Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-390 |
| Cow position: | chr12:487925-487511 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 3-431 |
| Cow position: | chr12:42193471-42193029 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 22-280 |
| Cow position: | chr12:30686983-30686712 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 29-379 |
| Cow position: | chr12:37562237-37561856 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 33-269 |
| Cow position: | chr12:36287781-36288030 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-271 |
| Cow position: | chr12:19871444-19871196 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 33-288 |
| Cow position: | chr12:20459488-20459755 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 33-294 |
| Cow position: | chr12:8674834-8675107 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-384 |
| Cow position: | chr12:25148387-25148775 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 33-384 |
| Cow position: | chr12:35547897-35548284 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 160 |
| Conread position: | 33-389 |
| Cow position: | chr12:19155628-19156011 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 78, 157 |
| Conread position: | 33-410 |
| Cow position: | chr12:3717042-3717453 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 33-410 |
| Cow position: | chr12:12754925-12755338 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 153 |
| Conread position: | 33-410 |
| Cow position: | chr12:27929560-27929975 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 84, 164 |
| Conread position: | 33-413 |
| Cow position: | chr12:27506418-27506835 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-427 |
| Cow position: | chr12:18585904-18585477 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 164 |
| Conread position: | 37-288 |
| Cow position: | chr12:9988459-9988724 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-410 |
| Cow position: | chr12:27994328-27993917 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 42-281 |
| Cow position: | chr12:23491512-23491761 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 74, 103 |
| Conread position: | 42-289 |
| Cow position: | chr12:542195-542454 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 186 |
| Conread position: | 45-369 |
| Cow position: | chr12:21314211-21314572 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 45-410 |
| Cow position: | chr12:42232528-42232126 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 45-410 |
| Cow position: | chr12:42856312-42856712 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 46-280 |
| Cow position: | chr12:6106130-6106376 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 142 |
| Conread position: | 46-288 |
| Cow position: | chr12:250100-250349 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 46-288 |
| Cow position: | chr12:41338014-41338266 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 151 |
| Conread position: | 46-384 |
| Cow position: | chr12:22748433-22748057 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-430 |
| Cow position: | chr12:23099831-23100243 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 47-280 |
| Cow position: | chr12:10931302-10931057 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 70, 113 |
| Conread position: | 47-288 |
| Cow position: | chr12:1405667-1405412 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 144 |
| Conread position: | 47-410 |
| Cow position: | chr12:11101465-11101065 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 113 |
| Conread position: | 48-385 |
| Cow position: | chr12:10164744-10165096 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 199 |
| Conread position: | 60-289 |
| Cow position: | chr12:32066764-32066527 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 132-427 |
| Cow position: | chr12:12295651-12295336 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 135-410 |
| Cow position: | chr12:22479879-22480179 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 49 |
Show alignments to all cow chromosomes.