Cow genome map

Conread name: Pey1-37G11

Conread position: 1-444
Cow position: chr25:24385208-24384762 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 288
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 47

Conread position: 7-385
Cow position: chr25:4657419-4657038 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 88

Conread position: 8-263
Cow position: chr25:33529229-33529487 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 155, 148

Conread position: 8-433
Cow position: chr25:24385285-24384857 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 78

Conread position: 8-454
Cow position: chr25:34762959-34763406 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 11-292
Cow position: chr25:3636260-3635976 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 224, 0

Conread position: 11-332
Cow position: chr25:3636344-3636020 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 223, 0

Conread position: 11-375
Cow position: chr25:3664233-3664600 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 11-406
Cow position: chr25:24398937-24398542 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 97, 84

Conread position: 11-464
Cow position: chr25:25652574-25653030 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 11-470
Cow position: chr25:25652742-25653204 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 84

Conread position: 12-214
Cow position: chr25:427380-427582 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-454
Cow position: chr25:33157422-33156977 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 12-460
Cow position: chr25:34762880-34763327 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 280
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 28, 36

Conread position: 12-460
Cow position: chr25:34763213-34763660 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 288
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 178, 173

Conread position: 13-319
Cow position: chr25:34733957-34733649 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 219, 275

Conread position: 13-335
Cow position: chr25:33529150-33529475 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 205
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 218, 273

Conread position: 13-386
Cow position: chr25:25652996-25653372 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 80

Conread position: 13-386
Cow position: chr25:34473727-34474100 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 135

Conread position: 13-388
Cow position: chr25:33157337-33156959 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 35

Conread position: 13-388
Cow position: chr25:33298867-33299245 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 241
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 79, 86

Conread position: 13-454
Cow position: chr25:3664067-3664511 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 77

Conread position: 13-454
Cow position: chr25:33144901-33145342 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 270
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 35

Conread position: 13-469
Cow position: chr25:33298531-33298989 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 270
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 177, 166

Conread position: 13-471
Cow position: chr25:25652492-25652952 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 446

Conread position: 13-523
Cow position: chr25:33530365-33530884 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 14-384
Cow position: chr25:36844567-36844203 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 232
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 103

Conread position: 14-385
Cow position: chr25:33157168-33156794 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 34

Conread position: 14-388
Cow position: chr25:34769987-34769610 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 233
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 34

Conread position: 14-442
Cow position: chr25:33298700-33299131 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 266
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 151, 142

Conread position: 14-444
Cow position: chr25:24398850-24398420 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 263
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 180, 65

Conread position: 14-450
Cow position: chr25:34763299-34763734 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 159

Conread position: 15-251
Cow position: chr25:22236051-22236290 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 33

Conread position: 15-435
Cow position: chr25:25652830-25653253 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 15-454
Cow position: chr25:33299121-33299563 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 261
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 84

Conread position: 15-461
Cow position: chr25:3664153-3664601 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 168

Conread position: 19-427
Cow position: chr25:24385358-24384947 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 82

Conread position: 19-470
Cow position: chr25:33530119-33530573 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 440

Conread position: 21-442
Cow position: chr25:33529074-33529498 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 21-494
Cow position: chr25:34473651-34474124 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-418
Cow position: chr25:24385103-24384704 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 247
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 51

Conread position: 22-470
Cow position: chr25:25652333-25652784 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 148

Conread position: 23-296
Cow position: chr25:33127948-33128224 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 25

Conread position: 23-335
Cow position: chr25:33506810-33507125 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 161

Conread position: 23-454
Cow position: chr25:25652250-25652684 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 23-470
Cow position: chr25:3663993-3664443 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 436

Conread position: 23-484
Cow position: chr25:25652922-25653386 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 154

Conread position: 24-265
Cow position: chr25:427308-427552 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 209, 0

Conread position: 24-290
Cow position: chr25:3676139-3676408 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 208, 236

Conread position: 24-300
Cow position: chr25:23267272-23266993 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 57

Conread position: 24-326
Cow position: chr25:22940453-22940148 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 50

Conread position: 24-371
Cow position: chr25:3676055-3676405 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 63

Conread position: 24-404
Cow position: chr25:22235976-22236358 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 166, 159

Conread position: 24-416
Cow position: chr25:3636415-3636020 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 24-435
Cow position: chr25:22235892-22236306 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 265
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 66

Conread position: 24-444
Cow position: chr25:3636499-3636076 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 24-454
Cow position: chr25:33298626-33299059 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 264
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 336

Conread position: 24-460
Cow position: chr25:34473570-34474005 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 294

Conread position: 24-466
Cow position: chr25:25652419-25652864 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 32-332
Cow position: chr25:34734023-34733719 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 60

Conread position: 34-379
Cow position: chr25:22940527-22940179 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 55

Conread position: 36-326
Cow position: chr25:326488-326783 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 28

Conread position: 41-460
Cow position: chr25:3663927-3664348 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 418

Conread position: 41-473
Cow position: chr25:33530057-33530489 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 418

Conread position: 43-498
Cow position: chr25:33506746-33507205 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 48-488
Cow position: chr25:3636559-3636116 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 136

Conread position: 50-446
Cow position: chr25:4657460-4657061 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 48

Conread position: 50-470
Cow position: chr25:25652193-25652616 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 409

Conread position: 53-450
Cow position: chr25:33298991-33299391 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 242
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 36

Conread position: 54-470
Cow position: chr25:34762840-34763254 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 263
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 19

Conread position: 57-495
Cow position: chr25:24399215-24398788 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 275
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 126

Conread position: 59-446
Cow position: chr25:33529028-33529418 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 60-437
Cow position: chr25:414681-414304 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 238
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 130, 117

Conread position: 60-484
Cow position: chr25:3676007-3676429 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 379

Conread position: 69-406
Cow position: chr25:34732584-34732244 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 102-454
Cow position: chr25:33157581-33157229 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 225
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 11

Conread position: 108-384
Cow position: chr25:23267272-23266993 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 56

Conread position: 109-459
Cow position: chr25:36844556-36844213 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 217
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 201

Conread position: 113-444
Cow position: chr25:33506732-33507066 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 116-454
Cow position: chr25:3663918-3664259 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 116-454
Cow position: chr25:34734023-34733681 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 54

Conread position: 117-458
Cow position: chr25:427233-427577 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 211
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 18

Conread position: 119-472
Cow position: chr25:33127792-33128146 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 290

Conread position: 120-388
Cow position: chr25:326486-326759 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 234

Conread position: 123-398
Cow position: chr25:36844626-36844348 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 174
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 128-471
Cow position: chr25:22235828-22236173 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 217
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 49

Conread position: 129-433
Cow position: chr25:3675992-3676299 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 46

Conread position: 129-446
Cow position: chr25:25652188-25652508 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 131-488
Cow position: chr25:4657463-4657103 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 42, 49

Conread position: 143-429
Cow position: chr25:24385402-24385113 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 14

Conread position: 192-394
Cow position: chr25:23267272-23267067 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 56

Conread position: 195-471
Cow position: chr25:33506730-33507008 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 264

Conread position: 199-446
Cow position: chr25:22940530-22940280 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 95

Conread position: 209-470
Cow position: chr25:25652184-25652448 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 250

Conread position: 210-470
Cow position: chr25:3663928-3664191 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 25, 249

Conread position: 230-470
Cow position: chr25:326517-326756 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 226, 0

Conread position: 231-484
Cow position: chr25:34473528-34473778 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 225, 0

Conread position: 270-470
Cow position: chr25:25652164-25652364 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 190, 186

Show alignments to all cow chromosomes.