Cow genome map
| Conread name: | Ovi2-UMC-peov1-011-h11 |
| Conread position: | 1-429 |
| Cow position: | chr27:8297415-8297847 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 156, 34 |
| Conread position: | 15-424 |
| Cow position: | chr27:1904357-1904768 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 19-410 |
| Cow position: | chr27:3232292-3232714 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 22-378 |
| Cow position: | chr27:27278954-27278588 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 135, 155 |
| Conread position: | 22-389 |
| Cow position: | chr27:27045419-27045021 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 26-321 |
| Cow position: | chr27:16037730-16038036 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 25 |
| Conread position: | 29-288 |
| Cow position: | chr27:3760103-3759835 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 32-279 |
| Cow position: | chr27:19424144-19424405 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 158 |
| Conread position: | 33-266 |
| Cow position: | chr27:8291075-8290832 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 148 |
| Conread position: | 33-280 |
| Cow position: | chr27:4768667-4768407 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 33-282 |
| Cow position: | chr27:19932334-19932592 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr27:4982604-4982336 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr27:9989971-9990245 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 151 |
| Conread position: | 33-288 |
| Cow position: | chr27:15544247-15543979 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr27:20810653-20810385 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-288 |
| Cow position: | chr27:24296037-24296302 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 157 |
| Conread position: | 33-288 |
| Cow position: | chr27:26330164-26329897 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 131 |
| Conread position: | 33-302 |
| Cow position: | chr27:3990568-3990848 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 33-382 |
| Cow position: | chr27:15634110-15634489 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-382 |
| Cow position: | chr27:19523476-19523863 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-406 |
| Cow position: | chr27:4331508-4331919 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 33-409 |
| Cow position: | chr27:27291621-27291212 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 33-410 |
| Cow position: | chr27:5925505-5925090 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 33-412 |
| Cow position: | chr27:1536402-1535999 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 110, 159 |
| Conread position: | 33-429 |
| Cow position: | chr27:26856289-26855863 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 37-430 |
| Cow position: | chr27:16427891-16427472 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 45-277 |
| Cow position: | chr27:30307050-30307293 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 46-279 |
| Cow position: | chr27:13919848-13919611 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 129 |
| Conread position: | 46-280 |
| Cow position: | chr27:8726797-8726553 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 46-280 |
| Cow position: | chr27:10579166-10578918 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-282 |
| Cow position: | chr27:28895222-28894978 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 138 |
| Conread position: | 46-289 |
| Cow position: | chr27:5990827-5991079 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 126 |
| Conread position: | 46-389 |
| Cow position: | chr27:17568320-17567941 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 46-389 |
| Cow position: | chr27:26785041-26784660 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 46-430 |
| Cow position: | chr27:27501428-27501025 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 139 |
| Conread position: | 47-288 |
| Cow position: | chr27:8201156-8200902 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 47-289 |
| Cow position: | chr27:27557022-27556771 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 47-406 |
| Cow position: | chr27:12750242-12749854 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 70, 7 |
Show alignments to all cow chromosomes.