Cow genome map


           Conread name:
           Ovi2-UMC-peov1-010-e08
        

               Conread position:
               1-141
               

               Cow position:
               chr25:36035273-36035131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 108
               

               Conread position:
               3-141
               

               Cow position:
               chr25:11260270-11260131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 108
               

               Conread position:
               3-319
               

               Cow position:
               chr25:6260802-6261118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               12-258
               

               Cow position:
               chr25:24578340-24578106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               8, 118
               

               Conread position:
               19-223
               

               Cow position:
               chr25:14530958-14531165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               74-235
               

               Cow position:
               chr25:33748116-33747949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               90-190
               

               Cow position:
               chr25:25754855-25754755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-319
               

               Cow position:
               chr25:22569493-22569263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               135-317
               

               Cow position:
               chr25:3413146-3412953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 104
               

               Conread position:
               164-307
               

               Cow position:
               chr25:30069414-30069561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 74
               
Show alignments to all cow chromosomes.