Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-289 |
| Cow position: | chr24:6464306-6464019 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 1-289 |
| Cow position: | chr24:19902922-19903212 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 1-321 |
| Cow position: | chr24:16297847-16298155 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 1-416 |
| Cow position: | chr24:25059328-25059766 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 1-419 |
| Cow position: | chr24:23806347-23805928 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 4-424 |
| Cow position: | chr24:31185129-31184681 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 9-422 |
| Cow position: | chr24:19199298-19198854 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 19-382 |
| Cow position: | chr24:40551959-40551562 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 26-416 |
| Cow position: | chr24:29181684-29181280 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 33-279 |
| Cow position: | chr24:13191485-13191233 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 86, 151 |
| Conread position: | 33-280 |
| Cow position: | chr24:17105553-17105811 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr24:6079750-6079482 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 158 |
| Conread position: | 33-288 |
| Cow position: | chr24:12090304-12090035 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 33-288 |
| Cow position: | chr24:19688255-19688523 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 82, 157 |
| Conread position: | 33-288 |
| Cow position: | chr24:22975132-22974863 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 148 |
| Conread position: | 33-288 |
| Cow position: | chr24:33937253-33936985 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-289 |
| Cow position: | chr24:36726479-36726210 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 84, 24 |
| Conread position: | 33-389 |
| Cow position: | chr24:9071517-9071908 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 164 |
| Conread position: | 33-402 |
| Cow position: | chr24:25439525-25439144 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 93 |
| Conread position: | 33-402 |
| Cow position: | chr24:31302029-31301622 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr24:6412802-6412387 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr24:9549588-9549176 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 156 |
| Conread position: | 33-410 |
| Cow position: | chr24:35823881-35824292 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 137 |
| Conread position: | 33-411 |
| Cow position: | chr24:17545544-17545133 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 33-415 |
| Cow position: | chr24:20283888-20284303 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 33-429 |
| Cow position: | chr24:40467089-40467524 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-431 |
| Cow position: | chr24:37222499-37222903 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 34-382 |
| Cow position: | chr24:22794884-22794496 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 34-411 |
| Cow position: | chr24:41005802-41005387 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 156 |
| Conread position: | 37-280 |
| Cow position: | chr24:25285079-25284842 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 80, 125 |
| Conread position: | 37-280 |
| Cow position: | chr24:40120779-40121026 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 145 |
| Conread position: | 38-280 |
| Cow position: | chr24:12264469-12264724 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 153 |
| Conread position: | 42-421 |
| Cow position: | chr24:33008413-33008830 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 45-288 |
| Cow position: | chr24:14760204-14759950 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 46-190 |
| Cow position: | chr24:20121778-20121923 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 46-289 |
| Cow position: | chr24:7404749-7405005 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-289 |
| Cow position: | chr24:10879859-10879607 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 141 |
| Conread position: | 46-424 |
| Cow position: | chr24:17030683-17031091 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 48-416 |
| Cow position: | chr24:6238634-6238247 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 62, 135 |
| Conread position: | 53-282 |
| Cow position: | chr24:32084270-32084510 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 141 |
| Conread position: | 110-427 |
| Cow position: | chr24:12669699-12669356 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 123-430 |
| Cow position: | chr24:16056637-16056962 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 60 |
Show alignments to all cow chromosomes.