25:4522513-4522204 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 26-329 |
| Cow position: | chr25:11584812-11585126 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-329 |
| Cow position: | chr25:23394164-23394480 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 244 |
| Conread position: | 26-330 |
| Cow position: | chr25:10012757-10012441 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 26-337 |
| Cow position: | chr25:27504866-27504552 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 26-337 |
| Cow position: | chr25:30526072-30525749 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-353 |
| Cow position: | chr25:23672561-23672244 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 26-353 |
| Cow position: | chr25:23739936-23739619 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 26-355 |
| Cow position: | chr25:18424600-18424921 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 26-355 |
| Cow position: | chr25:21903739-21904074 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 26-355 |
| Cow position: | chr25:28264648-28264982 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-355 |
| Cow position: | chr25:32607217-32606884 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 26-356 |
| Cow position: | chr25:21562656-21562317 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 26-357 |
| Cow position: | chr25:8080169-8080492 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 26-357 |
| Cow position: | chr25:11929261-11928923 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 26-357 |
| Cow position: | chr25:24228043-24227707 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 141 |
| Conread position: | 26-358 |
| Cow position: | chr25:14569665-14570001 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 27-355 |
| Cow position: | chr25:38190239-38190575 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 138 |
| Conread position: | 28-362 |
| Cow position: | chr25:23772973-23772631 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 157 |
| Conread position: | 29-353 |
| Cow position: | chr25:34237291-34236951 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 38-329 |
| Cow position: | chr25:36747126-36746833 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 76 |
| Conread position: | 39-339 |
| Cow position: | chr25:21565424-21565121 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 40-329 |
| Cow position: | chr25:27531941-27531652 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 85, 181 |
| Conread position: | 40-357 |
| Cow position: | chr25:24137140-24136810 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 45-357 |
| Cow position: | chr25:13332736-13333059 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 291 |
| Conread position: | 46-357 |
| Cow position: | chr25:18448166-18448471 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 166, 20 |
| Conread position: | 53-340 |
| Cow position: | chr25:10137154-10137454 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 62-357 |
| Cow position: | chr25:23409993-23410298 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 281 |
| Conread position: | 83-357 |
| Cow position: | chr25:23914291-23914580 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 97-310 |
| Cow position: | chr25:13962177-13962403 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 128-329 |
| Cow position: | chr25:14625527-14625320 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 167 |
| Conread position: | 128-357 |
| Cow position: | chr25:29351580-29351338 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 152 |
| Conread position: | 129-332 |
| Cow position: | chr25:5823870-5824083 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 139 |
| Conread position: | 130-329 |
| Cow position: | chr25:9178830-9178619 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 139-332 |
| Cow position: | chr25:10408010-10407803 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 196 |
| Conread position: | 139-341 |
| Cow position: | chr25:27535521-27535315 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 146-327 |
| Cow position: | chr25:13815768-13815577 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 150-357 |
| Cow position: | chr25:20075922-20076132 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 121 |
| Conread position: | 153-355 |
| Cow position: | chr25:20394626-20394838 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 154-354 |
| Cow position: | chr25:36887102-36886901 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 169-314 |
| Cow position: | chr25:4336974-4337128 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 171-332 |
| Cow position: | chr25:27510817-27510645 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 161 |
| Conread position: | 181-357 |
| Cow position: | chr25:18250211-18250026 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 196-331 |
| Cow position: | chr25:26111754-26111899 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 230-356 |
| Cow position: | chr25:35296269-35296143 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 235-355 |
| Cow position: | chr25:13796735-13796854 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 82 |
Show alignments to all cow chromosomes.