Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-281 |
| Cow position: | chr20:3308205-3307913 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 1-324 |
| Cow position: | chr20:1534210-1534546 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 2-429 |
| Cow position: | chr20:14930563-14930116 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 9-405 |
| Cow position: | chr20:5351738-5352149 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 19-288 |
| Cow position: | chr20:8445723-8445446 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 25-411 |
| Cow position: | chr20:2718827-2718430 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 33-280 |
| Cow position: | chr20:6550697-6550957 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-284 |
| Cow position: | chr20:14511996-14511733 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 193 |
| Conread position: | 33-287 |
| Cow position: | chr20:30384944-30385211 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 157 |
| Conread position: | 33-288 |
| Cow position: | chr20:14721077-14721342 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 84, 140 |
| Conread position: | 33-288 |
| Cow position: | chr20:15090071-15090342 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr20:16106749-16106481 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 33-288 |
| Cow position: | chr20:19018103-19018371 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 80, 157 |
| Conread position: | 33-288 |
| Cow position: | chr20:25845324-25845590 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 33-288 |
| Cow position: | chr20:32164803-32165066 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 33-288 |
| Cow position: | chr20:34968283-34968016 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 157 |
| Conread position: | 33-289 |
| Cow position: | chr20:13954925-13954664 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 33-289 |
| Cow position: | chr20:19425493-19425227 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 33-402 |
| Cow position: | chr20:12435098-12435501 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 155 |
| Conread position: | 33-402 |
| Cow position: | chr20:16515624-16515251 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 33-409 |
| Cow position: | chr20:27876787-27876369 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 33-410 |
| Cow position: | chr20:12568015-12568424 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr20:15295321-15294924 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr20:22208922-22208508 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 84, 154 |
| Conread position: | 33-410 |
| Cow position: | chr20:35127970-35127557 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 84, 163 |
| Conread position: | 33-411 |
| Cow position: | chr20:16944799-16944402 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 33-425 |
| Cow position: | chr20:13654033-13654452 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 170 |
| Conread position: | 33-429 |
| Cow position: | chr20:35159284-35159711 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 161 |
| Conread position: | 34-288 |
| Cow position: | chr20:21398119-21397852 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 156 |
| Conread position: | 37-288 |
| Cow position: | chr20:28725058-28724789 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 37-289 |
| Cow position: | chr20:10686028-10685771 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 130 |
| Conread position: | 37-410 |
| Cow position: | chr20:5538469-5538068 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 69, 139 |
| Conread position: | 37-410 |
| Cow position: | chr20:17657935-17658346 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 46-269 |
| Cow position: | chr20:14745900-14745665 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-288 |
| Cow position: | chr20:6476806-6476553 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 46-288 |
| Cow position: | chr20:28560597-28560851 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 46-288 |
| Cow position: | chr20:30431559-30431305 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 46-289 |
| Cow position: | chr20:13025042-13025296 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 71, 115 |
| Conread position: | 46-384 |
| Cow position: | chr20:25988040-25987681 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 83, 146 |
| Conread position: | 46-401 |
| Cow position: | chr20:826068-825676 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 47-405 |
| Cow position: | chr20:10921636-10922030 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 142 |
| Conread position: | 48-274 |
| Cow position: | chr20:8870991-8871207 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 67-288 |
| Cow position: | chr20:9339291-9339060 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 110-429 |
| Cow position: | chr20:28294523-28294182 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 117-411 |
| Cow position: | chr20:19669259-19669566 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 30 |
Show alignments to all cow chromosomes.