Cow genome map


           Conread name:
           Ovi2-UMC-peov1-010-e08
        

               Conread position:
               1-297
               

               Cow position:
               chr18:43485965-43485668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               3-119
               

               Cow position:
               chr18:42986094-42986210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               3-317
               

               Cow position:
               chr18:12027953-12028245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               3-318
               

               Cow position:
               chr18:465104-465426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               6-317
               

               Cow position:
               chr18:7115192-7115501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               7-134
               

               Cow position:
               chr18:17015136-17015262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               19-223
               

               Cow position:
               chr18:43133787-43133996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               49-287
               

               Cow position:
               chr18:44219580-44219343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 40
               

               Conread position:
               97-239
               

               Cow position:
               chr18:38892557-38892706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               121-234
               

               Cow position:
               chr18:50054066-50053950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 40
               
Show alignments to all cow chromosomes.