Cow genome map

Conread name: Ovi2-UMC-peov3-004-f11

Conread position: 1-129
Cow position: chr12:7131832-7131708 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 111
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 1-134
Cow position: chr12:40824330-40824189 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-144
Cow position: chr12:41642196-41642336 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 88, 61

Conread position: 1-148
Cow position: chr12:15232049-15232196 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 36

Conread position: 1-154
Cow position: chr12:30064705-30064861 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-158
Cow position: chr12:5797783-5797635 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 1-159
Cow position: chr12:30688099-30688260 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 79

Conread position: 1-160
Cow position: chr12:33323738-33323576 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 115

Conread position: 1-161
Cow position: chr12:27055367-27055525 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 137

Conread position: 1-164
Cow position: chr12:1223582-1223420 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 117, 35

Conread position: 1-164
Cow position: chr12:28559056-28559219 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 103

Conread position: 1-164
Cow position: chr12:35807437-35807603 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 140
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 82

Conread position: 1-165
Cow position: chr12:21828845-21829011 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 118

Conread position: 1-165
Cow position: chr12:24559114-24559280 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 96

Conread position: 1-166
Cow position: chr12:1487798-1487968 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 65

Conread position: 1-166
Cow position: chr12:8869122-8868952 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 117

Conread position: 1-166
Cow position: chr12:14523685-14523867 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 1-166
Cow position: chr12:16851248-16851084 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 113, 0

Conread position: 1-166
Cow position: chr12:18417324-18417495 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 141
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 1-166
Cow position: chr12:18769313-18769148 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 146
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-166
Cow position: chr12:25312616-25312446 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 154

Conread position: 1-166
Cow position: chr12:26869038-26868869 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 117

Conread position: 1-166
Cow position: chr12:27039006-27038831 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 12

Conread position: 1-166
Cow position: chr12:35354546-35354712 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 120

Conread position: 1-166
Cow position: chr12:38484637-38484467 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 30

Conread position: 1-166
Cow position: chr12:47800057-47799900 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-172
Cow position: chr12:32987455-32987631 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 90, 45

Conread position: 1-172
Cow position: chr12:40270325-40270161 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 20

Conread position: 1-175
Cow position: chr12:245929-245757 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 18

Conread position: 1-175
Cow position: chr12:35707166-35706996 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 46

Conread position: 1-177
Cow position: chr12:18081782-18081614 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 1-184
Cow position: chr12:16543808-16543633 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 53

Conread position: 1-187
Cow position: chr12:3212086-3212273 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 169

Conread position: 1-189
Cow position: chr12:3757273-3757090 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 35

Conread position: 1-273
Cow position: chr12:794311-794599 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 114, 256

Conread position: 1-273
Cow position: chr12:12939170-12938891 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 172

Conread position: 1-275
Cow position: chr12:15622696-15622397 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 2-143
Cow position: chr12:11498298-11498161 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 2-165
Cow position: chr12:23379333-23379501 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 2-166
Cow position: chr12:20312405-20312250 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 79

Conread position: 2-273
Cow position: chr12:45541493-45541782 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 86

Conread position: 3-165
Cow position: chr12:34103372-34103210 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 138

Conread position: 4-168
Cow position: chr12:27938675-27938842 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 4-177
Cow position: chr12:41979540-41979362 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 7-175
Cow position: chr12:25619611-25619439 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 10-166
Cow position: chr12:6117670-6117827 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 136
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 105

Conread position: 10-277
Cow position: chr12:35984901-35985183 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 18-164
Cow position: chr12:37394483-37394640 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 19-273
Cow position: chr12:21862005-21861733 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 94, 43

Conread position: 21-161
Cow position: chr12:34089617-34089762 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 21-164
Cow position: chr12:39753650-39753790 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 21-177
Cow position: chr12:36544868-36544715 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 75

Conread position: 22-165
Cow position: chr12:27495787-27495935 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 29-166
Cow position: chr12:11696464-11696605 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.