Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-289 |
| Cow position: | chr15:16340761-16341037 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-294 |
| Cow position: | chr15:46231415-46231124 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 1-424 |
| Cow position: | chr15:39446377-39446830 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 23 |
| Conread position: | 1-426 |
| Cow position: | chr15:9438521-9438076 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 306 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 3-250 |
| Cow position: | chr15:11664604-11664360 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-289 |
| Cow position: | chr15:4103841-4104133 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 3-411 |
| Cow position: | chr15:12721330-12720904 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 31-416 |
| Cow position: | chr15:24048163-24047772 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 33-274 |
| Cow position: | chr15:20458221-20457970 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 33-279 |
| Cow position: | chr15:50344833-50345092 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-280 |
| Cow position: | chr15:25554039-25553780 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 33-280 |
| Cow position: | chr15:36671072-36670812 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 33-288 |
| Cow position: | chr15:312904-313171 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 156 |
| Conread position: | 33-288 |
| Cow position: | chr15:5197247-5196984 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-288 |
| Cow position: | chr15:6550717-6550985 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-288 |
| Cow position: | chr15:20413471-20413204 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 33-288 |
| Cow position: | chr15:22760107-22760360 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 84, 110 |
| Conread position: | 33-288 |
| Cow position: | chr15:25132854-25132586 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr15:27747623-27747891 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr15:35643554-35643822 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr15:37394624-37394359 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 155 |
| Conread position: | 33-289 |
| Cow position: | chr15:36356172-36356436 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 151 |
| Conread position: | 33-322 |
| Cow position: | chr15:11575114-11575426 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 157 |
| Conread position: | 33-333 |
| Cow position: | chr15:4730380-4730062 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 155 |
| Conread position: | 33-382 |
| Cow position: | chr15:1785663-1785279 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-399 |
| Cow position: | chr15:22539942-22540323 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 249, 33 |
| Conread position: | 33-410 |
| Cow position: | chr15:7547764-7547357 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 33-410 |
| Cow position: | chr15:17034730-17035146 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 33-410 |
| Cow position: | chr15:19734902-19735317 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr15:32490993-32491406 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 33-410 |
| Cow position: | chr15:35750399-35750813 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 33-410 |
| Cow position: | chr15:42532947-42532532 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-410 |
| Cow position: | chr15:42939808-42939398 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 84, 152 |
| Conread position: | 33-410 |
| Cow position: | chr15:51220639-51220223 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-429 |
| Cow position: | chr15:21825762-21825330 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-430 |
| Cow position: | chr15:4728061-4727676 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 34-405 |
| Cow position: | chr15:51910640-51911044 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 150 |
| Conread position: | 34-425 |
| Cow position: | chr15:7058622-7058193 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 35-275 |
| Cow position: | chr15:10569572-10569333 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 100, 117 |
| Conread position: | 37-288 |
| Cow position: | chr15:17267407-17267143 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-410 |
| Cow position: | chr15:7319459-7319050 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-410 |
| Cow position: | chr15:21662849-21663260 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-429 |
| Cow position: | chr15:4388640-4388213 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 37-429 |
| Cow position: | chr15:12417817-12418245 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 79, 151 |
| Conread position: | 38-386 |
| Cow position: | chr15:24043669-24043288 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 43-411 |
| Cow position: | chr15:30612065-30611677 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 62, 96 |
| Conread position: | 45-382 |
| Cow position: | chr15:8102335-8101968 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 46-275 |
| Cow position: | chr15:16925818-16926053 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 46-280 |
| Cow position: | chr15:8629192-8628947 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 142 |
| Conread position: | 46-288 |
| Cow position: | chr15:2015357-2015122 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 46-289 |
| Cow position: | chr15:20329530-20329771 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 150 |
| Conread position: | 46-304 |
| Cow position: | chr15:15896481-15896747 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 46-328 |
| Cow position: | chr15:9735840-9736141 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 257 |
| Conread position: | 46-382 |
| Cow position: | chr15:23173185-23173555 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 149 |
| Conread position: | 46-410 |
| Cow position: | chr15:7841203-7840816 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 111, 50 |
| Conread position: | 46-416 |
| Cow position: | chr15:46431270-46430887 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 134 |
| Conread position: | 47-226 |
| Cow position: | chr15:32876903-32876723 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 137 |
| Conread position: | 47-289 |
| Cow position: | chr15:44297980-44298228 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 139 |
| Conread position: | 47-410 |
| Cow position: | chr15:5497941-5497543 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 7 |
| Conread position: | 59-266 |
| Cow position: | chr15:7671080-7671286 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 60-381 |
| Cow position: | chr15:7508318-7508661 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 61-289 |
| Cow position: | chr15:22143381-22143612 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 61-411 |
| Cow position: | chr15:28965252-28965610 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 120-411 |
| Cow position: | chr15:30638882-30639184 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 236-412 |
| Cow position: | chr15:29331285-29331470 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 117 |
Show alignments to all cow chromosomes.