Cow genome map
| Conread name: | Pig1-100P14 |
| Conread position: | 58-385 |
| Cow position: | chr17:14215944-14216284 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 42, 160 |
| Conread position: | 98-327 |
| Cow position: | chr17:2174850-2174618 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 98-380 |
| Cow position: | chr17:6120757-6120468 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 121 |
| Conread position: | 98-384 |
| Cow position: | chr17:15436823-15436543 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 98-394 |
| Cow position: | chr17:150843-151156 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 246 |
| Conread position: | 98-394 |
| Cow position: | chr17:3655252-3655552 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 98-394 |
| Cow position: | chr17:14040000-14040295 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 98-394 |
| Cow position: | chr17:20488984-20488678 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 120 |
| Conread position: | 98-395 |
| Cow position: | chr17:2580666-2580359 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 98-395 |
| Cow position: | chr17:4061139-4060837 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 98-395 |
| Cow position: | chr17:15324871-15324570 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 98-395 |
| Cow position: | chr17:19267785-19268088 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 100-394 |
| Cow position: | chr17:15372267-15371967 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 100-395 |
| Cow position: | chr17:20403471-20403163 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 287 |
| Conread position: | 102-389 |
| Cow position: | chr17:20086727-20087006 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 112-392 |
| Cow position: | chr17:17131163-17130883 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 114-385 |
| Cow position: | chr17:24783186-24782909 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 114-395 |
| Cow position: | chr17:6069579-6069295 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 114-395 |
| Cow position: | chr17:40805836-40805550 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 121-394 |
| Cow position: | chr17:239364-239085 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 122-379 |
| Cow position: | chr17:2031143-2030885 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 124-328 |
| Cow position: | chr17:16121528-16121736 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 124-385 |
| Cow position: | chr17:43989516-43989249 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 124-394 |
| Cow position: | chr17:23323432-23323711 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 124-394 |
| Cow position: | chr17:31767025-31767299 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 124-395 |
| Cow position: | chr17:54431-54713 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 128-315 |
| Cow position: | chr17:22133217-22133021 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 149-395 |
| Cow position: | chr17:1656864-1657112 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 177-395 |
| Cow position: | chr17:38874589-38874369 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 180-395 |
| Cow position: | chr17:42265915-42265707 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 212-395 |
| Cow position: | chr17:15156048-15156228 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 107, 57 |
Show alignments to all cow chromosomes.