Cow genome map

Conread name: Ovi2-UMC-peov3-004-f11

Conread position: 1-134
Cow position: chr15:34255457-34255586 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 1-136
Cow position: chr15:26673305-26673436 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 80

Conread position: 1-155
Cow position: chr15:34036901-34037059 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 45

Conread position: 1-160
Cow position: chr15:1329809-1329971 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 115

Conread position: 1-164
Cow position: chr15:9928648-9928487 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 74

Conread position: 1-164
Cow position: chr15:22886839-22886677 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 35

Conread position: 1-165
Cow position: chr15:1298027-1297864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 70

Conread position: 1-165
Cow position: chr15:26421306-26421473 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 138
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 1-165
Cow position: chr15:27247803-27247628 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 1-165
Cow position: chr15:31599623-31599459 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 17

Conread position: 1-165
Cow position: chr15:31907940-31907774 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 18

Conread position: 1-165
Cow position: chr15:38394710-38394544 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 92

Conread position: 1-166
Cow position: chr15:794723-794889 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 104

Conread position: 1-166
Cow position: chr15:3572414-3572576 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 115, 45

Conread position: 1-166
Cow position: chr15:4373765-4373601 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 113

Conread position: 1-166
Cow position: chr15:9177923-9178083 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 118, 61

Conread position: 1-166
Cow position: chr15:9642726-9642555 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-166
Cow position: chr15:10615451-10615606 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 1-166
Cow position: chr15:15215310-15215145 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-166
Cow position: chr15:20117399-20117236 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 46

Conread position: 1-166
Cow position: chr15:27863032-27863199 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 132

Conread position: 1-166
Cow position: chr15:31857882-31857715 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 116

Conread position: 1-166
Cow position: chr15:36671744-36671912 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 135

Conread position: 1-166
Cow position: chr15:37964831-37964658 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 1-166
Cow position: chr15:43248481-43248646 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-166
Cow position: chr15:44252653-44252489 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 118, 123

Conread position: 1-166
Cow position: chr15:51583513-51583354 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 8

Conread position: 1-169
Cow position: chr15:22532531-22532360 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 99

Conread position: 1-169
Cow position: chr15:22713540-22713707 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 89

Conread position: 1-169
Cow position: chr15:37632585-37632758 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 1-169
Cow position: chr15:52154499-52154670 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 73

Conread position: 1-172
Cow position: chr15:11574240-11574078 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 41

Conread position: 1-172
Cow position: chr15:28236609-28236774 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 1-172
Cow position: chr15:39363726-39363894 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 163, 110

Conread position: 1-175
Cow position: chr15:8937289-8937128 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-175
Cow position: chr15:26701786-26701961 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 97

Conread position: 1-176
Cow position: chr15:12163231-12163403 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 1-176
Cow position: chr15:47634373-47634202 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 68, 20

Conread position: 1-177
Cow position: chr15:12304931-12304757 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 95

Conread position: 1-180
Cow position: chr15:17683319-17683140 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 126

Conread position: 1-181
Cow position: chr15:14322773-14322944 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 108

Conread position: 1-189
Cow position: chr15:20725324-20725516 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 112

Conread position: 1-191
Cow position: chr15:26734900-26734727 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 1-270
Cow position: chr15:33680938-33680673 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 208, 85

Conread position: 1-277
Cow position: chr15:23139865-23140151 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 56

Conread position: 1-277
Cow position: chr15:24976901-24977202 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 2-117
Cow position: chr15:50964555-50964436 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 2-125
Cow position: chr15:22607096-22606974 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 111, 62

Conread position: 2-164
Cow position: chr15:44209860-44209694 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 2-166
Cow position: chr15:5527477-5527309 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 2-166
Cow position: chr15:20482548-20482720 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 2-166
Cow position: chr15:21836978-21836807 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 113, 36

Conread position: 2-168
Cow position: chr15:6282647-6282808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 2-172
Cow position: chr15:16741748-16741918 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 93

Conread position: 2-172
Cow position: chr15:53118611-53118441 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 68, 102

Conread position: 2-175
Cow position: chr15:24285274-24285097 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 2-175
Cow position: chr15:24411694-24411531 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 3-164
Cow position: chr15:11957829-11957668 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 59

Conread position: 3-165
Cow position: chr15:17213740-17213577 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 66

Conread position: 3-166
Cow position: chr15:27282093-27281927 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 143
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 57

Conread position: 3-166
Cow position: chr15:27732686-27732539 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 3-166
Cow position: chr15:31157403-31157236 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 3-166
Cow position: chr15:40009362-40009525 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 94

Conread position: 3-177
Cow position: chr15:35041582-35041761 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 3-248
Cow position: chr15:7980438-7980194 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 90

Conread position: 4-165
Cow position: chr15:21894069-21893908 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 109

Conread position: 4-166
Cow position: chr15:1830852-1830686 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 4-172
Cow position: chr15:13545385-13545229 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 4-186
Cow position: chr15:6628003-6628180 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 15

Conread position: 5-166
Cow position: chr15:29272477-29272314 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 7-155
Cow position: chr15:20347538-20347384 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 124

Conread position: 7-165
Cow position: chr15:39894872-39894714 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-177
Cow position: chr15:31182706-31182540 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 116

Conread position: 12-165
Cow position: chr15:2210852-2210700 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 125, 26

Conread position: 12-166
Cow position: chr15:9072150-9072304 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 13-154
Cow position: chr15:17150223-17150371 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 15-162
Cow position: chr15:4857065-4856917 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 18-160
Cow position: chr15:53045602-53045746 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 89

Conread position: 18-164
Cow position: chr15:4277791-4277936 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 41, 28

Conread position: 18-165
Cow position: chr15:22854681-22854530 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 18-166
Cow position: chr15:23957976-23957828 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 18-180
Cow position: chr15:15922266-15922104 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 123

Conread position: 19-154
Cow position: chr15:10189463-10189602 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 19-196
Cow position: chr15:12673916-12673742 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 116

Conread position: 21-165
Cow position: chr15:50994016-50993864 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 22-175
Cow position: chr15:17124764-17124918 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 78

Conread position: 24-166
Cow position: chr15:52739854-52739997 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 128

Conread position: 34-164
Cow position: chr15:33770874-33770744 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 114
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 39-165
Cow position: chr15:5722415-5722543 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 49-166
Cow position: chr15:16585756-16585634 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 58-166
Cow position: chr15:16825065-16824957 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.