Cow genome map
| Conread name: | Pey1-37G11 |
| Conread position: | 8-468 |
| Cow position: | chr14:433943-434406 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 9-388 |
| Cow position: | chr14:3128056-3127674 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 11-422 |
| Cow position: | chr14:25895418-25895832 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 11-434 |
| Cow position: | chr14:3061521-3061095 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 183, 166 |
| Conread position: | 11-446 |
| Cow position: | chr14:680359-680797 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 12-447 |
| Cow position: | chr14:680696-681134 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 12-460 |
| Cow position: | chr14:680444-680894 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 96 |
| Conread position: | 13-265 |
| Cow position: | chr14:25860498-25860753 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 13-276 |
| Cow position: | chr14:3127548-3127282 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 167, 162 |
| Conread position: | 13-372 |
| Cow position: | chr14:3061015-3060653 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 160, 172 |
| Conread position: | 13-373 |
| Cow position: | chr14:3156120-3156483 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 152, 143 |
| Conread position: | 13-446 |
| Cow position: | chr14:3080624-3080188 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 0 |
| Conread position: | 13-450 |
| Cow position: | chr14:3128136-3127697 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 437 |
| Conread position: | 13-454 |
| Cow position: | chr14:3080708-3080264 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 13-454 |
| Cow position: | chr14:3127968-3127524 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 77 |
| Conread position: | 13-460 |
| Cow position: | chr14:3061435-3060986 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 13-484 |
| Cow position: | chr14:447727-448198 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 13-515 |
| Cow position: | chr14:3080120-3079613 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 14-219 |
| Cow position: | chr14:3155632-3155837 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 159, 169 |
| Conread position: | 14-420 |
| Cow position: | chr14:25895001-25895410 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 14-449 |
| Cow position: | chr14:3061098-3060660 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 158 |
| Conread position: | 14-454 |
| Cow position: | chr14:3080371-3079928 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 171 |
| Conread position: | 14-454 |
| Cow position: | chr14:3100866-3100423 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 14-460 |
| Cow position: | chr14:3080791-3080343 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 326 |
| Conread position: | 14-460 |
| Cow position: | chr14:3127799-3127351 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 218, 445 |
| Conread position: | 14-467 |
| Cow position: | chr14:3127883-3127427 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 14-484 |
| Cow position: | chr14:3061182-3060712 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 15-384 |
| Cow position: | chr14:3155465-3155837 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 15-445 |
| Cow position: | chr14:3061601-3061168 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 165 |
| Conread position: | 15-454 |
| Cow position: | chr14:680783-681225 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 15-460 |
| Cow position: | chr14:3127714-3127266 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 18-446 |
| Cow position: | chr14:447816-448247 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 155 |
| Conread position: | 20-444 |
| Cow position: | chr14:447650-448077 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 169 |
| Conread position: | 21-446 |
| Cow position: | chr14:447567-447995 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 21-471 |
| Cow position: | chr14:3080280-3079828 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 156 |
| Conread position: | 21-488 |
| Cow position: | chr14:433872-434342 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 66 |
| Conread position: | 22-417 |
| Cow position: | chr14:3061678-3061280 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 209, 238 |
| Conread position: | 22-454 |
| Cow position: | chr14:3080195-3079760 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 155 |
| Conread position: | 22-454 |
| Cow position: | chr14:3080867-3080432 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 22-485 |
| Cow position: | chr14:3061258-3060794 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 23-364 |
| Cow position: | chr14:447905-448249 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 167, 154 |
| Conread position: | 23-388 |
| Cow position: | chr14:25836783-25837151 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 23-472 |
| Cow position: | chr14:25895682-25896133 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 24-333 |
| Cow position: | chr14:663422-663110 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 133 |
| Conread position: | 24-334 |
| Cow position: | chr14:25836196-25836509 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 24-334 |
| Cow position: | chr14:25895851-25896164 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 24-389 |
| Cow position: | chr14:25877392-25877760 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 24-416 |
| Cow position: | chr14:25895599-25895994 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 24-446 |
| Cow position: | chr14:25895179-25895604 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 158 |
| Conread position: | 24-446 |
| Cow position: | chr14:25895347-25895772 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 24-448 |
| Cow position: | chr14:25895095-25895522 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 146 |
| Conread position: | 24-454 |
| Cow position: | chr14:3156047-3156480 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 24-460 |
| Cow position: | chr14:25895515-25895953 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 33-406 |
| Cow position: | chr14:25894937-25895312 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 35-334 |
| Cow position: | chr14:25877487-25877789 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 35-379 |
| Cow position: | chr14:25860436-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 35-388 |
| Cow position: | chr14:25876563-25876919 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 196, 304 |
| Conread position: | 38-446 |
| Cow position: | chr14:3155405-3155815 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 196, 9 |
| Conread position: | 39-443 |
| Cow position: | chr14:680220-680626 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 194, 16 |
| Conread position: | 41-429 |
| Cow position: | chr14:663488-663098 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 14 |
| Conread position: | 42-421 |
| Cow position: | chr14:3061742-3061360 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 150, 144 |
| Conread position: | 42-471 |
| Cow position: | chr14:433812-434240 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 13 |
| Conread position: | 51-454 |
| Cow position: | chr14:25877167-25877573 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 67-389 |
| Cow position: | chr14:25836575-25836900 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 67-394 |
| Cow position: | chr14:25860300-25860630 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 67-394 |
| Cow position: | chr14:25877351-25877681 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 67-406 |
| Cow position: | chr14:25836155-25836497 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 73-481 |
| Cow position: | chr14:3128160-3127752 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 100, 112 |
| Conread position: | 75-429 |
| Cow position: | chr14:25860392-25860749 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 97-458 |
| Cow position: | chr14:447559-447923 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 135, 264 |
| Conread position: | 108-446 |
| Cow position: | chr14:433791-434132 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 116-460 |
| Cow position: | chr14:25894935-25895281 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 119-435 |
| Cow position: | chr14:25876563-25876883 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 125-446 |
| Cow position: | chr14:3061743-3061419 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 109, 235 |
| Conread position: | 126-454 |
| Cow position: | chr14:680222-680553 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 126-454 |
| Cow position: | chr14:3155408-3155739 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 133-481 |
| Cow position: | chr14:663480-663133 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 6 |
| Conread position: | 134-454 |
| Cow position: | chr14:447512-447835 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 48 |
| Conread position: | 234-454 |
| Cow position: | chr14:3128164-3127944 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.