Cow genome map

Conread name: Ovi2-UMC-peov3-004-f11

Conread position: 1-138
Cow position: chr8:42889325-42889189 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 118
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 1-148
Cow position: chr8:54572453-54572601 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 114

Conread position: 1-160
Cow position: chr8:34287736-34287892 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 89

Conread position: 1-160
Cow position: chr8:45690091-45689934 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 15

Conread position: 1-161
Cow position: chr8:11637929-11638100 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-161
Cow position: chr8:29028275-29028111 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 43, 0

Conread position: 1-161
Cow position: chr8:47484109-47483952 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 58

Conread position: 1-162
Cow position: chr8:4161217-4161056 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 136
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 119

Conread position: 1-162
Cow position: chr8:32984298-32984134 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 63

Conread position: 1-163
Cow position: chr8:8010713-8010870 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 1-163
Cow position: chr8:20131634-20131801 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 140
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 1-163
Cow position: chr8:49265499-49265335 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 63

Conread position: 1-164
Cow position: chr8:9811603-9811770 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 47

Conread position: 1-164
Cow position: chr8:16023834-16023670 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 89

Conread position: 1-164
Cow position: chr8:20311347-20311498 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-164
Cow position: chr8:22103372-22103210 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 123

Conread position: 1-164
Cow position: chr8:36364238-36364082 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1-164
Cow position: chr8:39936312-39936483 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-164
Cow position: chr8:42139235-42139075 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 1-165
Cow position: chr8:8134698-8134529 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 1-165
Cow position: chr8:8902160-8901997 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 124

Conread position: 1-165
Cow position: chr8:20836937-20837098 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 55

Conread position: 1-165
Cow position: chr8:24546342-24546498 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 1-165
Cow position: chr8:31313707-31313868 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 47, 118

Conread position: 1-165
Cow position: chr8:33286980-33287134 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-165
Cow position: chr8:35436805-35436641 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr8:38248886-38248723 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 103

Conread position: 1-165
Cow position: chr8:39808371-39808533 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 35

Conread position: 1-165
Cow position: chr8:51905235-51905069 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 94

Conread position: 1-165
Cow position: chr8:51959594-51959428 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 1-166
Cow position: chr8:6233088-6232924 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 1-166
Cow position: chr8:6431293-6431458 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 113

Conread position: 1-166
Cow position: chr8:12538787-12538637 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-166
Cow position: chr8:13975703-13975866 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 114

Conread position: 1-166
Cow position: chr8:18220916-18220754 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 135

Conread position: 1-166
Cow position: chr8:20683782-20683944 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 15

Conread position: 1-166
Cow position: chr8:26922448-26922594 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 1-166
Cow position: chr8:30135726-30135894 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 62

Conread position: 1-166
Cow position: chr8:31690611-31690780 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-166
Cow position: chr8:32079876-32079720 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 13

Conread position: 1-166
Cow position: chr8:34410261-34410423 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 90

Conread position: 1-166
Cow position: chr8:41264116-41264280 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 138
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 149, 108

Conread position: 1-166
Cow position: chr8:42575504-42575671 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-166
Cow position: chr8:44703899-44704061 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 26

Conread position: 1-166
Cow position: chr8:60320333-60320493 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 1-167
Cow position: chr8:28221758-28221589 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 145
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 117

Conread position: 1-169
Cow position: chr8:48763370-48763533 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 1-169
Cow position: chr8:53642613-53642442 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 113

Conread position: 1-170
Cow position: chr8:24909423-24909583 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 166, 61

Conread position: 1-172
Cow position: chr8:25572862-25573033 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-173
Cow position: chr8:55304885-55305060 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 114

Conread position: 1-174
Cow position: chr8:29947341-29947178 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 1-175
Cow position: chr8:3704432-3704604 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 66

Conread position: 1-175
Cow position: chr8:35990856-35991033 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 89

Conread position: 1-175
Cow position: chr8:58385478-58385654 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 108, 6

Conread position: 1-177
Cow position: chr8:32491365-32491540 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 167, 0

Conread position: 1-177
Cow position: chr8:36505177-36505362 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 1-191
Cow position: chr8:40033007-40032813 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 122

Conread position: 1-192
Cow position: chr8:19642280-19642470 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 112

Conread position: 1-207
Cow position: chr8:42578267-42578063 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 16

Conread position: 1-273
Cow position: chr8:24933961-24934240 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 25

Conread position: 1-273
Cow position: chr8:31317349-31317635 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 1-277
Cow position: chr8:9962762-9962471 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 2-118
Cow position: chr8:37008102-37007987 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 2-161
Cow position: chr8:47295787-47295950 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 2-164
Cow position: chr8:1107381-1107220 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 88

Conread position: 2-166
Cow position: chr8:1834732-1834896 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 111

Conread position: 2-166
Cow position: chr8:37147930-37148095 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 88

Conread position: 2-166
Cow position: chr8:40549796-40549639 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 2-166
Cow position: chr8:43904592-43904757 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 133

Conread position: 2-166
Cow position: chr8:50953375-50953537 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 2-167
Cow position: chr8:38893820-38893983 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 94

Conread position: 2-193
Cow position: chr8:11590739-11590927 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 111

Conread position: 3-166
Cow position: chr8:1841081-1840917 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 122

Conread position: 3-166
Cow position: chr8:25871536-25871700 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 56

Conread position: 3-166
Cow position: chr8:44664771-44664603 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 3-167
Cow position: chr8:3433687-3433852 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 41, 115

Conread position: 3-172
Cow position: chr8:7599515-7599671 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 3-172
Cow position: chr8:11896029-11896190 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 91

Conread position: 3-177
Cow position: chr8:52195731-52195904 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 3-197
Cow position: chr8:44437580-44437772 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 53

Conread position: 3-248
Cow position: chr8:29416523-29416276 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 94

Conread position: 4-145
Cow position: chr8:52863624-52863764 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 117

Conread position: 5-189
Cow position: chr8:20682216-20682395 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 162, 41

Conread position: 6-166
Cow position: chr8:24237570-24237723 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 7-158
Cow position: chr8:39845440-39845585 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 7-175
Cow position: chr8:3147733-3147560 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 56

Conread position: 9-161
Cow position: chr8:35519845-35519998 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 105

Conread position: 10-164
Cow position: chr8:61123485-61123332 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 80

Conread position: 19-166
Cow position: chr8:29935748-29935888 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 21-163
Cow position: chr8:13738326-13738471 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 21-165
Cow position: chr8:59507248-59507106 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 13

Conread position: 21-169
Cow position: chr8:20783435-20783286 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 92

Conread position: 33-166
Cow position: chr8:60170486-60170617 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 35-166
Cow position: chr8:58334391-58334520 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 35-169
Cow position: chr8:29390548-29390680 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 27

Conread position: 39-166
Cow position: chr8:19512615-19512490 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 40-169
Cow position: chr8:49300746-49300617 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 44-156
Cow position: chr8:15453482-15453594 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 46-165
Cow position: chr8:27053743-27053626 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 82

Conread position: 64-168
Cow position: chr8:31815173-31815070 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 80-166
Cow position: chr8:942700-942786 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.