Cow genome map
| Conread name: | Ovi2-UMC-peov3-004-f11 |
| Conread position: | 1-130 |
| Cow position: | chr20:3891883-3892012 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-154 |
| Cow position: | chr20:12363021-12362871 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 1-158 |
| Cow position: | chr20:19265999-19266153 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 1-160 |
| Cow position: | chr20:14806728-14806886 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 107 |
| Conread position: | 1-161 |
| Cow position: | chr20:14865336-14865175 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 1-161 |
| Cow position: | chr20:38028165-38028010 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 107 |
| Conread position: | 1-165 |
| Cow position: | chr20:7182834-7182669 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 1-165 |
| Cow position: | chr20:14831770-14831609 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:3321296-3321135 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:4895051-4894887 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 1-166 |
| Cow position: | chr20:6571174-6571334 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:10034086-10033916 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:15073990-15073829 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:15577049-15576881 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 1-166 |
| Cow position: | chr20:18413696-18413861 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 1-166 |
| Cow position: | chr20:26076926-26077087 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:26881072-26880902 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:32862151-32861992 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:33178683-33178514 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 1-166 |
| Cow position: | chr20:33435325-33435160 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 1-169 |
| Cow position: | chr20:27977868-27977698 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 1-172 |
| Cow position: | chr20:13048576-13048401 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-175 |
| Cow position: | chr20:24391822-24391995 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 1-175 |
| Cow position: | chr20:27001235-27001410 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 1-175 |
| Cow position: | chr20:28067584-28067411 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-177 |
| Cow position: | chr20:15593138-15593311 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 77 |
| Conread position: | 1-177 |
| Cow position: | chr20:19328241-19328420 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 111, 73 |
| Conread position: | 1-184 |
| Cow position: | chr20:25823120-25823308 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 166 |
| Conread position: | 1-193 |
| Cow position: | chr20:29308663-29308467 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 1-201 |
| Cow position: | chr20:22445793-22445596 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-273 |
| Cow position: | chr20:19351926-19351628 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 43, 279 |
| Conread position: | 2-110 |
| Cow position: | chr20:30856140-30856032 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-164 |
| Cow position: | chr20:35897361-35897523 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-166 |
| Cow position: | chr20:12041304-12041143 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 2-175 |
| Cow position: | chr20:19238589-19238413 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 2-175 |
| Cow position: | chr20:41500701-41500523 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-166 |
| Cow position: | chr20:614509-614673 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 3-166 |
| Cow position: | chr20:4359811-4359654 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-166 |
| Cow position: | chr20:17670026-17670188 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 3-166 |
| Cow position: | chr20:20471631-20471788 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 3-172 |
| Cow position: | chr20:38123728-38123902 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 3-273 |
| Cow position: | chr20:14471705-14471416 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 4-169 |
| Cow position: | chr20:42138215-42138383 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-180 |
| Cow position: | chr20:220462-220642 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-277 |
| Cow position: | chr20:40559384-40559654 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 6-139 |
| Cow position: | chr20:18491032-18491165 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 9-166 |
| Cow position: | chr20:24234010-24234162 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 9-177 |
| Cow position: | chr20:17474938-17474770 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 10-138 |
| Cow position: | chr20:38858557-38858434 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 10-166 |
| Cow position: | chr20:14735527-14735682 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 10-169 |
| Cow position: | chr20:7600931-7600772 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-164 |
| Cow position: | chr20:19340010-19339868 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 16-175 |
| Cow position: | chr20:16585781-16585617 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 18-166 |
| Cow position: | chr20:14679477-14679627 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 18-172 |
| Cow position: | chr20:8261766-8261921 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 22-149 |
| Cow position: | chr20:34178614-34178486 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 33-166 |
| Cow position: | chr20:37609105-37609237 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 38-277 |
| Cow position: | chr20:11355097-11355348 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 132, 36 |
| Conread position: | 41-164 |
| Cow position: | chr20:23234917-23235040 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 50-169 |
| Cow position: | chr20:39056151-39056032 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-172 |
| Cow position: | chr20:12676349-12676457 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-166 |
| Cow position: | chr20:15917888-15917989 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 86-166 |
| Cow position: | chr20:7062308-7062388 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 72 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.