Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-284 |
| Cow position: | chr14:14076025-14075741 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 1-289 |
| Cow position: | chr14:20706604-20706318 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 1-294 |
| Cow position: | chr14:12944877-12945167 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 116, 23 |
| Conread position: | 1-431 |
| Cow position: | chr14:39321759-39321298 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 2-416 |
| Cow position: | chr14:18107464-18107042 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 33 |
| Conread position: | 5-402 |
| Cow position: | chr14:21689152-21688748 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 43 |
| Conread position: | 25-274 |
| Cow position: | chr14:43564334-43564074 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 25-371 |
| Cow position: | chr14:29726785-29726418 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 26-402 |
| Cow position: | chr14:43561098-43560694 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 33-288 |
| Cow position: | chr14:1727039-1726772 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 163 |
| Conread position: | 33-288 |
| Cow position: | chr14:7475750-7475482 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 157 |
| Conread position: | 33-288 |
| Cow position: | chr14:8998507-8998240 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 33-288 |
| Cow position: | chr14:10310452-10310180 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-288 |
| Cow position: | chr14:12903227-12902959 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-288 |
| Cow position: | chr14:16997145-16997414 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 33-288 |
| Cow position: | chr14:31881995-31882263 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-296 |
| Cow position: | chr14:50114261-50113984 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 154 |
| Conread position: | 33-406 |
| Cow position: | chr14:12740156-12740567 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-406 |
| Cow position: | chr14:16916834-16917244 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-409 |
| Cow position: | chr14:22026881-22027293 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 155 |
| Conread position: | 33-410 |
| Cow position: | chr14:11151023-11151436 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr14:15272369-15272783 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-410 |
| Cow position: | chr14:19325366-19325781 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr14:34906418-34906004 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 33-410 |
| Cow position: | chr14:37227066-37226651 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 157 |
| Conread position: | 33-410 |
| Cow position: | chr14:50069305-50069713 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 33-411 |
| Cow position: | chr14:17690021-17689606 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-411 |
| Cow position: | chr14:35497413-35497025 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 33-426 |
| Cow position: | chr14:5532233-5531803 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-429 |
| Cow position: | chr14:32449849-32449430 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 124, 144 |
| Conread position: | 33-430 |
| Cow position: | chr14:36344407-36344816 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 247, 96 |
| Conread position: | 34-410 |
| Cow position: | chr14:44293513-44293113 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 143 |
| Conread position: | 37-288 |
| Cow position: | chr14:48251559-48251824 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-303 |
| Cow position: | chr14:24922672-24922392 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 159 |
| Conread position: | 37-389 |
| Cow position: | chr14:35603971-35603594 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 147 |
| Conread position: | 37-389 |
| Cow position: | chr14:44076796-44077184 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 154 |
| Conread position: | 37-410 |
| Cow position: | chr14:30476452-30476855 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-410 |
| Cow position: | chr14:46302793-46302384 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 78, 152 |
| Conread position: | 37-425 |
| Cow position: | chr14:40345406-40345005 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 156 |
| Conread position: | 45-288 |
| Cow position: | chr14:13769411-13769666 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 46-278 |
| Cow position: | chr14:41755929-41755685 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 46-287 |
| Cow position: | chr14:13308612-13308358 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 144 |
| Conread position: | 46-289 |
| Cow position: | chr14:36710181-36710438 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 144 |
| Conread position: | 46-382 |
| Cow position: | chr14:46636656-46637026 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 46-384 |
| Cow position: | chr14:23229898-23230250 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 46-396 |
| Cow position: | chr14:34674980-34674593 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 46-410 |
| Cow position: | chr14:32584145-32584547 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-410 |
| Cow position: | chr14:44692043-44691651 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 46-421 |
| Cow position: | chr14:12962871-12963275 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 46-424 |
| Cow position: | chr14:40475834-40476232 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 71, 138 |
| Conread position: | 47-280 |
| Cow position: | chr14:9848676-9848918 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 47-288 |
| Cow position: | chr14:27040504-27040758 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 60-402 |
| Cow position: | chr14:46548998-46548628 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 61-274 |
| Cow position: | chr14:40984522-40984744 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 125 |
| Conread position: | 74-288 |
| Cow position: | chr14:11474438-11474665 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 77-402 |
| Cow position: | chr14:1661295-1660942 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 148-382 |
| Cow position: | chr14:21920471-21920716 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 34 |
Show alignments to all cow chromosomes.