Cow genome map
| Conread name: | Ovi2-UMC-peov3-004-f11 |
| Conread position: | 1-126 |
| Cow position: | chr25:22910049-22909922 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-135 |
| Cow position: | chr25:33260537-33260668 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-145 |
| Cow position: | chr25:10205082-10204937 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-160 |
| Cow position: | chr25:20076294-20076448 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-160 |
| Cow position: | chr25:25827259-25827424 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 1-166 |
| Cow position: | chr25:4002593-4002762 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 1-166 |
| Cow position: | chr25:8512298-8512129 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:10748708-10748534 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 1-166 |
| Cow position: | chr25:12204267-12204431 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 1-166 |
| Cow position: | chr25:12234961-12234801 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:14467289-14467118 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:14570166-14570333 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 1-166 |
| Cow position: | chr25:17365460-17365300 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:20625134-20624973 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 1-166 |
| Cow position: | chr25:22575724-22575559 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 1-166 |
| Cow position: | chr25:23410460-23410625 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:27504387-27504216 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-166 |
| Cow position: | chr25:29312546-29312379 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 39, 127 |
| Conread position: | 1-166 |
| Cow position: | chr25:33691350-33691517 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 1-166 |
| Cow position: | chr25:36026804-36026970 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 1-166 |
| Cow position: | chr25:40957190-40957026 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-171 |
| Cow position: | chr25:16007586-16007761 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-171 |
| Cow position: | chr25:24405939-24405769 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-175 |
| Cow position: | chr25:16001723-16001554 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-175 |
| Cow position: | chr25:35347701-35347879 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 1-176 |
| Cow position: | chr25:12239351-12239176 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-273 |
| Cow position: | chr25:25961761-25962052 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 2-147 |
| Cow position: | chr25:8576491-8576634 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-166 |
| Cow position: | chr25:10012251-10012084 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 2-166 |
| Cow position: | chr25:33245731-33245882 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 4-165 |
| Cow position: | chr25:24136636-24136479 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 9-174 |
| Cow position: | chr25:5972270-5972436 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 125 |
| Conread position: | 13-160 |
| Cow position: | chr25:8560676-8560819 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 13-165 |
| Cow position: | chr25:395163-395313 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 14-165 |
| Cow position: | chr25:18161102-18161246 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 18-161 |
| Cow position: | chr25:18905695-18905842 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 19-166 |
| Cow position: | chr25:11989703-11989546 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 23-166 |
| Cow position: | chr25:26457865-26457719 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 23-176 |
| Cow position: | chr25:13333242-13333397 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 24-172 |
| Cow position: | chr25:32606506-32606353 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 36-189 |
| Cow position: | chr25:33411090-33411250 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 55 |
| Conread position: | 40-166 |
| Cow position: | chr25:33142070-33141948 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 62-166 |
| Cow position: | chr25:33112110-33112007 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 63-166 |
| Cow position: | chr25:16691522-16691625 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.