Cow genome map

Conread name: Ovi2-UMC-peov1-002-b11

Conread position: 10-355
Cow position: chr27:3729636-3729991 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 52

Conread position: 15-328
Cow position: chr27:21986564-21986228 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 72

Conread position: 22-339
Cow position: chr27:15363782-15364110 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 54

Conread position: 26-308
Cow position: chr27:10383943-10384240 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 8, 248

Conread position: 26-309
Cow position: chr27:1293760-1294057 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 26-309
Cow position: chr27:5836334-5836639 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 18, 230

Conread position: 26-309
Cow position: chr27:28984278-28984580 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 26-310
Cow position: chr27:13409508-13409806 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 135

Conread position: 26-329
Cow position: chr27:16823451-16823149 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 48

Conread position: 26-335
Cow position: chr27:10306619-10306941 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 113

Conread position: 26-337
Cow position: chr27:27683376-27683696 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 172

Conread position: 26-339
Cow position: chr27:12173449-12173773 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 102

Conread position: 26-343
Cow position: chr27:23658082-23658406 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 26-353
Cow position: chr27:11630396-11630060 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 75

Conread position: 26-355
Cow position: chr27:5423728-5424063 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 303

Conread position: 26-355
Cow position: chr27:18740897-18741236 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 18, 69

Conread position: 26-355
Cow position: chr27:21247062-21246728 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 142

Conread position: 26-356
Cow position: chr27:19963129-19962797 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 190, 19

Conread position: 26-356
Cow position: chr27:20828045-20828385 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 90

Conread position: 26-357
Cow position: chr27:1636294-1636633 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 88

Conread position: 26-357
Cow position: chr27:2936337-2936691 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 142

Conread position: 26-357
Cow position: chr27:8569086-8569417 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 73

Conread position: 26-357
Cow position: chr27:9090155-9090480 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 93

Conread position: 26-357
Cow position: chr27:19388677-19388338 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 27-357
Cow position: chr27:22330005-22330339 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 160

Conread position: 27-370
Cow position: chr27:25676910-25676573 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 31

Conread position: 28-328
Cow position: chr27:27063801-27064103 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 73

Conread position: 30-328
Cow position: chr27:26785332-26785641 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 121

Conread position: 30-355
Cow position: chr27:8429770-8430104 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 43

Conread position: 36-331
Cow position: chr27:22559720-22559416 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 78

Conread position: 38-309
Cow position: chr27:19423862-19423565 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 38-328
Cow position: chr27:22400419-22400120 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 91, 45

Conread position: 40-351
Cow position: chr27:27234621-27234313 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 143

Conread position: 40-351
Cow position: chr27:30677559-30677238 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 157

Conread position: 44-355
Cow position: chr27:9372142-9371823 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 293

Conread position: 47-357
Cow position: chr27:27867046-27867363 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 64

Conread position: 52-329
Cow position: chr27:17396823-17397113 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 15, 65

Conread position: 56-330
Cow position: chr27:6620821-6620537 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 162

Conread position: 86-328
Cow position: chr27:16263904-16263656 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 70

Conread position: 87-332
Cow position: chr27:13844005-13843750 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 202

Conread position: 95-357
Cow position: chr27:16494297-16494034 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 69

Conread position: 104-351
Cow position: chr27:25985153-25985410 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 230

Conread position: 121-357
Cow position: chr27:13976837-13977077 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 94, 7

Conread position: 128-329
Cow position: chr27:27930881-27931093 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 134-328
Cow position: chr27:4983065-4983260 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 46

Conread position: 143-328
Cow position: chr27:13638430-13638624 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 158

Conread position: 143-357
Cow position: chr27:795356-795131 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 131

Conread position: 147-307
Cow position: chr27:14881410-14881237 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 188-353
Cow position: chr27:30365685-30365519 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 27

Conread position: 188-357
Cow position: chr27:21578075-21578251 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 143

Conread position: 226-352
Cow position: chr27:27737483-27737609 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 98

Conread position: 226-357
Cow position: chr27:24342689-24342559 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 106

Conread position: 226-366
Cow position: chr27:20264048-20264185 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 92

Conread position: 227-355
Cow position: chr27:22394627-22394500 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 228-331
Cow position: chr27:15319892-15319788 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 228-366
Cow position: chr27:28106689-28106824 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 50

Show alignments to all cow chromosomes.