Cow genome map

Conread name: Ovi2-UMC-peov1-011-h11

Conread position: 1-424
Cow position: chr6:6165879-6165424 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 303
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 192

Conread position: 9-417
Cow position: chr6:31529649-31529209 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 301
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 15

Conread position: 22-280
Cow position: chr6:4903779-4904037 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 16

Conread position: 22-324
Cow position: chr6:16703526-16703839 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 16

Conread position: 26-280
Cow position: chr6:15924386-15924643 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 10

Conread position: 26-428
Cow position: chr6:366099-365667 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 9

Conread position: 30-410
Cow position: chr6:16593170-16592760 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 25

Conread position: 32-410
Cow position: chr6:21976159-21975745 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 157

Conread position: 33-268
Cow position: chr6:2186575-2186823 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 157

Conread position: 33-269
Cow position: chr6:1796834-1796585 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 157

Conread position: 33-282
Cow position: chr6:32420157-32419894 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 158

Conread position: 33-287
Cow position: chr6:27526756-27527019 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr6:3272275-3272541 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 26

Conread position: 33-288
Cow position: chr6:6182501-6182769 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr6:45937498-45937237 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 150

Conread position: 33-288
Cow position: chr6:48875133-48875392 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 118

Conread position: 33-288
Cow position: chr6:50571398-50571127 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 157

Conread position: 33-288
Cow position: chr6:58030984-58030719 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 155

Conread position: 33-289
Cow position: chr6:58016556-58016295 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 150

Conread position: 33-324
Cow position: chr6:8205395-8205082 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 84, 157

Conread position: 33-324
Cow position: chr6:10650586-10650893 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 150

Conread position: 33-378
Cow position: chr6:1536912-1536535 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 157

Conread position: 33-382
Cow position: chr6:28160616-28160232 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 157

Conread position: 33-384
Cow position: chr6:25374901-25375276 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 130

Conread position: 33-384
Cow position: chr6:55238897-55238514 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 86, 151

Conread position: 33-392
Cow position: chr6:60332550-60332153 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 157

Conread position: 33-406
Cow position: chr6:917250-916839 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 73, 157

Conread position: 33-406
Cow position: chr6:41231695-41231283 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 157

Conread position: 33-409
Cow position: chr6:40863822-40864239 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 284
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 73, 157

Conread position: 33-410
Cow position: chr6:478757-478343 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 22

Conread position: 33-410
Cow position: chr6:3485212-3485606 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 164

Conread position: 33-410
Cow position: chr6:15276033-15276447 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:17049580-17049163 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 153

Conread position: 33-410
Cow position: chr6:20451167-20450760 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:20553034-20553449 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:30269696-30270111 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 157

Conread position: 33-410
Cow position: chr6:34493882-34493469 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:34504314-34504730 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:34843506-34843920 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:41408612-41408198 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 128

Conread position: 33-410
Cow position: chr6:47040002-47040417 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 157

Conread position: 33-410
Cow position: chr6:55539064-55539477 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 157

Conread position: 33-410
Cow position: chr6:60876503-60876091 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 86, 151

Conread position: 33-415
Cow position: chr6:11722001-11722408 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 22

Conread position: 33-429
Cow position: chr6:5946568-5947001 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 295
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 157

Conread position: 33-429
Cow position: chr6:8536088-8536520 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 157

Conread position: 33-429
Cow position: chr6:15137966-15138391 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 157

Conread position: 33-429
Cow position: chr6:28102662-28103090 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 21

Conread position: 33-429
Cow position: chr6:41192533-41192096 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 294
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 157

Conread position: 33-429
Cow position: chr6:50485577-50485999 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 84

Conread position: 34-277
Cow position: chr6:18571378-18571628 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 150

Conread position: 34-281
Cow position: chr6:47025243-47024985 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 83, 142

Conread position: 35-425
Cow position: chr6:62852772-62852365 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 15

Conread position: 36-385
Cow position: chr6:35883777-35883389 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 151

Conread position: 37-410
Cow position: chr6:17121589-17121180 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 153

Conread position: 37-416
Cow position: chr6:6721173-6720767 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 283
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 152

Conread position: 45-280
Cow position: chr6:14147394-14147150 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 103

Conread position: 45-288
Cow position: chr6:27475605-27475351 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 9

Conread position: 45-389
Cow position: chr6:39331337-39331717 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 9

Conread position: 45-389
Cow position: chr6:50120732-50121114 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 9

Conread position: 45-421
Cow position: chr6:3886311-3886725 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 10

Conread position: 46-288
Cow position: chr6:34075062-34074807 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 144

Conread position: 46-289
Cow position: chr6:618608-618354 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 142

Conread position: 46-296
Cow position: chr6:47848714-47848973 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 104

Conread position: 46-377
Cow position: chr6:43087402-43087767 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 127

Conread position: 46-389
Cow position: chr6:12629096-12628719 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 144

Conread position: 46-389
Cow position: chr6:14144216-14143846 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 60, 105

Conread position: 46-398
Cow position: chr6:57182012-57181626 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 113

Conread position: 46-409
Cow position: chr6:40975380-40974979 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 71, 144

Conread position: 46-410
Cow position: chr6:24242483-24242083 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 143

Conread position: 46-410
Cow position: chr6:39999263-39999664 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 71, 144

Conread position: 46-410
Cow position: chr6:43790382-43790786 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 272
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 146

Conread position: 46-411
Cow position: chr6:7940594-7940995 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 149

Conread position: 46-414
Cow position: chr6:25790505-25790908 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 144

Conread position: 46-427
Cow position: chr6:182347-182765 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 71, 6

Conread position: 46-428
Cow position: chr6:31009624-31010032 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 139

Conread position: 46-431
Cow position: chr6:64571099-64570719 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 29

Conread position: 47-288
Cow position: chr6:44017635-44017889 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 70, 150

Conread position: 47-384
Cow position: chr6:39912517-39912143 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 115

Conread position: 47-404
Cow position: chr6:17595092-17595487 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 70, 143

Conread position: 47-411
Cow position: chr6:20611515-20611881 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 114

Conread position: 48-382
Cow position: chr6:65819388-65819759 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 142

Conread position: 48-387
Cow position: chr6:16050099-16050474 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 139

Conread position: 48-425
Cow position: chr6:52189796-52190201 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 49

Conread position: 49-280
Cow position: chr6:38438797-38438553 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 141

Conread position: 49-288
Cow position: chr6:9839944-9840190 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 62, 135

Conread position: 55-288
Cow position: chr6:47149785-47150030 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 105

Conread position: 58-288
Cow position: chr6:52696813-52696575 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 127

Conread position: 59-301
Cow position: chr6:15154290-15154035 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 116

Conread position: 81-410
Cow position: chr6:49165443-49165807 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 109

Conread position: 121-389
Cow position: chr6:8279660-8279947 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 61

Conread position: 128-426
Cow position: chr6:1735264-1734959 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 55

Show alignments to all cow chromosomes.