Cow genome map
| Conread name: | Ovi2-UMC-peov3-004-f11 |
| Conread position: | 1-126 |
| Cow position: | chr14:3642614-3642743 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 1-154 |
| Cow position: | chr14:4369817-4369969 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 1-157 |
| Cow position: | chr14:37333935-37333778 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 136 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-160 |
| Cow position: | chr14:8750318-8750160 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 110, 85 |
| Conread position: | 1-160 |
| Cow position: | chr14:11819880-11820038 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 95 |
| Conread position: | 1-161 |
| Cow position: | chr14:39807215-39807374 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 1-163 |
| Cow position: | chr14:23107573-23107409 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-164 |
| Cow position: | chr14:14182586-14182429 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-164 |
| Cow position: | chr14:34221298-34221136 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 139 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 113, 128 |
| Conread position: | 1-165 |
| Cow position: | chr14:8488429-8488266 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 1-165 |
| Cow position: | chr14:25378247-25378415 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-165 |
| Cow position: | chr14:26960195-26960347 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-165 |
| Cow position: | chr14:34163631-34163792 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-165 |
| Cow position: | chr14:37678754-37678922 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 1-166 |
| Cow position: | chr14:7813332-7813491 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 1-166 |
| Cow position: | chr14:11614977-11615139 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 1-166 |
| Cow position: | chr14:12488458-12488620 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:18448765-18448932 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:19129755-19129588 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 1-166 |
| Cow position: | chr14:19957667-19957833 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 148, 90 |
| Conread position: | 1-166 |
| Cow position: | chr14:21018356-21018191 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 90 |
| Conread position: | 1-166 |
| Cow position: | chr14:25458565-25458407 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:26448992-26448828 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 129, 110 |
| Conread position: | 1-166 |
| Cow position: | chr14:26628080-26627912 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 1-166 |
| Cow position: | chr14:29605992-29606154 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:31785220-31785046 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:31888462-31888623 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:34777335-34777497 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 1-166 |
| Cow position: | chr14:35700675-35700505 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:36440152-36439991 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 1-166 |
| Cow position: | chr14:45292677-45292840 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 1-166 |
| Cow position: | chr14:46751921-46751757 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 93 |
| Conread position: | 1-166 |
| Cow position: | chr14:46962784-46962614 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:47138555-47138723 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-166 |
| Cow position: | chr14:47604056-47604218 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 1-169 |
| Cow position: | chr14:20069277-20069440 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 1-172 |
| Cow position: | chr14:35605065-35605239 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 133 |
| Conread position: | 1-174 |
| Cow position: | chr14:9020271-9020098 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 1-175 |
| Cow position: | chr14:7582197-7582382 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-175 |
| Cow position: | chr14:47974223-47974052 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 1-182 |
| Cow position: | chr14:9875633-9875456 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-184 |
| Cow position: | chr14:12602120-12601936 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 132, 175 |
| Conread position: | 1-273 |
| Cow position: | chr14:31399819-31399525 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-273 |
| Cow position: | chr14:43565656-43565949 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 2-162 |
| Cow position: | chr14:37624245-37624402 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 48 |
| Conread position: | 2-166 |
| Cow position: | chr14:10906961-10906794 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 2-166 |
| Cow position: | chr14:12559242-12559401 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 2-166 |
| Cow position: | chr14:15514262-15514094 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-166 |
| Cow position: | chr14:27104337-27104160 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 105 |
| Conread position: | 2-166 |
| Cow position: | chr14:27919495-27919657 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 2-273 |
| Cow position: | chr14:283518-283783 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 3-157 |
| Cow position: | chr14:24837717-24837865 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 3-164 |
| Cow position: | chr14:6984725-6984883 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 3-166 |
| Cow position: | chr14:724553-724392 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 3-166 |
| Cow position: | chr14:1553989-1553828 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 3-166 |
| Cow position: | chr14:22909525-22909681 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-166 |
| Cow position: | chr14:39877367-39877516 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-166 |
| Cow position: | chr14:45605332-45605170 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 3-168 |
| Cow position: | chr14:14222017-14221848 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-173 |
| Cow position: | chr14:25362589-25362418 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 3-273 |
| Cow position: | chr14:1706520-1706227 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 6-169 |
| Cow position: | chr14:47483934-47483769 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 141 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 10-166 |
| Cow position: | chr14:17651604-17651757 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 12-166 |
| Cow position: | chr14:33337246-33337403 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 13-166 |
| Cow position: | chr14:35711947-35712100 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-142 |
| Cow position: | chr14:10742736-10742609 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 15-166 |
| Cow position: | chr14:19887995-19888156 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 18-160 |
| Cow position: | chr14:18238371-18238227 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 18-166 |
| Cow position: | chr14:43032035-43031878 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 20-160 |
| Cow position: | chr14:20640404-20640542 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 20-171 |
| Cow position: | chr14:10090778-10090625 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 21-166 |
| Cow position: | chr14:41654172-41654320 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 22-169 |
| Cow position: | chr14:32581159-32581301 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 27-166 |
| Cow position: | chr14:6208128-6208263 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 34-164 |
| Cow position: | chr14:48517132-48517008 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 42-177 |
| Cow position: | chr14:35819410-35819541 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 52-273 |
| Cow position: | chr14:18093712-18093918 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 168, 65 |
| Conread position: | 64-163 |
| Cow position: | chr14:8518390-8518489 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.