Cow genome map
| Conread name: | Pig1-100P14 |
| Conread position: | 93-395 |
| Cow position: | chr11:54484539-54484846 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 97-384 |
| Cow position: | chr11:44582465-44582757 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 98-265 |
| Cow position: | chr11:23880898-23880725 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 98-267 |
| Cow position: | chr11:66729964-66729789 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 98-297 |
| Cow position: | chr11:29613125-29613329 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 98-320 |
| Cow position: | chr11:28064961-28064736 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 98-329 |
| Cow position: | chr11:39804607-39804371 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 98-388 |
| Cow position: | chr11:28053746-28054037 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 98-389 |
| Cow position: | chr11:10848319-10848024 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 98-390 |
| Cow position: | chr11:49558807-49559097 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 205 |
| Conread position: | 98-394 |
| Cow position: | chr11:9156279-9156589 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 98-394 |
| Cow position: | chr11:44517996-44518298 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 98-394 |
| Cow position: | chr11:47759409-47759715 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 98-394 |
| Cow position: | chr11:67451363-67451063 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 98-395 |
| Cow position: | chr11:12357545-12357849 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 98-395 |
| Cow position: | chr11:24394182-24393883 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 98-395 |
| Cow position: | chr11:36763614-36763317 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 61 |
| Conread position: | 98-396 |
| Cow position: | chr11:31927033-31926737 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 101-367 |
| Cow position: | chr11:7110242-7110516 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 101-392 |
| Cow position: | chr11:22935958-22935664 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 101-394 |
| Cow position: | chr11:31861767-31861469 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 101-395 |
| Cow position: | chr11:38834570-38834868 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 113-395 |
| Cow position: | chr11:30122986-30123278 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 113-395 |
| Cow position: | chr11:44156393-44156680 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 114-380 |
| Cow position: | chr11:4034493-4034767 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 114-380 |
| Cow position: | chr11:20733383-20733659 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 114-394 |
| Cow position: | chr11:3493846-3493563 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 114-394 |
| Cow position: | chr11:19063219-19063504 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 114-394 |
| Cow position: | chr11:28228913-28229187 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 114-395 |
| Cow position: | chr11:19101642-19101928 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 116-290 |
| Cow position: | chr11:81851858-81852038 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 120-395 |
| Cow position: | chr11:1495246-1495521 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 122-300 |
| Cow position: | chr11:13065121-13065304 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 124-388 |
| Cow position: | chr11:26564249-26564511 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 124-394 |
| Cow position: | chr11:5342077-5342353 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 124-395 |
| Cow position: | chr11:29232176-29232442 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 132-394 |
| Cow position: | chr11:12094399-12094136 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 136-378 |
| Cow position: | chr11:4063040-4063283 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 139-392 |
| Cow position: | chr11:80473443-80473697 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 142-395 |
| Cow position: | chr11:50027055-50027308 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 145-388 |
| Cow position: | chr11:85392997-85393240 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 156-394 |
| Cow position: | chr11:15984444-15984194 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 159-337 |
| Cow position: | chr11:42311639-42311818 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 171-395 |
| Cow position: | chr11:75554196-75554412 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 38 |
Show alignments to all cow chromosomes.