Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-412 |
| Cow position: | chr22:41034974-41034546 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 1-420 |
| Cow position: | chr22:13545458-13545889 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 116, 50 |
| Conread position: | 1-421 |
| Cow position: | chr22:6514050-6514490 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 1-424 |
| Cow position: | chr22:30067248-30067691 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 1-424 |
| Cow position: | chr22:36852571-36853024 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 1-424 |
| Cow position: | chr22:40719699-40720130 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 1-431 |
| Cow position: | chr22:13290121-13289676 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 2-421 |
| Cow position: | chr22:8900537-8900087 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 7-411 |
| Cow position: | chr22:13209642-13209211 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 110, 43 |
| Conread position: | 10-395 |
| Cow position: | chr22:41170149-41169736 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 19-280 |
| Cow position: | chr22:26089988-26090258 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 25-324 |
| Cow position: | chr22:27320894-27320581 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 16 |
| Conread position: | 30-429 |
| Cow position: | chr22:12225656-12226085 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 31-429 |
| Cow position: | chr22:11036727-11036308 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 86, 63 |
| Conread position: | 33-272 |
| Cow position: | chr22:15049208-15048972 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 74 |
| Conread position: | 33-280 |
| Cow position: | chr22:25340391-25340134 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr22:1517804-1518070 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-288 |
| Cow position: | chr22:19140467-19140734 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 82, 156 |
| Conread position: | 33-288 |
| Cow position: | chr22:44494480-44494230 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 33-288 |
| Cow position: | chr22:46568851-46569119 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-379 |
| Cow position: | chr22:9371596-9371215 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-382 |
| Cow position: | chr22:3275119-3275506 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-382 |
| Cow position: | chr22:29855087-29854707 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 33-384 |
| Cow position: | chr22:21192964-21193353 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 130 |
| Conread position: | 33-389 |
| Cow position: | chr22:12728423-12728815 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 163 |
| Conread position: | 33-405 |
| Cow position: | chr22:18603573-18603977 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-406 |
| Cow position: | chr22:9269436-9269028 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 147 |
| Conread position: | 33-409 |
| Cow position: | chr22:42994411-42993998 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-410 |
| Cow position: | chr22:3433725-3434140 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-410 |
| Cow position: | chr22:15308725-15309140 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-410 |
| Cow position: | chr22:17325264-17325658 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 151 |
| Conread position: | 33-410 |
| Cow position: | chr22:19600564-19600978 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 70, 162 |
| Conread position: | 33-410 |
| Cow position: | chr22:19822429-19822008 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 33-410 |
| Cow position: | chr22:25968422-25968824 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 33-410 |
| Cow position: | chr22:28785357-28784944 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr22:29397322-29396927 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-410 |
| Cow position: | chr22:39465303-39465718 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr22:42500128-42500540 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 33-411 |
| Cow position: | chr22:13185046-13184640 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 73, 154 |
| Conread position: | 33-411 |
| Cow position: | chr22:35162420-35162829 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 161 |
| Conread position: | 33-427 |
| Cow position: | chr22:12969166-12969587 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 33-429 |
| Cow position: | chr22:557465-557896 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 33-429 |
| Cow position: | chr22:6339891-6339465 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 33-429 |
| Cow position: | chr22:21592661-21592229 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 34-289 |
| Cow position: | chr22:44925089-44925358 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 82, 156 |
| Conread position: | 35-280 |
| Cow position: | chr22:1280415-1280661 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 37-282 |
| Cow position: | chr22:9728739-9728997 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 79, 153 |
| Conread position: | 37-288 |
| Cow position: | chr22:5315474-5315210 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 151 |
| Conread position: | 37-411 |
| Cow position: | chr22:28129987-28129575 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 80, 152 |
| Conread position: | 42-320 |
| Cow position: | chr22:11260502-11260792 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 42-385 |
| Cow position: | chr22:1483642-1483264 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 44-279 |
| Cow position: | chr22:27680079-27679829 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 146 |
| Conread position: | 45-389 |
| Cow position: | chr22:6498475-6498845 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 72, 143 |
| Conread position: | 46-282 |
| Cow position: | chr22:34171675-34171426 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 144 |
| Conread position: | 46-282 |
| Cow position: | chr22:46587220-46586972 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 46-288 |
| Cow position: | chr22:15920605-15920859 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 103 |
| Conread position: | 46-288 |
| Cow position: | chr22:41846340-41846601 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 46-301 |
| Cow position: | chr22:1310717-1310965 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 46-328 |
| Cow position: | chr22:36357282-36356981 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-360 |
| Cow position: | chr22:46577127-46577452 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 46-399 |
| Cow position: | chr22:15953775-15954161 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 46-402 |
| Cow position: | chr22:46611797-46612155 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 46-410 |
| Cow position: | chr22:18808007-18808406 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 141 |
| Conread position: | 46-410 |
| Cow position: | chr22:18811688-18812087 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 141 |
| Conread position: | 46-410 |
| Cow position: | chr22:33951727-33952127 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 142 |
| Conread position: | 46-424 |
| Cow position: | chr22:12095160-12095560 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 46-424 |
| Cow position: | chr22:35903987-35904370 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 47-278 |
| Cow position: | chr22:3011956-3011720 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 131 |
| Conread position: | 47-289 |
| Cow position: | chr22:12535091-12535338 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 47-424 |
| Cow position: | chr22:39133095-39132700 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 130 |
| Conread position: | 58-402 |
| Cow position: | chr22:18030457-18030087 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 59-401 |
| Cow position: | chr22:10721911-10722268 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 67-288 |
| Cow position: | chr22:28714066-28713832 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 75-377 |
| Cow position: | chr22:27299033-27299345 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 99-429 |
| Cow position: | chr22:22411581-22411228 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 110-411 |
| Cow position: | chr22:533241-532916 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 117-430 |
| Cow position: | chr22:40385013-40384698 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 65 |
Show alignments to all cow chromosomes.