Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-b11 |
| Conread position: | 15-328 |
| Cow position: | chr26:17663400-17663734 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 22-328 |
| Cow position: | chr26:12068876-12069194 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 26-309 |
| Cow position: | chr26:9558312-9558015 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-310 |
| Cow position: | chr26:8885400-8885697 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 249 |
| Conread position: | 26-328 |
| Cow position: | chr26:3187308-3187624 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-329 |
| Cow position: | chr26:8873403-8873719 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 18, 244 |
| Conread position: | 26-329 |
| Cow position: | chr26:19796697-19797013 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 26-331 |
| Cow position: | chr26:3690066-3690366 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 26-331 |
| Cow position: | chr26:14395921-14395601 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 26-354 |
| Cow position: | chr26:31794095-31794428 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 26-355 |
| Cow position: | chr26:2610512-2610174 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 288 |
| Conread position: | 26-355 |
| Cow position: | chr26:20182075-20182416 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 26-357 |
| Cow position: | chr26:6487536-6487193 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 245 |
| Conread position: | 26-357 |
| Cow position: | chr26:12126018-12125664 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 26-366 |
| Cow position: | chr26:9825572-9825222 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 29-322 |
| Cow position: | chr26:8308192-8307888 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 29-355 |
| Cow position: | chr26:32829568-32829911 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 30-356 |
| Cow position: | chr26:17288376-17288706 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 30-360 |
| Cow position: | chr26:32866592-32866256 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 256 |
| Conread position: | 34-304 |
| Cow position: | chr26:8875913-8875639 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 38-353 |
| Cow position: | chr26:6476103-6475778 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 211 |
| Conread position: | 43-357 |
| Cow position: | chr26:21351048-21351355 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 138 |
| Conread position: | 47-328 |
| Cow position: | chr26:19326548-19326832 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 61-309 |
| Cow position: | chr26:26670798-26670540 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 220 |
| Conread position: | 71-313 |
| Cow position: | chr26:17676720-17676468 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 229 |
| Conread position: | 74-329 |
| Cow position: | chr26:8034222-8034489 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 78-328 |
| Cow position: | chr26:11904048-11904310 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 79-343 |
| Cow position: | chr26:25403421-25403686 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 85-328 |
| Cow position: | chr26:29006383-29006624 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 85-361 |
| Cow position: | chr26:3922364-3922089 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 86-357 |
| Cow position: | chr26:8652212-8651931 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 128-330 |
| Cow position: | chr26:31462301-31462513 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 128-336 |
| Cow position: | chr26:12889735-12889938 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 128-351 |
| Cow position: | chr26:30802876-30803098 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 138-330 |
| Cow position: | chr26:20746862-20747065 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 139-310 |
| Cow position: | chr26:3833136-3832956 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 140 |
| Conread position: | 139-357 |
| Cow position: | chr26:15513207-15512982 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 73, 192 |
| Conread position: | 152-318 |
| Cow position: | chr26:8802631-8802806 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 174-331 |
| Cow position: | chr26:13773971-13774137 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 183-354 |
| Cow position: | chr26:19769610-19769432 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 194-357 |
| Cow position: | chr26:20130587-20130424 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 211-355 |
| Cow position: | chr26:4293518-4293375 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 226-354 |
| Cow position: | chr26:8280522-8280395 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 228-357 |
| Cow position: | chr26:18691954-18692081 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 231-355 |
| Cow position: | chr26:14359597-14359473 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 86 |
Show alignments to all cow chromosomes.