Cow genome map
| Conread name: | Ovi2-UMC-peov1-002-b11 |
| Conread position: | 1-314 |
| Cow position: | chr3:27090781-27090461 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 2-329 |
| Cow position: | chr3:471185-470851 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 45 |
| Conread position: | 3-329 |
| Cow position: | chr3:22083871-22083536 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 15-317 |
| Cow position: | chr3:58255731-58256042 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 16-328 |
| Cow position: | chr3:45700095-45700426 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 272 |
| Conread position: | 16-344 |
| Cow position: | chr3:9639594-9639254 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 16-355 |
| Cow position: | chr3:31749101-31749441 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 20-339 |
| Cow position: | chr3:73687136-73686808 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 24-329 |
| Cow position: | chr3:55190433-55190129 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 26-309 |
| Cow position: | chr3:44365460-44365753 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 26-309 |
| Cow position: | chr3:73450870-73450573 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 258 |
| Conread position: | 26-310 |
| Cow position: | chr3:21593726-21594022 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 26-310 |
| Cow position: | chr3:39921503-39921207 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 18, 138 |
| Conread position: | 26-321 |
| Cow position: | chr3:2851802-2851492 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 26-328 |
| Cow position: | chr3:17709614-17709932 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-328 |
| Cow position: | chr3:47272435-47272119 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-328 |
| Cow position: | chr3:54608569-54608252 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 244 |
| Conread position: | 26-328 |
| Cow position: | chr3:77187725-77188041 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 18, 158 |
| Conread position: | 26-329 |
| Cow position: | chr3:6264785-6265098 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 26-329 |
| Cow position: | chr3:8923042-8923356 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 26-329 |
| Cow position: | chr3:23735828-23735510 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 26-329 |
| Cow position: | chr3:73459499-73459816 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-331 |
| Cow position: | chr3:26833339-26833031 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 26-331 |
| Cow position: | chr3:31418971-31419290 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 26-331 |
| Cow position: | chr3:60932709-60933026 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 26-332 |
| Cow position: | chr3:45184557-45184245 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 26-336 |
| Cow position: | chr3:61677976-61678287 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 209 |
| Conread position: | 26-339 |
| Cow position: | chr3:10038868-10039176 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 26-344 |
| Cow position: | chr3:26750655-26750326 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 241 |
| Conread position: | 26-345 |
| Cow position: | chr3:14633790-14633473 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 26-349 |
| Cow position: | chr3:1483466-1483798 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 307 |
| Conread position: | 26-353 |
| Cow position: | chr3:27867096-27867433 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 267 |
| Conread position: | 26-354 |
| Cow position: | chr3:51490742-51491073 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 101, 124 |
| Conread position: | 26-355 |
| Cow position: | chr3:16114849-16115184 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 26-355 |
| Cow position: | chr3:19109006-19109349 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 138 |
| Conread position: | 26-355 |
| Cow position: | chr3:42603100-42603438 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 26-355 |
| Cow position: | chr3:51597362-51597696 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 35 |
| Conread position: | 26-355 |
| Cow position: | chr3:73936758-73936417 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 310 |
| Conread position: | 26-356 |
| Cow position: | chr3:16716394-16716063 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 26-356 |
| Cow position: | chr3:33633600-33633259 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 26-357 |
| Cow position: | chr3:5420597-5420251 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 26-357 |
| Cow position: | chr3:23944402-23944733 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 142 |
| Conread position: | 26-357 |
| Cow position: | chr3:35578240-35578568 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 26-357 |
| Cow position: | chr3:64318181-64318515 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 26-359 |
| Cow position: | chr3:55461222-55460881 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 26-359 |
| Cow position: | chr3:66978107-66978457 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 26-365 |
| Cow position: | chr3:73956271-73956620 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 230 |
| Conread position: | 26-376 |
| Cow position: | chr3:75164599-75164261 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 26-380 |
| Cow position: | chr3:59333005-59333363 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 266 |
| Conread position: | 26-380 |
| Cow position: | chr3:79094777-79094434 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 26-387 |
| Cow position: | chr3:26920162-26920538 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 27-329 |
| Cow position: | chr3:58950903-58951213 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 27-330 |
| Cow position: | chr3:9290047-9290346 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 27-359 |
| Cow position: | chr3:56101695-56102026 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 28-331 |
| Cow position: | chr3:6689275-6689589 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 28-331 |
| Cow position: | chr3:49463122-49462808 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 28-355 |
| Cow position: | chr3:67044822-67044483 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 310 |
| Conread position: | 29-329 |
| Cow position: | chr3:70894021-70894329 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 258 |
| Conread position: | 29-357 |
| Cow position: | chr3:49429205-49428867 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 242 |
| Conread position: | 29-366 |
| Cow position: | chr3:74700369-74700024 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 30-329 |
| Cow position: | chr3:72390366-72390675 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 30-329 |
| Cow position: | chr3:82702908-82703203 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 30-349 |
| Cow position: | chr3:82932079-82932399 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 30-355 |
| Cow position: | chr3:78546818-78546486 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 30-357 |
| Cow position: | chr3:27454113-27453775 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 30-357 |
| Cow position: | chr3:37628330-37628669 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 315 |
| Conread position: | 31-351 |
| Cow position: | chr3:6799721-6799397 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 31-355 |
| Cow position: | chr3:35077379-35077046 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 32-306 |
| Cow position: | chr3:20452760-20453049 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 33-352 |
| Cow position: | chr3:62611208-62611525 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 194 |
| Conread position: | 37-328 |
| Cow position: | chr3:58766580-58766888 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 37-328 |
| Cow position: | chr3:74391452-74391149 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 157 |
| Conread position: | 37-357 |
| Cow position: | chr3:18352904-18352576 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 296 |
| Conread position: | 38-329 |
| Cow position: | chr3:11542810-11543107 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 118 |
| Conread position: | 38-335 |
| Cow position: | chr3:59648551-59648862 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 38-352 |
| Cow position: | chr3:36128523-36128844 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 94, 302 |
| Conread position: | 38-355 |
| Cow position: | chr3:26474443-26474767 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 91, 23 |
| Conread position: | 38-357 |
| Cow position: | chr3:40344680-40345012 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 38-357 |
| Cow position: | chr3:52652888-52652554 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 91, 236 |
| Conread position: | 40-310 |
| Cow position: | chr3:46856925-46856639 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 90, 231 |
| Conread position: | 40-357 |
| Cow position: | chr3:56705293-56704962 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 307 |
| Conread position: | 41-357 |
| Cow position: | chr3:22272238-22271909 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 88, 307 |
| Conread position: | 42-357 |
| Cow position: | chr3:67165223-67165554 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 42-357 |
| Cow position: | chr3:76187985-76188309 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 160 |
| Conread position: | 43-357 |
| Cow position: | chr3:49132948-49132637 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 172, 49 |
| Conread position: | 44-320 |
| Cow position: | chr3:74407667-74407936 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 166, 70 |
| Conread position: | 46-335 |
| Cow position: | chr3:68302605-68302910 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 47-353 |
| Cow position: | chr3:27784427-27784742 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 286 |
| Conread position: | 48-326 |
| Cow position: | chr3:12712914-12712624 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 54-310 |
| Cow position: | chr3:19827985-19827721 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 232 |
| Conread position: | 54-357 |
| Cow position: | chr3:20390108-20389797 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 288 |
| Conread position: | 54-357 |
| Cow position: | chr3:69962407-69962098 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 277 |
| Conread position: | 55-332 |
| Cow position: | chr3:3714480-3714198 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 14, 221 |
| Conread position: | 60-328 |
| Cow position: | chr3:56976674-56976395 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 64-357 |
| Cow position: | chr3:38497257-38497556 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 67-329 |
| Cow position: | chr3:2035620-2035891 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 67-353 |
| Cow position: | chr3:42913738-42914032 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 75-357 |
| Cow position: | chr3:65236343-65236631 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 11, 203 |
| Conread position: | 76-357 |
| Cow position: | chr3:43424633-43424917 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 138, 45 |
| Conread position: | 77-328 |
| Cow position: | chr3:11333975-11333719 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 77-328 |
| Cow position: | chr3:11447340-11447596 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 83-331 |
| Cow position: | chr3:7857685-7857947 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 85-355 |
| Cow position: | chr3:31288060-31287787 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 86-329 |
| Cow position: | chr3:61172149-61171896 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 227 |
| Conread position: | 98-357 |
| Cow position: | chr3:17899168-17899436 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 31, 262 |
| Conread position: | 101-309 |
| Cow position: | chr3:34027049-34026826 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 101-329 |
| Cow position: | chr3:15685547-15685314 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 106-329 |
| Cow position: | chr3:11026155-11026386 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 114-357 |
| Cow position: | chr3:68342888-68342643 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 170 |
| Conread position: | 119-329 |
| Cow position: | chr3:2334660-2334877 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 119-332 |
| Cow position: | chr3:36671055-36670829 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 119-339 |
| Cow position: | chr3:82473411-82473641 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 120-331 |
| Cow position: | chr3:15954704-15954482 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 128-353 |
| Cow position: | chr3:32869494-32869729 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 128-355 |
| Cow position: | chr3:18219185-18218949 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 131 |
| Conread position: | 130-356 |
| Cow position: | chr3:2226420-2226654 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 130-357 |
| Cow position: | chr3:15079694-15079455 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 137-357 |
| Cow position: | chr3:14626762-14626538 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 138-331 |
| Cow position: | chr3:18886969-18887173 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 139-326 |
| Cow position: | chr3:56996-56800 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 139-355 |
| Cow position: | chr3:18459304-18459083 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 138 |
| Conread position: | 140-329 |
| Cow position: | chr3:61191520-61191324 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 143-351 |
| Cow position: | chr3:32772618-32772836 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 191 |
| Conread position: | 149-357 |
| Cow position: | chr3:22353535-22353756 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 151-315 |
| Cow position: | chr3:54573361-54573193 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 156-332 |
| Cow position: | chr3:18606490-18606674 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 156-357 |
| Cow position: | chr3:9842983-9843190 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 156-357 |
| Cow position: | chr3:33693029-33693237 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 157-330 |
| Cow position: | chr3:31504613-31504432 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 162-380 |
| Cow position: | chr3:82075683-82075456 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 46, 211 |
| Conread position: | 165-355 |
| Cow position: | chr3:36928199-36928007 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 166-355 |
| Cow position: | chr3:55444740-55444938 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 176 |
| Conread position: | 188-357 |
| Cow position: | chr3:39172070-39171892 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 156 |
| Conread position: | 190-357 |
| Cow position: | chr3:64537106-64536930 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 203-355 |
| Cow position: | chr3:12676070-12675911 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 139 |
| Conread position: | 224-350 |
| Cow position: | chr3:8752943-8753070 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 226-355 |
| Cow position: | chr3:82617872-82618001 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 226-357 |
| Cow position: | chr3:26554240-26554102 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 230-357 |
| Cow position: | chr3:62883465-62883589 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 236-355 |
| Cow position: | chr3:53538012-53538128 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 244-357 |
| Cow position: | chr3:79375473-79375585 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 26 |
Show alignments to all cow chromosomes.