Cow genome map

Conread name: Ovi2-UMC-peov1-011-h11

Conread position: 1-170
Cow position: chr4:50838076-50837903 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 49

Conread position: 1-195
Cow position: chr4:42923183-42923372 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 41

Conread position: 1-288
Cow position: chr4:62223139-62222851 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 29

Conread position: 1-290
Cow position: chr4:38972617-38972331 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 155, 35

Conread position: 1-325
Cow position: chr4:65207464-65207806 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 106, 18

Conread position: 1-420
Cow position: chr4:3971384-3970949 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 49

Conread position: 14-429
Cow position: chr4:33069863-33070305 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 103, 39

Conread position: 19-280
Cow position: chr4:34700574-34700840 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 17

Conread position: 19-289
Cow position: chr4:39840686-39840411 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 98, 16

Conread position: 26-410
Cow position: chr4:3449772-3449349 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 30

Conread position: 31-288
Cow position: chr4:20657095-20657360 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 17

Conread position: 32-288
Cow position: chr4:42330752-42331021 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 85, 166

Conread position: 33-270
Cow position: chr4:10122374-10122128 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 149

Conread position: 33-280
Cow position: chr4:14919025-14918765 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 157

Conread position: 33-280
Cow position: chr4:41957729-41957470 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 148

Conread position: 33-282
Cow position: chr4:17919986-17920247 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr4:18813242-18813510 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr4:31562263-31562529 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr4:34712785-34712517 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr4:36026303-36026570 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 31

Conread position: 33-288
Cow position: chr4:43884061-43883794 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 157

Conread position: 33-288
Cow position: chr4:44733590-44733326 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 153

Conread position: 33-288
Cow position: chr4:44957443-44957711 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 157

Conread position: 33-288
Cow position: chr4:67681009-67681281 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 82, 157

Conread position: 33-289
Cow position: chr4:37786270-37786001 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 157

Conread position: 33-379
Cow position: chr4:3170250-3169865 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 158

Conread position: 33-382
Cow position: chr4:7779368-7778981 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 157

Conread position: 33-384
Cow position: chr4:18267060-18266671 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 157

Conread position: 33-389
Cow position: chr4:18096642-18097038 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 165

Conread position: 33-402
Cow position: chr4:47263745-47263338 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 116

Conread position: 33-402
Cow position: chr4:54931638-54932034 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 84, 157

Conread position: 33-404
Cow position: chr4:26745486-26745080 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 154

Conread position: 33-410
Cow position: chr4:1047296-1047698 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr4:3069885-3069475 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 152

Conread position: 33-410
Cow position: chr4:6487399-6487814 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr4:16363168-16362756 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 153

Conread position: 33-410
Cow position: chr4:17876925-17876522 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 150

Conread position: 33-410
Cow position: chr4:23304373-23304788 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 157

Conread position: 33-410
Cow position: chr4:25596517-25596933 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 73, 157

Conread position: 33-410
Cow position: chr4:33496529-33496114 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 22

Conread position: 33-410
Cow position: chr4:36899344-36898930 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 31

Conread position: 33-410
Cow position: chr4:61242249-61241835 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 27

Conread position: 33-410
Cow position: chr4:67383249-67382840 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 81, 147

Conread position: 33-412
Cow position: chr4:7214809-7215225 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 278
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 157

Conread position: 33-429
Cow position: chr4:12238266-12238691 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 104

Conread position: 33-429
Cow position: chr4:20243124-20242690 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 290
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 157

Conread position: 33-429
Cow position: chr4:29530489-29530922 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 157

Conread position: 37-280
Cow position: chr4:38909464-38909218 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 142

Conread position: 37-288
Cow position: chr4:10135238-10135501 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 80, 153

Conread position: 37-430
Cow position: chr4:43316685-43317119 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 149

Conread position: 39-429
Cow position: chr4:358849-358420 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 153

Conread position: 42-289
Cow position: chr4:11533867-11533624 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 114

Conread position: 44-410
Cow position: chr4:23452055-23452459 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 71, 146

Conread position: 46-278
Cow position: chr4:1028276-1028510 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 135

Conread position: 46-324
Cow position: chr4:3474631-3474348 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 114

Conread position: 46-383
Cow position: chr4:41190208-41190580 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 127

Conread position: 46-406
Cow position: chr4:46711651-46712039 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 144

Conread position: 46-410
Cow position: chr4:4379339-4378945 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 71, 127

Conread position: 46-410
Cow position: chr4:27177783-27177381 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 144

Conread position: 46-410
Cow position: chr4:48029813-48029415 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 71, 144

Conread position: 48-389
Cow position: chr4:2263756-2264129 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 144

Conread position: 53-288
Cow position: chr4:606553-606311 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 131

Conread position: 53-414
Cow position: chr4:453695-453316 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 68, 13

Conread position: 55-288
Cow position: chr4:56303098-56302855 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 134

Conread position: 55-410
Cow position: chr4:43896761-43897154 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 52, 142

Conread position: 55-421
Cow position: chr4:44066993-44067367 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 16

Conread position: 87-425
Cow position: chr4:38932262-38931898 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 21

Conread position: 118-416
Cow position: chr4:37442669-37442370 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 64

Conread position: 128-405
Cow position: chr4:45197007-45196715 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 56

Conread position: 182-411
Cow position: chr4:49990059-49990298 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 51

Show alignments to all cow chromosomes.