Cow genome map


           Conread name:
           Ovi2-UMC-peov1-010-e08
        

               Conread position:
               1-181
               

               Cow position:
               chr9:25794442-25794260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 119
               

               Conread position:
               3-191
               

               Cow position:
               chr9:50822543-50822729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               3-241
               

               Cow position:
               chr9:56294154-56293913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               3-258
               

               Cow position:
               chr9:45406785-45406517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               3-271
               

               Cow position:
               chr9:61851666-61851930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               3-319
               

               Cow position:
               chr9:5147466-5147798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 245
               

               Conread position:
               25-191
               

               Cow position:
               chr9:23518839-23519012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               81-319
               

               Cow position:
               chr9:64594627-64594868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               140-319
               

               Cow position:
               chr9:29663311-29663128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 85
               
Show alignments to all cow chromosomes.