Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-278 |
| Cow position: | chr25:19107512-19107249 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 174, 29 |
| Conread position: | 1-280 |
| Cow position: | chr25:9647007-9646725 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 117, 24 |
| Conread position: | 1-289 |
| Cow position: | chr25:14618967-14619253 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 1-424 |
| Cow position: | chr25:30112467-30112899 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 4-263 |
| Cow position: | chr25:382815-383082 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 7-237 |
| Cow position: | chr25:13965953-13965718 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 22-288 |
| Cow position: | chr25:26931127-26930848 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 22-289 |
| Cow position: | chr25:3172368-3172647 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 33-288 |
| Cow position: | chr25:7223411-7223678 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 33-288 |
| Cow position: | chr25:13960088-13959824 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-288 |
| Cow position: | chr25:21949819-21949554 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 33-288 |
| Cow position: | chr25:25509894-25509626 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr25:32577641-32577908 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr25:34503201-34503469 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-289 |
| Cow position: | chr25:17657641-17657378 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 57 |
| Conread position: | 33-324 |
| Cow position: | chr25:41135724-41136029 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 33-388 |
| Cow position: | chr25:29525846-29526233 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 151 |
| Conread position: | 33-395 |
| Cow position: | chr25:10633985-10634380 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 82, 163 |
| Conread position: | 33-408 |
| Cow position: | chr25:24655148-24655558 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 73, 155 |
| Conread position: | 33-410 |
| Cow position: | chr25:28862893-28862477 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 33-410 |
| Cow position: | chr25:35567862-35568278 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 73, 165 |
| Conread position: | 33-410 |
| Cow position: | chr25:35755222-35755637 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-411 |
| Cow position: | chr25:12939186-12939602 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 71, 157 |
| Conread position: | 33-429 |
| Cow position: | chr25:17585999-17586434 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-429 |
| Cow position: | chr25:20633782-20633356 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 151 |
| Conread position: | 33-429 |
| Cow position: | chr25:26282046-26281614 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 34-325 |
| Cow position: | chr25:18208665-18208962 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 37-406 |
| Cow position: | chr25:18886464-18886857 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 40-424 |
| Cow position: | chr25:11665690-11665266 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 77, 414 |
| Conread position: | 45-297 |
| Cow position: | chr25:26896060-26895815 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 45-411 |
| Cow position: | chr25:29313310-29313706 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 144 |
| Conread position: | 46-289 |
| Cow position: | chr25:23672857-23673109 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 46-289 |
| Cow position: | chr25:24303257-24303512 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-391 |
| Cow position: | chr25:18072233-18071862 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 46-424 |
| Cow position: | chr25:23740239-23740651 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 47-411 |
| Cow position: | chr25:24731802-24732196 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 48-411 |
| Cow position: | chr25:21147253-21146868 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 53-280 |
| Cow position: | chr25:27536017-27536251 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 54-430 |
| Cow position: | chr25:33027261-33027663 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 123-390 |
| Cow position: | chr25:16923223-16923507 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 52 |
Show alignments to all cow chromosomes.