Cow genome map

Conread name: Pey1-37G11

Conread position: 1-433
Cow position: chr18:54668820-54668382 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 276
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 95

Conread position: 2-350
Cow position: chr18:22844070-22843716 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 167, 181

Conread position: 6-416
Cow position: chr18:44817786-44818202 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 258
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 179

Conread position: 7-471
Cow position: chr18:22844236-22843769 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 279
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 130, 176

Conread position: 8-385
Cow position: chr18:53610165-53609785 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 242
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 64

Conread position: 8-470
Cow position: chr18:22844319-22843851 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 294
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 88

Conread position: 9-405
Cow position: chr18:55497655-55497256 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 86

Conread position: 10-362
Cow position: chr18:56267492-56267137 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 221, 0

Conread position: 12-406
Cow position: chr18:50059569-50059172 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 245
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 162, 144

Conread position: 12-454
Cow position: chr18:52012221-52011776 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 411

Conread position: 13-224
Cow position: chr18:50848894-50849105 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 37

Conread position: 13-289
Cow position: chr18:55497315-55497036 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 169, 161

Conread position: 13-386
Cow position: chr18:56316692-56317068 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 35

Conread position: 13-443
Cow position: chr18:53610412-53609979 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 176, 158

Conread position: 13-446
Cow position: chr18:49032991-49032555 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 273
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 88

Conread position: 13-446
Cow position: chr18:53635653-53635217 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 13-446
Cow position: chr18:56128512-56128948 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 86

Conread position: 13-447
Cow position: chr18:42724449-42724012 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 283
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 86

Conread position: 13-447
Cow position: chr18:53635485-53635048 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 270
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 82

Conread position: 13-454
Cow position: chr18:55497483-55497039 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 82

Conread position: 13-454
Cow position: chr18:56128260-56128704 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 285
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 181, 167

Conread position: 13-454
Cow position: chr18:56128680-56129124 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 274
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 35

Conread position: 13-454
Cow position: chr18:56329376-56328932 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 86

Conread position: 13-460
Cow position: chr18:53635905-53635456 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 292
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 82

Conread position: 13-481
Cow position: chr18:56316440-56316908 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 35

Conread position: 13-481
Cow position: chr18:56316524-56316992 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 35

Conread position: 13-495
Cow position: chr18:56391376-56390890 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 82

Conread position: 14-298
Cow position: chr18:56267404-56267117 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 34

Conread position: 14-388
Cow position: chr18:49033074-49032697 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 161, 176

Conread position: 14-454
Cow position: chr18:56329291-56328848 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 34

Conread position: 14-454
Cow position: chr18:56329711-56329268 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 293
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 34

Conread position: 15-385
Cow position: chr18:56391206-56390833 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 177, 162

Conread position: 15-387
Cow position: chr18:52011966-52011591 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 217, 0

Conread position: 15-388
Cow position: chr18:50246134-50246510 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 174, 141

Conread position: 15-389
Cow position: chr18:53610242-53609865 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 83, 74

Conread position: 15-392
Cow position: chr18:49032485-49032106 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 236
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 33

Conread position: 15-434
Cow position: chr18:52012134-52011712 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 74

Conread position: 15-446
Cow position: chr18:50848560-50848994 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 267
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 33

Conread position: 15-446
Cow position: chr18:53610326-53609892 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 281
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 85, 79

Conread position: 15-446
Cow position: chr18:56391290-56390856 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 160

Conread position: 15-447
Cow position: chr18:49033157-49032722 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 15-450
Cow position: chr18:56330046-56329608 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 15-454
Cow position: chr18:52012386-52011944 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 287
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 33

Conread position: 15-454
Cow position: chr18:56329458-56329016 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 168

Conread position: 15-454
Cow position: chr18:56329794-56329352 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 15-470
Cow position: chr18:56316274-56316732 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 286
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 84

Conread position: 15-471
Cow position: chr18:50281647-50282105 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 272
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 94

Conread position: 16-447
Cow position: chr18:49033240-49032806 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 283
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 78, 85

Conread position: 16-471
Cow position: chr18:56329877-56329420 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 167

Conread position: 19-417
Cow position: chr18:42724527-42724126 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 156, 164

Conread position: 21-413
Cow position: chr18:44817888-44818285 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 170, 149

Conread position: 22-407
Cow position: chr18:56128185-56128573 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 243
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 67

Conread position: 22-433
Cow position: chr18:47846705-47846291 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 100

Conread position: 22-447
Cow position: chr18:53586767-53586339 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 257
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 28

Conread position: 22-454
Cow position: chr18:56329619-56329184 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 161

Conread position: 22-471
Cow position: chr18:49032814-49032363 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 282
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 26

Conread position: 22-471
Cow position: chr18:56391535-56391084 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 241

Conread position: 23-287
Cow position: chr18:56391921-56391654 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 208, 0

Conread position: 23-319
Cow position: chr18:55442331-55442630 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 161, 147

Conread position: 23-335
Cow position: chr18:44818536-44818850 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 202
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 32

Conread position: 23-450
Cow position: chr18:56316198-56316628 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 67, 78

Conread position: 23-454
Cow position: chr18:56316114-56316548 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 281
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 25

Conread position: 23-472
Cow position: chr18:50281907-50282358 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 282
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 208, 246

Conread position: 24-373
Cow position: chr18:55497388-55497036 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 28

Conread position: 24-380
Cow position: chr18:42724270-42723909 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 31

Conread position: 24-446
Cow position: chr18:49033316-49032891 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 271
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 16, 24

Conread position: 24-449
Cow position: chr18:42724354-42723926 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 268
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 48

Conread position: 24-450
Cow position: chr18:49032644-49032215 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 276
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 16, 28

Conread position: 24-454
Cow position: chr18:50848737-50849170 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 268
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 24

Conread position: 34-334
Cow position: chr18:53610055-53609752 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 14

Conread position: 34-387
Cow position: chr18:53635380-53635025 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 14

Conread position: 35-385
Cow position: chr18:52012282-52011929 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 196, 0

Conread position: 36-446
Cow position: chr18:42724594-42724181 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 36-446
Cow position: chr18:54668869-54668456 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 259
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 49

Conread position: 36-454
Cow position: chr18:55067116-55066695 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 255
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 53

Conread position: 48-294
Cow position: chr18:54670262-54670009 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 242

Conread position: 49-491
Cow position: chr18:47846594-47846149 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 282
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 50

Conread position: 50-429
Cow position: chr18:53610459-53610077 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 22

Conread position: 50-460
Cow position: chr18:53636036-53635624 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 252
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 182, 409

Conread position: 50-460
Cow position: chr18:56128129-56128541 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 260
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 182, 300

Conread position: 50-471
Cow position: chr18:22844361-22843935 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 260
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 123, 130

Conread position: 51-470
Cow position: chr18:56391590-56391168 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 64

Conread position: 53-387
Cow position: chr18:55497695-55497358 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 120

Conread position: 59-454
Cow position: chr18:56267527-56267129 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 118, 110

Conread position: 68-400
Cow position: chr18:56391960-56391628 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 163, 308

Conread position: 106-454
Cow position: chr18:55442330-55442681 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 224
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 76

Conread position: 106-470
Cow position: chr18:56316113-56316480 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 232
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 149

Conread position: 108-454
Cow position: chr18:49033316-49032967 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 84, 76

Conread position: 117-454
Cow position: chr18:56316040-56316380 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 212
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 115, 234

Conread position: 118-471
Cow position: chr18:55497714-55497359 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 240

Conread position: 120-454
Cow position: chr18:42724594-42724257 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 57

Conread position: 120-454
Cow position: chr18:56128115-56128452 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 120-460
Cow position: chr18:53610473-53610131 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 220
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 36

Conread position: 122-423
Cow position: chr18:44817819-44818125 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 60

Conread position: 129-427
Cow position: chr18:22844366-22844062 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 291

Conread position: 153-518
Cow position: chr18:56391959-56391591 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 24

Conread position: 196-460
Cow position: chr18:56316035-56316301 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 263

Conread position: 203-493
Cow position: chr18:55497713-55497422 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 130

Conread position: 204-483
Cow position: chr18:42724594-42724313 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 255

Show alignments to all cow chromosomes.