Cow genome map
| Conread name: | Pig1-100P14 |
| Conread position: | 85-394 |
| Cow position: | chr15:17217434-17217746 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 93-393 |
| Cow position: | chr15:6591796-6592104 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 94-392 |
| Cow position: | chr15:36625452-36625756 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 95-281 |
| Cow position: | chr15:1299742-1299936 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 128 |
| Conread position: | 98-315 |
| Cow position: | chr15:36392328-36392548 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 98-329 |
| Cow position: | chr15:3840812-3841059 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 244 |
| Conread position: | 98-336 |
| Cow position: | chr15:40107844-40107612 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 98-367 |
| Cow position: | chr15:6386530-6386803 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 98-373 |
| Cow position: | chr15:6553008-6553293 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 98-376 |
| Cow position: | chr15:53409727-53409448 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 98-391 |
| Cow position: | chr15:4922959-4922664 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 98-393 |
| Cow position: | chr15:13391252-13391554 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 98-394 |
| Cow position: | chr15:2926122-2925825 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 98-394 |
| Cow position: | chr15:3009029-3009340 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 98-394 |
| Cow position: | chr15:3889705-3889391 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 248 |
| Conread position: | 98-394 |
| Cow position: | chr15:18267164-18267474 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 98-394 |
| Cow position: | chr15:32712038-32711738 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 98-395 |
| Cow position: | chr15:4813414-4813111 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 27, 236 |
| Conread position: | 98-395 |
| Cow position: | chr15:7838075-7837762 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 98-395 |
| Cow position: | chr15:8100282-8099983 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 98-395 |
| Cow position: | chr15:15346299-15346602 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 98-395 |
| Cow position: | chr15:16595643-16595342 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 5, 116 |
| Conread position: | 98-395 |
| Cow position: | chr15:18577526-18577223 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 98-395 |
| Cow position: | chr15:35646863-35647155 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 98-395 |
| Cow position: | chr15:35752505-35752806 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 98-395 |
| Cow position: | chr15:51218412-51218116 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 98-395 |
| Cow position: | chr15:51675530-51675229 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 98-396 |
| Cow position: | chr15:6079566-6079265 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 98-397 |
| Cow position: | chr15:7892728-7893009 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 100-392 |
| Cow position: | chr15:36668561-36668262 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 100-395 |
| Cow position: | chr15:5981161-5980860 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 100-395 |
| Cow position: | chr15:6155132-6155431 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 101-362 |
| Cow position: | chr15:1765113-1764864 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 107-240 |
| Cow position: | chr15:6368002-6368140 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 107-379 |
| Cow position: | chr15:4652165-4651880 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 108-393 |
| Cow position: | chr15:35736596-35736303 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 112-393 |
| Cow position: | chr15:2214098-2214380 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 113-389 |
| Cow position: | chr15:9430738-9430458 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 226 |
| Conread position: | 113-393 |
| Cow position: | chr15:17148921-17148642 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 114-380 |
| Cow position: | chr15:6471130-6471403 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 114-388 |
| Cow position: | chr15:814776-815055 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 114-395 |
| Cow position: | chr15:2077456-2077170 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 114-395 |
| Cow position: | chr15:4386553-4386272 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 114-395 |
| Cow position: | chr15:7545662-7545376 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 115-410 |
| Cow position: | chr15:1833652-1833954 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 116-396 |
| Cow position: | chr15:21450475-21450174 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 44, 240 |
| Conread position: | 122-394 |
| Cow position: | chr15:9913487-9913206 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 124-311 |
| Cow position: | chr15:4915978-4915790 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 124-312 |
| Cow position: | chr15:17684560-17684750 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 124-388 |
| Cow position: | chr15:31359666-31359399 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 136-380 |
| Cow position: | chr15:17079425-17079683 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 162-394 |
| Cow position: | chr15:1668459-1668238 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 171-395 |
| Cow position: | chr15:9003390-9003609 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 217-395 |
| Cow position: | chr15:44829490-44829313 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 102, 109 |
Show alignments to all cow chromosomes.