Cow genome map


           Conread name:
           Ovi2-UMC-peov1-010-e08
        

               Conread position:
               3-177
               

               Cow position:
               chr20:35723157-35722980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 96
               

               Conread position:
               6-240
               

               Cow position:
               chr20:6255592-6255356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               8-319
               

               Cow position:
               chr20:24329057-24329358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 143
               

               Conread position:
               19-223
               

               Cow position:
               chr20:20142697-20142906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               67-191
               

               Cow position:
               chr20:37396528-37396653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               140-315
               

               Cow position:
               chr20:3315010-3314830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 96
               

               Conread position:
               140-319
               

               Cow position:
               chr20:11606998-11606817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               141-306
               

               Cow position:
               chr20:16681608-16681437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 96
               
Show alignments to all cow chromosomes.