Cow genome map
| Conread name: | Ovi2-UMC-peov3-004-f11 |
| Conread position: | 1-142 |
| Cow position: | chr22:18608459-18608325 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 1-153 |
| Cow position: | chr22:13274267-13274417 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-156 |
| Cow position: | chr22:15623114-15623274 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 156 |
| Conread position: | 1-160 |
| Cow position: | chr22:10685292-10685136 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-160 |
| Cow position: | chr22:26658851-26659008 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-161 |
| Cow position: | chr22:25784131-25783968 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-161 |
| Cow position: | chr22:39472580-39472421 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-163 |
| Cow position: | chr22:7518212-7518378 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 1-164 |
| Cow position: | chr22:13187676-13187837 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 1-164 |
| Cow position: | chr22:27223929-27224084 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-165 |
| Cow position: | chr22:2913074-2913237 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 1-165 |
| Cow position: | chr22:4161817-4161652 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 1-165 |
| Cow position: | chr22:23581040-23580882 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:5622923-5622757 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:16251771-16251605 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 1-166 |
| Cow position: | chr22:19040573-19040406 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 125 |
| Conread position: | 1-166 |
| Cow position: | chr22:19653189-19653025 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:22997275-22997438 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:25714806-25714963 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:26081103-26080930 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:26941594-26941751 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 1-166 |
| Cow position: | chr22:27791262-27791426 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 119 |
| Conread position: | 1-166 |
| Cow position: | chr22:33918103-33917937 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 143 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 1-166 |
| Cow position: | chr22:35382456-35382287 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 1-166 |
| Cow position: | chr22:39293951-39293788 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 143 |
| Conread position: | 1-166 |
| Cow position: | chr22:39303210-39303042 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 1-166 |
| Cow position: | chr22:39452384-39452558 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chr22:40374402-40374568 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 89 |
| Conread position: | 1-169 |
| Cow position: | chr22:19207765-19207938 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 1-169 |
| Cow position: | chr22:44835438-44835610 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 1-171 |
| Cow position: | chr22:11746111-11745941 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 1-171 |
| Cow position: | chr22:26057186-26057343 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-174 |
| Cow position: | chr22:9155571-9155397 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 1-174 |
| Cow position: | chr22:26141068-26141244 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 1-175 |
| Cow position: | chr22:33422327-33422147 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 127 |
| Conread position: | 1-176 |
| Cow position: | chr22:23618510-23618330 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-177 |
| Cow position: | chr22:10683869-10683693 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 152 |
| Conread position: | 1-248 |
| Cow position: | chr22:31149225-31149470 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 124 |
| Conread position: | 1-273 |
| Cow position: | chr22:25311750-25311452 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-273 |
| Cow position: | chr22:27514459-27514744 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 2-162 |
| Cow position: | chr22:19738781-19738616 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-165 |
| Cow position: | chr22:33201283-33201453 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 155 |
| Conread position: | 2-165 |
| Cow position: | chr22:44924265-44924101 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 2-166 |
| Cow position: | chr22:1227-1388 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 2-166 |
| Cow position: | chr22:14118771-14118939 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-160 |
| Cow position: | chr22:15398780-15398622 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-163 |
| Cow position: | chr22:42933690-42933523 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-164 |
| Cow position: | chr22:7302045-7301875 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-166 |
| Cow position: | chr22:23861349-23861190 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 3-166 |
| Cow position: | chr22:31497305-31497145 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 3-166 |
| Cow position: | chr22:37554828-37554662 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 106 |
| Conread position: | 3-169 |
| Cow position: | chr22:4650979-4651144 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 138 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 4-166 |
| Cow position: | chr22:2476412-2476250 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-166 |
| Cow position: | chr22:6574542-6574700 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 4-169 |
| Cow position: | chr22:7979510-7979667 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 5-160 |
| Cow position: | chr22:24185606-24185456 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-153 |
| Cow position: | chr22:16650402-16650251 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 7-121 |
| Cow position: | chr22:10065094-10064981 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 7-166 |
| Cow position: | chr22:11778813-11778650 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-166 |
| Cow position: | chr22:35520461-35520296 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 9-166 |
| Cow position: | chr22:4028610-4028772 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 107, 83 |
| Conread position: | 10-165 |
| Cow position: | chr22:23010134-23009980 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 10-166 |
| Cow position: | chr22:15666020-15666171 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 12-163 |
| Cow position: | chr22:15358043-15358200 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 13-162 |
| Cow position: | chr22:9466423-9466567 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 119, 40 |
| Conread position: | 14-169 |
| Cow position: | chr22:15428636-15428484 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 152, 79 |
| Conread position: | 18-165 |
| Cow position: | chr22:1848877-1849030 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 18-168 |
| Cow position: | chr22:42605441-42605592 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 20-163 |
| Cow position: | chr22:19592228-19592380 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 21-166 |
| Cow position: | chr22:41684469-41684327 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 123 |
| Conread position: | 26-166 |
| Cow position: | chr22:33386687-33386547 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 35-166 |
| Cow position: | chr22:13057868-13057736 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 42-166 |
| Cow position: | chr22:32221480-32221604 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-166 |
| Cow position: | chr22:139465-139342 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 49-165 |
| Cow position: | chr22:13235382-13235498 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-275 |
| Cow position: | chr22:23730206-23730418 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 169-273 |
| Cow position: | chr22:39601403-39601510 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.