Cow genome map

Conread name: Ovi2-UMC-peov1-011-h11

Conread position: 1-271
Cow position: chr2:64525311-64525037 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 34

Conread position: 3-416
Cow position: chr2:43107139-43106692 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 27

Conread position: 4-231
Cow position: chr2:47256688-47256450 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 184

Conread position: 7-276
Cow position: chr2:78518698-78518436 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 23

Conread position: 7-379
Cow position: chr2:33327345-33327715 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 239
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 260, 46

Conread position: 7-424
Cow position: chr2:45493642-45494058 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 27

Conread position: 22-430
Cow position: chr2:15751084-15750647 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 107, 13

Conread position: 24-415
Cow position: chr2:1200035-1200457 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 11

Conread position: 26-289
Cow position: chr2:11501727-11501457 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 16

Conread position: 27-265
Cow position: chr2:21474994-21475231 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 23

Conread position: 31-288
Cow position: chr2:66901538-66901808 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 166

Conread position: 33-280
Cow position: chr2:4224858-4224602 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 66

Conread position: 33-287
Cow position: chr2:6965708-6965442 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 156

Conread position: 33-288
Cow position: chr2:279462-279730 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 84, 153

Conread position: 33-288
Cow position: chr2:4417279-4417540 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 78, 21

Conread position: 33-288
Cow position: chr2:5867526-5867798 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 73, 189

Conread position: 33-288
Cow position: chr2:14208063-14208325 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 81, 151

Conread position: 33-288
Cow position: chr2:16718121-16718389 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 158

Conread position: 33-288
Cow position: chr2:20977821-20977554 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr2:25742489-25742754 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 156

Conread position: 33-288
Cow position: chr2:28796628-28796359 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 33-288
Cow position: chr2:33080995-33081253 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 22

Conread position: 33-288
Cow position: chr2:41764041-41763781 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 84, 149

Conread position: 33-288
Cow position: chr2:43209921-43209654 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 57

Conread position: 33-288
Cow position: chr2:51921783-51922050 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 156

Conread position: 33-289
Cow position: chr2:44229972-44230238 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 153

Conread position: 33-289
Cow position: chr2:53030873-53030607 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 157

Conread position: 33-323
Cow position: chr2:13006093-13005787 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 130

Conread position: 33-379
Cow position: chr2:6004054-6004437 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 156

Conread position: 33-382
Cow position: chr2:2181489-2181874 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 84, 156

Conread position: 33-382
Cow position: chr2:39424710-39424327 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 110

Conread position: 33-382
Cow position: chr2:47181968-47182352 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 84, 155

Conread position: 33-382
Cow position: chr2:63068099-63068483 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 124

Conread position: 33-389
Cow position: chr2:8121478-8121084 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 157

Conread position: 33-389
Cow position: chr2:45917990-45918381 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 84, 64

Conread position: 33-402
Cow position: chr2:62683447-62683040 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 272
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 156

Conread position: 33-406
Cow position: chr2:12285984-12285582 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 274
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 84, 21

Conread position: 33-410
Cow position: chr2:1187075-1187498 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 165

Conread position: 33-410
Cow position: chr2:10183446-10183861 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:10262626-10263040 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:10468379-10467964 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:15963893-15964308 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:19014137-19013725 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:24876411-24876817 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 155

Conread position: 33-410
Cow position: chr2:28646844-28647256 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:36983434-36983021 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:46182753-46183168 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 286
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 73, 157

Conread position: 33-410
Cow position: chr2:50080345-50079931 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 21

Conread position: 33-410
Cow position: chr2:50980373-50980787 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 22

Conread position: 33-410
Cow position: chr2:53003422-53003834 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr2:72931303-72931717 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 156

Conread position: 33-427
Cow position: chr2:12221510-12221931 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 402

Conread position: 33-429
Cow position: chr2:42667924-42668356 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 22

Conread position: 33-430
Cow position: chr2:3828709-3829126 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 280
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 154

Conread position: 34-288
Cow position: chr2:21981975-21982242 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 156

Conread position: 37-274
Cow position: chr2:15060191-15060438 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 151

Conread position: 37-278
Cow position: chr2:981778-981520 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 213

Conread position: 37-410
Cow position: chr2:2603444-2603044 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 80, 153

Conread position: 37-429
Cow position: chr2:7370445-7370021 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 113

Conread position: 40-410
Cow position: chr2:12595729-12595345 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 89

Conread position: 40-424
Cow position: chr2:3768693-3769109 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 130

Conread position: 45-288
Cow position: chr2:31410112-31410364 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 9

Conread position: 45-288
Cow position: chr2:32062958-32063214 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 145

Conread position: 45-382
Cow position: chr2:54740242-54739880 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 9

Conread position: 45-406
Cow position: chr2:29218734-29218358 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 9

Conread position: 45-430
Cow position: chr2:8778917-8778513 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 150

Conread position: 46-280
Cow position: chr2:14883006-14882759 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 144

Conread position: 46-283
Cow position: chr2:46351306-46351557 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 127

Conread position: 46-288
Cow position: chr2:9688532-9688787 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 144

Conread position: 46-288
Cow position: chr2:72790808-72791062 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 144

Conread position: 46-288
Cow position: chr2:77859093-77858844 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 74, 144

Conread position: 46-410
Cow position: chr2:70498862-70499259 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 142

Conread position: 46-411
Cow position: chr2:778682-779060 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 18

Conread position: 46-416
Cow position: chr2:29031631-29031224 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 150

Conread position: 46-424
Cow position: chr2:38082362-38082766 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 59, 33

Conread position: 46-425
Cow position: chr2:6750039-6750421 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 48

Conread position: 46-430
Cow position: chr2:817225-816820 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 273
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 97

Conread position: 47-414
Cow position: chr2:75408388-75408003 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 149

Conread position: 48-278
Cow position: chr2:56054516-56054274 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 141

Conread position: 48-429
Cow position: chr2:20917404-20917820 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 281
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 97

Conread position: 49-377
Cow position: chr2:23492559-23492200 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 141

Conread position: 49-416
Cow position: chr2:54655580-54655975 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 137

Conread position: 53-382
Cow position: chr2:53542701-53542335 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 137

Conread position: 55-424
Cow position: chr2:1196772-1197154 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 126

Conread position: 59-275
Cow position: chr2:432088-432317 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 58, 130

Conread position: 61-411
Cow position: chr2:3598625-3598244 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 257
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 99

Conread position: 74-294
Cow position: chr2:62289496-62289271 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 38

Conread position: 74-421
Cow position: chr2:84490108-84490466 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 41, 123

Conread position: 99-389
Cow position: chr2:54716141-54715832 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 84

Conread position: 117-411
Cow position: chr2:43778362-43778664 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 37

Conread position: 129-389
Cow position: chr2:36075163-36075425 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 12

Conread position: 150-411
Cow position: chr2:41579445-41579712 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 33

Show alignments to all cow chromosomes.