Cow genome map
| Conread name: | Ovi2-UMC-peov3-004-f11 |
| Conread position: | 1-134 |
| Cow position: | chr1:80438956-80438821 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 1-139 |
| Cow position: | chr1:92010119-92010261 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-148 |
| Cow position: | chr1:19545294-19545147 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 1-148 |
| Cow position: | chr1:31414153-31414009 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-152 |
| Cow position: | chr1:13056723-13056572 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 1-156 |
| Cow position: | chr1:81301289-81301134 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 1-156 |
| Cow position: | chr1:91816968-91816812 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 1-160 |
| Cow position: | chr1:6322016-6322168 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-160 |
| Cow position: | chr1:6941271-6941427 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-160 |
| Cow position: | chr1:6958684-6958840 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-160 |
| Cow position: | chr1:56634904-56635059 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 1-160 |
| Cow position: | chr1:70236486-70236324 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 1-161 |
| Cow position: | chr1:16973033-16972877 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-161 |
| Cow position: | chr1:77383566-77383731 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 1-161 |
| Cow position: | chr1:92551328-92551171 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-163 |
| Cow position: | chr1:14528394-14528229 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 1-163 |
| Cow position: | chr1:58889490-58889325 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 1-164 |
| Cow position: | chr1:9444044-9443881 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 1-164 |
| Cow position: | chr1:49131316-49131148 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-164 |
| Cow position: | chr1:57247243-57247400 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 1-164 |
| Cow position: | chr1:63504142-63504301 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 1-165 |
| Cow position: | chr1:7657507-7657344 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 1-165 |
| Cow position: | chr1:35844124-35843967 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 1-165 |
| Cow position: | chr1:41696860-41697028 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 1-165 |
| Cow position: | chr1:46839400-46839570 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-165 |
| Cow position: | chr1:77132410-77132572 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 1-165 |
| Cow position: | chr1:97422490-97422330 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:765767-765597 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:2765222-2765381 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:6795128-6794955 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 145 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:7143043-7142878 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 141 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:9533980-9534142 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 1-166 |
| Cow position: | chr1:15691143-15691303 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:20422400-20422235 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 1-166 |
| Cow position: | chr1:20521877-20521721 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:22777745-22777575 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:29975792-29975633 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:30413393-30413563 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 1-166 |
| Cow position: | chr1:31871226-31871395 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:32244599-32244430 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 144 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:41735819-41735654 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 1-166 |
| Cow position: | chr1:51836377-51836540 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 140 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:56073655-56073491 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 1-166 |
| Cow position: | chr1:56643783-56643620 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 1-166 |
| Cow position: | chr1:58825354-58825510 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:64189309-64189467 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:66355903-66355746 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:67994939-67995101 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 1-166 |
| Cow position: | chr1:80764729-80764568 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:81355898-81355739 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:81563538-81563706 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 1-166 |
| Cow position: | chr1:82443651-82443486 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 1-166 |
| Cow position: | chr1:85651955-85651799 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 148, 49 |
| Conread position: | 1-166 |
| Cow position: | chr1:85783331-85783494 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-166 |
| Cow position: | chr1:94526300-94526469 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 1-166 |
| Cow position: | chr1:95215380-95215211 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 1-166 |
| Cow position: | chr1:97785989-97786150 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 1-169 |
| Cow position: | chr1:70534128-70533968 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1-170 |
| Cow position: | chr1:76850918-76850752 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 1-172 |
| Cow position: | chr1:40497385-40497546 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:43872529-43872354 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 1-173 |
| Cow position: | chr1:25886269-25886101 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 1-173 |
| Cow position: | chr1:64099458-64099288 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 77 |
| Conread position: | 1-175 |
| Cow position: | chr1:634997-635171 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 92 |
| Conread position: | 1-175 |
| Cow position: | chr1:41004562-41004383 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 1-175 |
| Cow position: | chr1:78791500-78791327 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 1-175 |
| Cow position: | chr1:99208866-99208695 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 1-176 |
| Cow position: | chr1:73522338-73522167 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 1-177 |
| Cow position: | chr1:69415912-69415732 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-194 |
| Cow position: | chr1:6881418-6881229 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 169, 113 |
| Conread position: | 1-196 |
| Cow position: | chr1:55357480-55357286 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 112 |
| Conread position: | 1-273 |
| Cow position: | chr1:25183931-25184229 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-273 |
| Cow position: | chr1:61661501-61661208 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 1-273 |
| Cow position: | chr1:97620035-97619739 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 2-164 |
| Cow position: | chr1:13455950-13456107 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 124 |
| Conread position: | 2-166 |
| Cow position: | chr1:21934365-21934206 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 2-166 |
| Cow position: | chr1:53039893-53039731 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 2-166 |
| Cow position: | chr1:56408420-56408587 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 2-166 |
| Cow position: | chr1:71045561-71045724 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 2-166 |
| Cow position: | chr1:76096246-76096405 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 2-166 |
| Cow position: | chr1:89443670-89443512 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 2-166 |
| Cow position: | chr1:93110815-93110651 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-169 |
| Cow position: | chr1:50634599-50634428 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-173 |
| Cow position: | chr1:32341401-32341233 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 2-276 |
| Cow position: | chr1:4239344-4239629 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 3-129 |
| Cow position: | chr1:92642637-92642508 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-134 |
| Cow position: | chr1:4441298-4441165 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 3-160 |
| Cow position: | chr1:5162245-5162085 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 3-160 |
| Cow position: | chr1:79278638-79278483 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 3-163 |
| Cow position: | chr1:67014191-67014349 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 3-165 |
| Cow position: | chr1:5061829-5061996 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-165 |
| Cow position: | chr1:78750883-78750718 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-166 |
| Cow position: | chr1:7800416-7800583 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-166 |
| Cow position: | chr1:23099706-23099869 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 3-166 |
| Cow position: | chr1:25793631-25793465 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 3-166 |
| Cow position: | chr1:75443609-75443451 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 3-166 |
| Cow position: | chr1:77118720-77118566 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-166 |
| Cow position: | chr1:80973806-80973636 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 3-166 |
| Cow position: | chr1:85411387-85411547 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-166 |
| Cow position: | chr1:90423278-90423114 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 3-166 |
| Cow position: | chr1:95765281-95765120 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 3-169 |
| Cow position: | chr1:26688670-26688502 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 3-169 |
| Cow position: | chr1:54163002-54162834 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 3-169 |
| Cow position: | chr1:64939135-64938969 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 3-172 |
| Cow position: | chr1:71135960-71136125 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 3-172 |
| Cow position: | chr1:82370560-82370716 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-175 |
| Cow position: | chr1:84015679-84015857 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 3-182 |
| Cow position: | chr1:62732383-62732562 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 92 |
| Conread position: | 3-185 |
| Cow position: | chr1:17291835-17291654 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 160, 83 |
| Conread position: | 3-189 |
| Cow position: | chr1:9870045-9869855 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-275 |
| Cow position: | chr1:98613049-98613312 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 193, 130 |
| Conread position: | 4-160 |
| Cow position: | chr1:22448778-22448623 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 4-165 |
| Cow position: | chr1:13810457-13810620 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 4-165 |
| Cow position: | chr1:95467532-95467364 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-175 |
| Cow position: | chr1:42174780-42174611 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 169, 52 |
| Conread position: | 6-166 |
| Cow position: | chr1:89548000-89548161 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 6-166 |
| Cow position: | chr1:101812468-101812306 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 7-166 |
| Cow position: | chr1:31399414-31399255 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 88 |
| Conread position: | 8-136 |
| Cow position: | chr1:20581761-20581889 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-126 |
| Cow position: | chr1:81161826-81161941 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 10-130 |
| Cow position: | chr1:102642692-102642816 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 10-166 |
| Cow position: | chr1:2997758-2997916 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 10-166 |
| Cow position: | chr1:84235516-84235362 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 10-190 |
| Cow position: | chr1:71302945-71303123 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 10-200 |
| Cow position: | chr1:74947312-74947123 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 12-112 |
| Cow position: | chr1:47117586-47117486 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-166 |
| Cow position: | chr1:8869840-8869693 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 16-171 |
| Cow position: | chr1:60532363-60532519 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 17-169 |
| Cow position: | chr1:45638305-45638461 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 17-172 |
| Cow position: | chr1:5278595-5278437 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 17-275 |
| Cow position: | chr1:75198966-75199225 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 150, 73 |
| Conread position: | 18-166 |
| Cow position: | chr1:13195602-13195451 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 18-166 |
| Cow position: | chr1:68619115-68618963 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 18-173 |
| Cow position: | chr1:99807905-99807744 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 18-175 |
| Cow position: | chr1:10719659-10719501 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 18-175 |
| Cow position: | chr1:89082930-89083088 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 19-154 |
| Cow position: | chr1:61225133-61225268 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 20-147 |
| Cow position: | chr1:14981297-14981170 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 20-166 |
| Cow position: | chr1:29916235-29916378 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 21-166 |
| Cow position: | chr1:8192904-8192763 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 21-166 |
| Cow position: | chr1:42398371-42398224 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 72 |
| Conread position: | 24-192 |
| Cow position: | chr1:57900910-57900744 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 26-166 |
| Cow position: | chr1:57782840-57782974 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 27-163 |
| Cow position: | chr1:4175437-4175307 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 27-273 |
| Cow position: | chr1:67407356-67407085 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 29-166 |
| Cow position: | chr1:46205653-46205788 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 31-166 |
| Cow position: | chr1:75347456-75347591 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-166 |
| Cow position: | chr1:90413215-90413349 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 33-166 |
| Cow position: | chr1:52449770-52449637 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-160 |
| Cow position: | chr1:63905630-63905508 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 36-164 |
| Cow position: | chr1:63363012-63362892 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 40-166 |
| Cow position: | chr1:101771753-101771873 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 49-166 |
| Cow position: | chr1:29657681-29657797 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 49-166 |
| Cow position: | chr1:38692517-38692634 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-275 |
| Cow position: | chr1:97603749-97603518 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 53-175 |
| Cow position: | chr1:6734322-6734443 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 56-163 |
| Cow position: | chr1:25610615-25610508 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-166 |
| Cow position: | chr1:44746733-44746834 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 73-165 |
| Cow position: | chr1:48411400-48411307 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 73-230 |
| Cow position: | chr1:67564976-67564816 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 41 |
Show alignments to all cow chromosomes.