Cow genome map
| Conread name: | Ovi2-UMC-peov3-004-f11 |
| Conread position: | 1-153 |
| Cow position: | chr23:22660769-22660628 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 1-156 |
| Cow position: | chr23:3715565-3715725 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-157 |
| Cow position: | chr23:11404460-11404299 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-158 |
| Cow position: | chr23:20173005-20173157 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 1-162 |
| Cow position: | chr23:19636463-19636299 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 1-165 |
| Cow position: | chr23:9595029-9594865 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 95 |
| Conread position: | 1-165 |
| Cow position: | chr23:26066921-26067073 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-165 |
| Cow position: | chr23:36146654-36146495 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 1-166 |
| Cow position: | chr23:12369579-12369418 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-166 |
| Cow position: | chr23:16058400-16058558 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 1-166 |
| Cow position: | chr23:16237459-16237286 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-166 |
| Cow position: | chr23:18296608-18296774 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 107, 89 |
| Conread position: | 1-166 |
| Cow position: | chr23:20781625-20781785 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 93 |
| Conread position: | 1-166 |
| Cow position: | chr23:25407651-25407483 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 1-166 |
| Cow position: | chr23:28895167-28894992 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 1-166 |
| Cow position: | chr23:31897529-31897693 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 137, 85 |
| Conread position: | 1-166 |
| Cow position: | chr23:32662376-32662543 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 1-166 |
| Cow position: | chr23:38455384-38455216 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 1-166 |
| Cow position: | chr23:38854934-38854771 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-166 |
| Cow position: | chr23:40862140-40862309 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-166 |
| Cow position: | chr23:40891162-40891325 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-166 |
| Cow position: | chr23:41590110-41589951 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 1-169 |
| Cow position: | chr23:12408710-12408541 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 1-169 |
| Cow position: | chr23:22588469-22588296 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-169 |
| Cow position: | chr23:38248701-38248862 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-171 |
| Cow position: | chr23:1991626-1991458 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 1-174 |
| Cow position: | chr23:1924035-1923863 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-175 |
| Cow position: | chr23:16610009-16609833 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-177 |
| Cow position: | chr23:20752813-20752990 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-182 |
| Cow position: | chr23:9641617-9641439 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 1-273 |
| Cow position: | chr23:23470744-23471024 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 6 |
| Conread position: | 1-274 |
| Cow position: | chr23:32148536-32148236 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-160 |
| Cow position: | chr23:35177120-35177277 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 2-166 |
| Cow position: | chr23:25189142-25189310 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 2-172 |
| Cow position: | chr23:21452931-21452760 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 2-175 |
| Cow position: | chr23:25408637-25408807 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 2-273 |
| Cow position: | chr23:11564540-11564264 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 3-152 |
| Cow position: | chr23:14662194-14662053 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 3-152 |
| Cow position: | chr23:30307709-30307862 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 3-162 |
| Cow position: | chr23:9711786-9711621 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-166 |
| Cow position: | chr23:18491970-18492132 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 3-166 |
| Cow position: | chr23:31607356-31607186 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 3-166 |
| Cow position: | chr23:37190771-37190620 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-169 |
| Cow position: | chr23:10415223-10415059 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 6-165 |
| Cow position: | chr23:37224260-37224103 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 7-169 |
| Cow position: | chr23:30773872-30773709 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 140 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 8-132 |
| Cow position: | chr23:16793406-16793531 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 14-164 |
| Cow position: | chr23:1203908-1203748 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 18-156 |
| Cow position: | chr23:24509516-24509657 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 18-166 |
| Cow position: | chr23:25531627-25531483 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 19-166 |
| Cow position: | chr23:15872882-15872731 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 19-177 |
| Cow position: | chr23:7321982-7321828 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 20-164 |
| Cow position: | chr23:30210525-30210380 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 20-166 |
| Cow position: | chr23:14126388-14126533 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 22-178 |
| Cow position: | chr23:40651640-40651485 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 34-166 |
| Cow position: | chr23:6592869-6592734 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 62-169 |
| Cow position: | chr23:38058484-38058376 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 64-166 |
| Cow position: | chr23:496513-496411 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-273 |
| Cow position: | chr23:17474724-17474525 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 14 |
Show alignments to all cow chromosomes.