Cow genome map

Conread name: Pig1-107L24

Conread position: 1-168
Cow position: chr1:102797804-102797978 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-327
Cow position: chr1:91023277-91023614 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 20

Conread position: 1-423
Cow position: chr1:76470847-76470400 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 140

Conread position: 1-530
Cow position: chr1:11729362-11728827 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 47

Conread position: 2-132
Cow position: chr1:73397881-73398017 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 2-175
Cow position: chr1:70044534-70044369 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 62

Conread position: 2-178
Cow position: chr1:15628469-15628292 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 155, 0

Conread position: 2-190
Cow position: chr1:11488968-11489163 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 8

Conread position: 2-209
Cow position: chr1:61011365-61011160 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 137, 55

Conread position: 2-315
Cow position: chr1:47790478-47790795 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 54, 117

Conread position: 2-331
Cow position: chr1:19970404-19970751 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 19

Conread position: 2-335
Cow position: chr1:18936647-18936984 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 91

Conread position: 2-336
Cow position: chr1:49433071-49433416 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 325

Conread position: 2-336
Cow position: chr1:66138512-66138165 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 145

Conread position: 2-336
Cow position: chr1:70435176-70434848 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 136, 63

Conread position: 2-345
Cow position: chr1:99642179-99642528 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 2-473
Cow position: chr1:68845316-68845789 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 64

Conread position: 2-544
Cow position: chr1:22824099-22823560 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 297

Conread position: 2-546
Cow position: chr1:69539875-69539315 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 71

Conread position: 3-108
Cow position: chr1:8778149-8778254 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr1:67743549-67743677 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 3-146
Cow position: chr1:43379172-43379320 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 3-147
Cow position: chr1:40284460-40284598 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 54

Conread position: 3-152
Cow position: chr1:41022605-41022455 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 3-156
Cow position: chr1:25956085-25955927 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 3-156
Cow position: chr1:89146683-89146842 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-157
Cow position: chr1:64421725-64421572 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 18

Conread position: 3-160
Cow position: chr1:22828384-22828542 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 3-161
Cow position: chr1:40077979-40077821 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 28

Conread position: 3-161
Cow position: chr1:84787449-84787297 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 29

Conread position: 3-161
Cow position: chr1:94712974-94713138 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 83

Conread position: 3-162
Cow position: chr1:7966036-7965872 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 3-165
Cow position: chr1:100513086-100512920 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 3-166
Cow position: chr1:60403958-60403788 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 3-167
Cow position: chr1:79178820-79178649 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 3-168
Cow position: chr1:92188148-92187977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 3-169
Cow position: chr1:32217427-32217261 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 127

Conread position: 3-169
Cow position: chr1:47966831-47967004 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 3-169
Cow position: chr1:62469247-62469080 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 3-169
Cow position: chr1:69411506-69411678 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 28

Conread position: 3-170
Cow position: chr1:731781-731955 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 13

Conread position: 3-170
Cow position: chr1:64458161-64457983 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 3-170
Cow position: chr1:69442326-69442500 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 3-170
Cow position: chr1:70416571-70416742 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 3-170
Cow position: chr1:77685789-77685963 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 3-173
Cow position: chr1:39683953-39684129 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 113

Conread position: 3-173
Cow position: chr1:40303737-40303566 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 3-173
Cow position: chr1:94823200-94823377 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 3-175
Cow position: chr1:84595080-84594901 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 3-176
Cow position: chr1:76518614-76518434 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 3-177
Cow position: chr1:20537391-20537216 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 3-177
Cow position: chr1:63994366-63994544 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 3-177
Cow position: chr1:70483146-70483323 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-177
Cow position: chr1:89437539-89437705 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 107

Conread position: 3-178
Cow position: chr1:25021889-25022065 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 3-178
Cow position: chr1:31340578-31340761 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 3-178
Cow position: chr1:43296525-43296710 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 168

Conread position: 3-178
Cow position: chr1:49297840-49297661 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 3-178
Cow position: chr1:58420387-58420213 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 3-178
Cow position: chr1:78029837-78030022 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 3-178
Cow position: chr1:78034716-78034895 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 73

Conread position: 3-178
Cow position: chr1:85622721-85622539 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-178
Cow position: chr1:87149627-87149805 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 3-178
Cow position: chr1:98556929-98557109 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 3-179
Cow position: chr1:15875848-15875669 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 3-179
Cow position: chr1:69532337-69532514 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 3-180
Cow position: chr1:54569890-54569706 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 3-181
Cow position: chr1:67674419-67674593 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 136, 72

Conread position: 3-181
Cow position: chr1:68710473-68710284 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-182
Cow position: chr1:78793814-78793997 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 3-183
Cow position: chr1:45099945-45099767 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 136, 73

Conread position: 3-186
Cow position: chr1:76739725-76739908 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 131, 35

Conread position: 3-187
Cow position: chr1:32014380-32014199 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 136, 62

Conread position: 3-188
Cow position: chr1:48618058-48618244 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 3-189
Cow position: chr1:73551313-73551511 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 3-190
Cow position: chr1:95156776-95156966 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 3-194
Cow position: chr1:93590401-93590592 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 13

Conread position: 3-195
Cow position: chr1:26895623-26895818 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 3-195
Cow position: chr1:41027261-41027068 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 154

Conread position: 3-195
Cow position: chr1:90904568-90904763 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 3-196
Cow position: chr1:97540828-97540627 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 3-198
Cow position: chr1:95153063-95152861 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 3-199
Cow position: chr1:759223-759429 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-199
Cow position: chr1:45315442-45315647 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 3-201
Cow position: chr1:6381965-6381759 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 114

Conread position: 3-201
Cow position: chr1:6790963-6790762 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 138

Conread position: 3-201
Cow position: chr1:79718997-79718797 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 98

Conread position: 3-201
Cow position: chr1:96558657-96558863 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 3-202
Cow position: chr1:51860375-51860575 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 3-202
Cow position: chr1:81391111-81390908 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 113

Conread position: 3-202
Cow position: chr1:97144282-97144478 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 64

Conread position: 3-203
Cow position: chr1:17056179-17055979 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 89

Conread position: 3-203
Cow position: chr1:20871367-20871574 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 3-203
Cow position: chr1:49980897-49980695 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 3-203
Cow position: chr1:63992144-63992351 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 7

Conread position: 3-203
Cow position: chr1:71789959-71790163 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 39

Conread position: 3-203
Cow position: chr1:73721553-73721345 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 93

Conread position: 3-203
Cow position: chr1:81481196-81481397 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 3-203
Cow position: chr1:90267913-90267706 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 180

Conread position: 3-203
Cow position: chr1:102468433-102468631 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 53, 13

Conread position: 3-204
Cow position: chr1:77739913-77739706 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 92

Conread position: 3-208
Cow position: chr1:242741-242537 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 137, 63

Conread position: 3-208
Cow position: chr1:97717387-97717592 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 136, 107

Conread position: 3-210
Cow position: chr1:5636883-5637081 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 55

Conread position: 3-210
Cow position: chr1:21093308-21093095 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 92

Conread position: 3-210
Cow position: chr1:38706664-38706876 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 17

Conread position: 3-210
Cow position: chr1:87095022-87095236 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 3-210
Cow position: chr1:95835606-95835820 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 3-211
Cow position: chr1:95618830-95618619 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 66, 92

Conread position: 3-212
Cow position: chr1:42152300-42152509 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 137, 49

Conread position: 3-212
Cow position: chr1:46245547-46245772 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 115

Conread position: 3-213
Cow position: chr1:5751504-5751288 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 3-214
Cow position: chr1:74751439-74751662 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 3-215
Cow position: chr1:17875524-17875733 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 3-216
Cow position: chr1:852362-852143 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 49, 209

Conread position: 3-216
Cow position: chr1:57089489-57089707 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 105

Conread position: 3-217
Cow position: chr1:6731368-6731152 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 192

Conread position: 3-217
Cow position: chr1:49824876-49825097 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 3-217
Cow position: chr1:67529245-67529026 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 3-218
Cow position: chr1:72422217-72422439 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 130

Conread position: 3-218
Cow position: chr1:98897501-98897725 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 13

Conread position: 3-219
Cow position: chr1:500365-500143 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 3-223
Cow position: chr1:13157383-13157146 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 3-229
Cow position: chr1:60045176-60044939 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 156

Conread position: 3-232
Cow position: chr1:14567453-14567679 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 104

Conread position: 3-234
Cow position: chr1:6590226-6589989 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 200

Conread position: 3-234
Cow position: chr1:19515428-19515666 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 0

Conread position: 3-237
Cow position: chr1:30862223-30862466 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 141

Conread position: 3-238
Cow position: chr1:22035797-22035553 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 136, 195

Conread position: 3-238
Cow position: chr1:50765803-50765559 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 159

Conread position: 3-248
Cow position: chr1:45223765-45223512 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 137, 65

Conread position: 3-253
Cow position: chr1:98467991-98467735 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 149

Conread position: 3-262
Cow position: chr1:6394746-6394479 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 3-270
Cow position: chr1:73457905-73458183 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 176

Conread position: 3-271
Cow position: chr1:100474428-100474139 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 3-272
Cow position: chr1:4444650-4444917 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 204

Conread position: 3-277
Cow position: chr1:38419215-38418934 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 18

Conread position: 3-278
Cow position: chr1:22147406-22147127 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 167, 27

Conread position: 3-278
Cow position: chr1:71350535-71350822 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 3-278
Cow position: chr1:98583937-98583664 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 136, 62

Conread position: 3-281
Cow position: chr1:100823229-100822946 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 173

Conread position: 3-285
Cow position: chr1:75250301-75250004 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 28

Conread position: 3-286
Cow position: chr1:4391079-4391390 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 3-286
Cow position: chr1:38055317-38055582 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 135, 18

Conread position: 3-287
Cow position: chr1:67919317-67919039 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 137, 66

Conread position: 3-289
Cow position: chr1:43855478-43855191 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 150, 62

Conread position: 3-290
Cow position: chr1:42482389-42482092 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 114

Conread position: 3-290
Cow position: chr1:56225971-56225682 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 45

Conread position: 3-292
Cow position: chr1:81582284-81582009 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 47

Conread position: 3-299
Cow position: chr1:42541780-42541477 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 137, 11

Conread position: 3-299
Cow position: chr1:78794047-78794344 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 62

Conread position: 3-305
Cow position: chr1:71665745-71666066 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 101

Conread position: 3-305
Cow position: chr1:72813806-72813488 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 3-305
Cow position: chr1:84103869-84104178 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 209

Conread position: 3-313
Cow position: chr1:5010644-5010972 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 202

Conread position: 3-313
Cow position: chr1:35600101-35600429 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 142

Conread position: 3-314
Cow position: chr1:78838976-78838665 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 141, 54

Conread position: 3-318
Cow position: chr1:4243141-4243480 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 315

Conread position: 3-319
Cow position: chr1:20950906-20950583 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 183

Conread position: 3-319
Cow position: chr1:39224750-39225063 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 54

Conread position: 3-319
Cow position: chr1:89449087-89448759 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 303

Conread position: 3-319
Cow position: chr1:92996697-92997037 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 92

Conread position: 3-321
Cow position: chr1:47886291-47886629 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 59, 166

Conread position: 3-324
Cow position: chr1:2975800-2976138 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 197

Conread position: 3-325
Cow position: chr1:86056889-86057202 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 202, 134

Conread position: 3-328
Cow position: chr1:70227502-70227840 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 277

Conread position: 3-330
Cow position: chr1:22526063-22525730 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 137, 67

Conread position: 3-331
Cow position: chr1:95638024-95637676 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 3-332
Cow position: chr1:21681345-21681668 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 202

Conread position: 3-334
Cow position: chr1:33720293-33719964 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 23

Conread position: 3-334
Cow position: chr1:62519555-62519204 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 174

Conread position: 3-336
Cow position: chr1:3324063-3323706 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 91

Conread position: 3-336
Cow position: chr1:23488314-23488664 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 3-336
Cow position: chr1:42256316-42256659 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 18

Conread position: 3-336
Cow position: chr1:55705058-55705405 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 23

Conread position: 3-336
Cow position: chr1:70538795-70538452 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 140, 67

Conread position: 3-336
Cow position: chr1:73545719-73546058 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 48, 195

Conread position: 3-336
Cow position: chr1:74929519-74929869 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 47, 308

Conread position: 3-336
Cow position: chr1:78857137-78857476 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 209

Conread position: 3-336
Cow position: chr1:88913509-88913162 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 135

Conread position: 3-336
Cow position: chr1:93528883-93528539 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 55

Conread position: 3-336
Cow position: chr1:98619391-98619054 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 188

Conread position: 3-337
Cow position: chr1:874852-874490 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 326

Conread position: 3-337
Cow position: chr1:8287441-8287770 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 97

Conread position: 3-337
Cow position: chr1:16766897-16767237 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 167

Conread position: 3-337
Cow position: chr1:21561209-21560878 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 251

Conread position: 3-337
Cow position: chr1:22192959-22192607 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 51, 309

Conread position: 3-337
Cow position: chr1:28563372-28563725 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 3-337
Cow position: chr1:29626721-29627067 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 105

Conread position: 3-337
Cow position: chr1:33206685-33207027 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 187

Conread position: 3-337
Cow position: chr1:40192514-40192839 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 49, 94

Conread position: 3-337
Cow position: chr1:54156545-54156894 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 3-337
Cow position: chr1:55428764-55429112 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 288

Conread position: 3-337
Cow position: chr1:64803908-64804260 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 257

Conread position: 3-337
Cow position: chr1:75383152-75382839 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 136, 62

Conread position: 3-337
Cow position: chr1:79164893-79165242 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 306

Conread position: 3-337
Cow position: chr1:81515428-81515087 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 212

Conread position: 3-337
Cow position: chr1:82337591-82337937 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 139

Conread position: 3-337
Cow position: chr1:96081667-96081328 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 3-339
Cow position: chr1:484274-484624 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 330

Conread position: 3-339
Cow position: chr1:100741471-100741129 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 161

Conread position: 3-339
Cow position: chr1:101280548-101280874 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 142

Conread position: 3-340
Cow position: chr1:23186613-23186955 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 245

Conread position: 3-345
Cow position: chr1:16060819-16061183 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 73

Conread position: 3-345
Cow position: chr1:44507157-44506803 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 79

Conread position: 3-345
Cow position: chr1:49082935-49082562 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 3-345
Cow position: chr1:49317312-49317661 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 67

Conread position: 3-345
Cow position: chr1:55230162-55229820 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 212

Conread position: 3-345
Cow position: chr1:59519100-59518756 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 87

Conread position: 3-345
Cow position: chr1:68763495-68763846 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 142

Conread position: 3-346
Cow position: chr1:724928-724573 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 23

Conread position: 3-346
Cow position: chr1:51446071-51445714 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 21

Conread position: 3-346
Cow position: chr1:65318766-65318412 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 93

Conread position: 3-346
Cow position: chr1:72034739-72035090 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 18

Conread position: 3-347
Cow position: chr1:42175917-42175558 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 306

Conread position: 3-351
Cow position: chr1:76612943-76613300 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 49, 259

Conread position: 3-368
Cow position: chr1:38754106-38753730 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 65

Conread position: 3-369
Cow position: chr1:46030175-46030544 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 108

Conread position: 3-389
Cow position: chr1:87072883-87072479 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 88

Conread position: 3-393
Cow position: chr1:3607984-3607606 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 136, 59

Conread position: 3-393
Cow position: chr1:89381463-89381049 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 49, 223

Conread position: 3-397
Cow position: chr1:10941909-10942325 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 107

Conread position: 3-397
Cow position: chr1:10964477-10964061 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 107

Conread position: 3-398
Cow position: chr1:56477774-56477361 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 49

Conread position: 3-414
Cow position: chr1:50930791-50931219 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 3-415
Cow position: chr1:3923615-3924045 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 52

Conread position: 3-417
Cow position: chr1:39426828-39427234 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 47

Conread position: 3-418
Cow position: chr1:68826735-68827159 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 26

Conread position: 3-420
Cow position: chr1:75745049-75744604 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 30, 11

Conread position: 3-424
Cow position: chr1:6166421-6165991 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 65

Conread position: 3-424
Cow position: chr1:34856436-34856889 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 3-424
Cow position: chr1:74083999-74084449 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-424
Cow position: chr1:100762263-100761829 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 285
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 156

Conread position: 3-425
Cow position: chr1:37321821-37322267 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 307
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 56

Conread position: 3-425
Cow position: chr1:54478505-54478061 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 137, 48

Conread position: 3-439
Cow position: chr1:47658537-47658080 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 285

Conread position: 3-450
Cow position: chr1:21954038-21954509 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 77

Conread position: 3-452
Cow position: chr1:25383858-25383374 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 333
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 181

Conread position: 3-470
Cow position: chr1:53623143-53622662 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 3-473
Cow position: chr1:63434609-63435112 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 311

Conread position: 3-483
Cow position: chr1:12464476-12464972 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 328
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 303

Conread position: 3-506
Cow position: chr1:23968876-23969375 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 47

Conread position: 3-510
Cow position: chr1:24132874-24133397 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 23

Conread position: 3-512
Cow position: chr1:48444002-48444526 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 58

Conread position: 3-521
Cow position: chr1:100552155-100551605 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 60

Conread position: 3-522
Cow position: chr1:1878212-1877669 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 195

Conread position: 3-529
Cow position: chr1:91065968-91066513 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 63

Conread position: 3-531
Cow position: chr1:36998371-36997830 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 182

Conread position: 3-531
Cow position: chr1:100422009-100421477 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 3-536
Cow position: chr1:72011633-72012175 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 62

Conread position: 3-536
Cow position: chr1:86113207-86113785 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 197

Conread position: 3-537
Cow position: chr1:90621317-90621867 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 306

Conread position: 3-538
Cow position: chr1:22628467-22629006 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 18

Conread position: 3-543
Cow position: chr1:11913692-11914250 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 37

Conread position: 3-544
Cow position: chr1:2075161-2075707 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 82

Conread position: 3-544
Cow position: chr1:6759855-6760397 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 61

Conread position: 3-544
Cow position: chr1:7740132-7739593 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 3-544
Cow position: chr1:15547654-15547091 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 65

Conread position: 3-544
Cow position: chr1:21130939-21131462 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 60

Conread position: 3-544
Cow position: chr1:22637235-22637772 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 126

Conread position: 3-544
Cow position: chr1:23633738-23634277 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 3-544
Cow position: chr1:41182025-41181462 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 61

Conread position: 3-544
Cow position: chr1:43352464-43353029 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 3-544
Cow position: chr1:51394607-51394030 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 251

Conread position: 3-544
Cow position: chr1:55357100-55357660 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 3-544
Cow position: chr1:56229425-56228872 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 3-544
Cow position: chr1:77620738-77620166 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 3-544
Cow position: chr1:81568840-81569417 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 254

Conread position: 3-544
Cow position: chr1:82936416-82936964 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 11

Conread position: 3-544
Cow position: chr1:96964508-96963939 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 3-545
Cow position: chr1:12222415-12222986 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 305

Conread position: 3-546
Cow position: chr1:68855355-68854799 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 263

Conread position: 3-555
Cow position: chr1:10778743-10778183 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 22

Conread position: 3-555
Cow position: chr1:15334077-15333516 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 147

Conread position: 3-555
Cow position: chr1:22730922-22730371 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 205

Conread position: 3-555
Cow position: chr1:52435464-52434892 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 478

Conread position: 3-555
Cow position: chr1:81228147-81228720 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 7

Conread position: 3-555
Cow position: chr1:81290693-81290130 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 75

Conread position: 3-559
Cow position: chr1:16855512-16856067 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 380
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 86

Conread position: 3-559
Cow position: chr1:100400015-100400591 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 3-560
Cow position: chr1:35162594-35162011 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 36

Conread position: 3-563
Cow position: chr1:54258758-54258173 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 123

Conread position: 4-166
Cow position: chr1:23373049-23372881 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 77

Conread position: 4-169
Cow position: chr1:1380189-1380016 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 4-175
Cow position: chr1:22231839-22231661 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 4-176
Cow position: chr1:89297919-89298098 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 118

Conread position: 4-176
Cow position: chr1:89301528-89301707 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 118

Conread position: 4-178
Cow position: chr1:34001231-34001057 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 64

Conread position: 4-178
Cow position: chr1:81364451-81364270 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 4-203
Cow position: chr1:2972108-2971901 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 4-203
Cow position: chr1:63079189-63078995 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 4-203
Cow position: chr1:69940636-69940838 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 4-230
Cow position: chr1:15103072-15102843 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 131

Conread position: 4-234
Cow position: chr1:86687973-86688207 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 63

Conread position: 4-248
Cow position: chr1:61035335-61035586 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 73

Conread position: 4-263
Cow position: chr1:52619018-52618758 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 198

Conread position: 4-290
Cow position: chr1:56618468-56618762 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 118

Conread position: 4-291
Cow position: chr1:5776334-5776041 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 227

Conread position: 4-291
Cow position: chr1:31794818-31795115 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 142

Conread position: 4-311
Cow position: chr1:91755471-91755167 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 208

Conread position: 4-334
Cow position: chr1:78811226-78810886 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 191

Conread position: 4-334
Cow position: chr1:102349571-102349905 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 204, 35

Conread position: 4-335
Cow position: chr1:34160016-34159681 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 54

Conread position: 4-336
Cow position: chr1:43340445-43340774 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 48, 102

Conread position: 4-337
Cow position: chr1:10655665-10655325 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 84

Conread position: 4-337
Cow position: chr1:11771895-11772233 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 48, 115

Conread position: 4-337
Cow position: chr1:71228283-71227924 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 4-337
Cow position: chr1:93499807-93499470 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 87

Conread position: 4-339
Cow position: chr1:74955844-74956182 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 200, 72

Conread position: 4-345
Cow position: chr1:20667562-20667906 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 13

Conread position: 4-345
Cow position: chr1:84905872-84906232 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 286

Conread position: 4-345
Cow position: chr1:99570309-99570630 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 71, 32

Conread position: 4-346
Cow position: chr1:63530747-63530411 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 206

Conread position: 4-409
Cow position: chr1:71119709-71119266 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 91

Conread position: 4-424
Cow position: chr1:31347746-31348168 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 229

Conread position: 4-433
Cow position: chr1:99609555-99609098 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 168

Conread position: 4-462
Cow position: chr1:87888578-87888108 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 4-517
Cow position: chr1:21508584-21508038 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 4-538
Cow position: chr1:68863207-68862698 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 367
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 204, 46

Conread position: 4-544
Cow position: chr1:31934692-31934127 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 4-544
Cow position: chr1:68817613-68818189 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 10

Conread position: 4-544
Cow position: chr1:78092228-78091652 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 559

Conread position: 4-555
Cow position: chr1:46693463-46694047 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 270

Conread position: 4-555
Cow position: chr1:79591292-79590709 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 5-167
Cow position: chr1:53402971-53402802 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 5-177
Cow position: chr1:52369994-52370160 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 48

Conread position: 5-194
Cow position: chr1:29329733-29329535 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 5-198
Cow position: chr1:22461052-22461248 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 5-199
Cow position: chr1:55753032-55753226 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 178

Conread position: 5-202
Cow position: chr1:99629349-99629163 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 89

Conread position: 5-203
Cow position: chr1:81858714-81858917 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 5-208
Cow position: chr1:96183801-96184009 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 29

Conread position: 5-308
Cow position: chr1:72105587-72105286 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 11

Conread position: 5-339
Cow position: chr1:101866313-101866655 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 30

Conread position: 5-399
Cow position: chr1:43388867-43389283 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 141

Conread position: 5-424
Cow position: chr1:6941653-6941206 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 292

Conread position: 5-424
Cow position: chr1:6959066-6958619 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 292

Conread position: 5-519
Cow position: chr1:102756248-102756772 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 48

Conread position: 5-531
Cow position: chr1:72068644-72069193 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 308

Conread position: 5-544
Cow position: chr1:54199207-54199760 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 6-163
Cow position: chr1:1802356-1802192 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 6-183
Cow position: chr1:31630097-31630282 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 6-202
Cow position: chr1:6031814-6031610 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 6-245
Cow position: chr1:51609564-51609309 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 17

Conread position: 6-284
Cow position: chr1:60987178-60986888 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 249

Conread position: 6-334
Cow position: chr1:41115535-41115868 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 49

Conread position: 6-337
Cow position: chr1:14308843-14309194 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 32, 28

Conread position: 6-345
Cow position: chr1:71078776-71079121 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 76

Conread position: 6-346
Cow position: chr1:42398010-42398361 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 97

Conread position: 6-346
Cow position: chr1:63595865-63596220 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 308

Conread position: 6-471
Cow position: chr1:1053768-1053281 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 125

Conread position: 6-511
Cow position: chr1:66898308-66898825 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 303

Conread position: 6-536
Cow position: chr1:8804-8251 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 245

Conread position: 6-544
Cow position: chr1:71045921-71045371 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 52

Conread position: 6-544
Cow position: chr1:94212408-94211854 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 35

Conread position: 7-210
Cow position: chr1:66752447-66752651 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 7-213
Cow position: chr1:89872153-89871942 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 11

Conread position: 7-306
Cow position: chr1:7306154-7305849 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 169

Conread position: 7-306
Cow position: chr1:43311583-43311902 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 300

Conread position: 7-336
Cow position: chr1:61005375-61005717 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 133

Conread position: 7-417
Cow position: chr1:6102715-6103166 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 311

Conread position: 7-543
Cow position: chr1:13547795-13548371 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 207

Conread position: 7-544
Cow position: chr1:11853501-11854071 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 8-178
Cow position: chr1:52450951-52450781 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 57

Conread position: 8-314
Cow position: chr1:648513-648190 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 296

Conread position: 8-543
Cow position: chr1:92370183-92370734 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 87

Conread position: 8-544
Cow position: chr1:68618751-68619299 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 9-164
Cow position: chr1:81471534-81471379 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 130, 110

Conread position: 9-168
Cow position: chr1:46004457-46004301 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 130, 15

Conread position: 11-336
Cow position: chr1:19569036-19568697 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 154

Conread position: 12-150
Cow position: chr1:42797059-42796915 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 12-337
Cow position: chr1:57880601-57880945 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 12-342
Cow position: chr1:72104034-72103685 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 12-535
Cow position: chr1:96019411-96018901 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 166

Conread position: 12-555
Cow position: chr1:68276594-68276017 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 378
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 131

Conread position: 13-178
Cow position: chr1:81638721-81638558 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 45

Conread position: 13-203
Cow position: chr1:76735297-76735493 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 136

Conread position: 13-210
Cow position: chr1:99322388-99322584 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 126, 36

Conread position: 13-336
Cow position: chr1:73960868-73960550 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 126, 12

Conread position: 13-538
Cow position: chr1:53374609-53374060 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 68

Conread position: 14-173
Cow position: chr1:88391282-88391118 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 76

Conread position: 14-324
Cow position: chr1:63139022-63138695 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 14-331
Cow position: chr1:31272272-31272591 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 51

Conread position: 16-168
Cow position: chr1:70146732-70146891 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 16-336
Cow position: chr1:53398149-53397836 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 65, 200

Conread position: 16-337
Cow position: chr1:89937202-89937512 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 48

Conread position: 16-345
Cow position: chr1:95057220-95056891 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 123

Conread position: 17-203
Cow position: chr1:49334214-49334407 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 153

Conread position: 17-251
Cow position: chr1:102768353-102768116 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 127

Conread position: 17-393
Cow position: chr1:88926204-88926609 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 261
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 17-544
Cow position: chr1:38277851-38278412 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 18-544
Cow position: chr1:52496947-52496398 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 157

Conread position: 18-549
Cow position: chr1:31348261-31348817 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 293

Conread position: 19-208
Cow position: chr1:2462549-2462363 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 124

Conread position: 19-336
Cow position: chr1:84283249-84282919 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 178

Conread position: 19-347
Cow position: chr1:53370259-53369913 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 148

Conread position: 21-544
Cow position: chr1:76019526-76020060 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 106

Conread position: 22-231
Cow position: chr1:15206704-15206917 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 72

Conread position: 23-555
Cow position: chr1:101822349-101822887 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 67

Conread position: 24-337
Cow position: chr1:93555001-93554687 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 220

Conread position: 26-336
Cow position: chr1:91811948-91811631 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 138

Conread position: 26-339
Cow position: chr1:69694832-69695161 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 32

Conread position: 26-415
Cow position: chr1:24534095-24534494 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 37

Conread position: 26-547
Cow position: chr1:53521080-53520529 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 425

Conread position: 29-414
Cow position: chr1:36932312-36931909 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 111, 21

Conread position: 30-161
Cow position: chr1:37543622-37543759 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 8

Conread position: 31-555
Cow position: chr1:52039794-52039246 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 109

Conread position: 32-345
Cow position: chr1:97611504-97611817 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 20

Conread position: 32-563
Cow position: chr1:41697213-41696662 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 35-544
Cow position: chr1:73584252-73584802 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 59

Conread position: 36-289
Cow position: chr1:26894822-26895085 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 106, 9

Conread position: 36-291
Cow position: chr1:32001166-32001433 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 40, 105

Conread position: 37-308
Cow position: chr1:42868790-42869063 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 37

Conread position: 37-314
Cow position: chr1:86073748-86073461 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 102, 267

Conread position: 39-544
Cow position: chr1:36875174-36874638 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 26

Conread position: 41-211
Cow position: chr1:85818399-85818228 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 41-346
Cow position: chr1:1185879-1185575 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 167

Conread position: 42-434
Cow position: chr1:61741821-61742238 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 163, 239

Conread position: 43-327
Cow position: chr1:53671605-53671884 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 7

Conread position: 44-203
Cow position: chr1:56711457-56711614 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 107

Conread position: 44-337
Cow position: chr1:4028009-4027709 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 84

Conread position: 44-337
Cow position: chr1:93044162-93043873 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 121

Conread position: 44-422
Cow position: chr1:31390444-31390842 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 96, 19

Conread position: 45-415
Cow position: chr1:47233333-47233726 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 5, 252

Conread position: 46-187
Cow position: chr1:19997834-19997971 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 21

Conread position: 48-177
Cow position: chr1:64706634-64706504 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 72

Conread position: 48-204
Cow position: chr1:24561370-24561525 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 20

Conread position: 48-269
Cow position: chr1:71796172-71796404 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 22

Conread position: 48-331
Cow position: chr1:70312653-70312955 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 31

Conread position: 48-336
Cow position: chr1:28177146-28176848 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 44

Conread position: 48-336
Cow position: chr1:74822590-74822300 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 62, 5

Conread position: 49-164
Cow position: chr1:57359602-57359486 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 49-178
Cow position: chr1:46100702-46100830 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 16

Conread position: 49-203
Cow position: chr1:45873930-45874093 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 49-203
Cow position: chr1:65639050-65638900 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 49-214
Cow position: chr1:24791806-24791972 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 49-219
Cow position: chr1:45478723-45478888 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 101

Conread position: 49-275
Cow position: chr1:45670772-45670542 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 159, 91

Conread position: 49-290
Cow position: chr1:10716636-10716391 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 159, 137

Conread position: 49-314
Cow position: chr1:85549942-85550211 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 49-322
Cow position: chr1:7023261-7022977 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 282

Conread position: 49-336
Cow position: chr1:52995166-52994872 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 222

Conread position: 49-336
Cow position: chr1:89741855-89742153 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 255

Conread position: 49-336
Cow position: chr1:98360264-98360560 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 159, 84

Conread position: 49-337
Cow position: chr1:97696883-97696584 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 91, 9

Conread position: 49-339
Cow position: chr1:90975947-90976245 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 49-346
Cow position: chr1:31607749-31608063 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 91, 100

Conread position: 49-346
Cow position: chr1:43872180-43872496 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 91, 85

Conread position: 49-346
Cow position: chr1:80336108-80336408 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 208

Conread position: 49-356
Cow position: chr1:95296467-95296785 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 108

Conread position: 49-425
Cow position: chr1:57297629-57297235 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 22, 15

Conread position: 49-544
Cow position: chr1:48105296-48105816 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 81

Conread position: 50-170
Cow position: chr1:99024092-99024213 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 50-199
Cow position: chr1:64019382-64019532 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 50-203
Cow position: chr1:19304709-19304556 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 151, 84

Conread position: 50-203
Cow position: chr1:43148405-43148563 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 151

Conread position: 50-219
Cow position: chr1:186142-186305 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 50-219
Cow position: chr1:8670911-8670743 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 89, 20

Conread position: 50-219
Cow position: chr1:68672463-68672628 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 50-219
Cow position: chr1:84203650-84203483 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 40

Conread position: 50-221
Cow position: chr1:28470971-28470792 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 50-238
Cow position: chr1:67918896-67918712 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 156

Conread position: 50-265
Cow position: chr1:98576186-98575961 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 50-273
Cow position: chr1:78067931-78068155 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 90, 40

Conread position: 50-281
Cow position: chr1:95153361-95153117 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 125

Conread position: 50-288
Cow position: chr1:39682133-39681890 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 217

Conread position: 50-291
Cow position: chr1:81580316-81580062 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 158, 204

Conread position: 50-293
Cow position: chr1:8347262-8347008 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 50-305
Cow position: chr1:77892275-77892021 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 91

Conread position: 50-332
Cow position: chr1:65909651-65909375 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 50-337
Cow position: chr1:1165725-1165449 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 90, 53

Conread position: 50-337
Cow position: chr1:97939094-97938813 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 15

Conread position: 50-338
Cow position: chr1:76436619-76436336 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 34, 41

Conread position: 50-341
Cow position: chr1:5580194-5579899 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 158, 40

Conread position: 50-342
Cow position: chr1:34771364-34771666 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 247

Conread position: 50-346
Cow position: chr1:85867728-85867433 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 156

Conread position: 50-387
Cow position: chr1:101834955-101834613 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 101

Conread position: 50-420
Cow position: chr1:21836070-21835692 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 90, 100

Conread position: 50-422
Cow position: chr1:77880596-77880973 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 25

Conread position: 50-425
Cow position: chr1:48581266-48580869 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 50-434
Cow position: chr1:33996785-33997182 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 156

Conread position: 50-460
Cow position: chr1:81613531-81613089 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 188

Conread position: 50-482
Cow position: chr1:69445471-69445056 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 29

Conread position: 50-497
Cow position: chr1:69264948-69264489 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 120

Conread position: 50-540
Cow position: chr1:82884256-82884761 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 58

Conread position: 50-541
Cow position: chr1:90868308-90868820 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 38

Conread position: 50-544
Cow position: chr1:4032771-4032270 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 401

Conread position: 50-544
Cow position: chr1:53308253-53308772 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 62

Conread position: 51-203
Cow position: chr1:3914781-3914933 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 104

Conread position: 51-237
Cow position: chr1:65881943-65881756 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 56

Conread position: 51-237
Cow position: chr1:84768741-84768934 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 51-298
Cow position: chr1:78697635-78697889 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 88, 9

Conread position: 51-308
Cow position: chr1:100569294-100569024 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 51-332
Cow position: chr1:81913017-81913299 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 88, 68

Conread position: 51-397
Cow position: chr1:40530964-40531342 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 352

Conread position: 51-483
Cow position: chr1:33330955-33331389 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 303
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 93

Conread position: 51-502
Cow position: chr1:34300413-34300886 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 250

Conread position: 51-545
Cow position: chr1:39068818-39069340 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 181

Conread position: 52-167
Cow position: chr1:67539696-67539580 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 87, 94

Conread position: 52-176
Cow position: chr1:90817129-90817003 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 52-190
Cow position: chr1:92603156-92603017 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 52-211
Cow position: chr1:54157431-54157271 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 13

Conread position: 52-255
Cow position: chr1:50461646-50461846 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 115

Conread position: 52-279
Cow position: chr1:58653304-58653529 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 154

Conread position: 52-283
Cow position: chr1:88397708-88397944 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 119

Conread position: 52-287
Cow position: chr1:1964878-1964634 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 111

Conread position: 52-291
Cow position: chr1:10617025-10616768 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 82

Conread position: 52-298
Cow position: chr1:89786046-89785794 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 152, 248

Conread position: 52-308
Cow position: chr1:5539139-5539404 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 213

Conread position: 52-308
Cow position: chr1:29481493-29481754 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 155

Conread position: 52-314
Cow position: chr1:14759218-14759484 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 91, 155

Conread position: 52-314
Cow position: chr1:53369339-53369072 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 47

Conread position: 52-314
Cow position: chr1:70297415-70297144 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 212

Conread position: 52-330
Cow position: chr1:23512524-23512804 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 52-332
Cow position: chr1:57420599-57420879 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 59

Conread position: 52-335
Cow position: chr1:98461421-98461140 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 27

Conread position: 52-337
Cow position: chr1:42968182-42968470 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 222

Conread position: 52-337
Cow position: chr1:91816634-91816926 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 177

Conread position: 52-345
Cow position: chr1:57637494-57637208 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 87, 154

Conread position: 52-346
Cow position: chr1:7186925-7186628 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 150

Conread position: 52-409
Cow position: chr1:84238986-84239352 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 152, 82

Conread position: 52-427
Cow position: chr1:52487844-52488221 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 52-446
Cow position: chr1:635331-634909 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 87, 223

Conread position: 52-555
Cow position: chr1:85361988-85361464 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 154

Conread position: 53-161
Cow position: chr1:13752311-13752420 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 53-177
Cow position: chr1:45673890-45673765 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 53-203
Cow position: chr1:20864189-20864042 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 53-223
Cow position: chr1:73936008-73936180 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 53-277
Cow position: chr1:6972663-6972431 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 53-336
Cow position: chr1:19885517-19885233 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 96

Conread position: 53-336
Cow position: chr1:70422440-70422149 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 138

Conread position: 53-336
Cow position: chr1:74928020-74927725 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 85, 0

Conread position: 53-337
Cow position: chr1:27145521-27145806 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 155, 22

Conread position: 53-337
Cow position: chr1:45007604-45007313 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 57, 211

Conread position: 53-347
Cow position: chr1:101267868-101268174 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 90, 97

Conread position: 54-173
Cow position: chr1:8353514-8353394 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 54-173
Cow position: chr1:22467450-22467570 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 66

Conread position: 54-308
Cow position: chr1:86340333-86340599 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 98

Conread position: 54-324
Cow position: chr1:71305816-71305548 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 148

Conread position: 54-336
Cow position: chr1:84255902-84255603 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 54-337
Cow position: chr1:24728705-24728993 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 104

Conread position: 54-337
Cow position: chr1:97779126-97778842 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 64

Conread position: 54-341
Cow position: chr1:98413905-98413606 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 16

Conread position: 54-396
Cow position: chr1:80422407-80422069 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 86

Conread position: 54-443
Cow position: chr1:40600172-40599773 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 16

Conread position: 54-484
Cow position: chr1:80988481-80988029 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 38

Conread position: 54-544
Cow position: chr1:11226113-11226625 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 65

Conread position: 55-204
Cow position: chr1:24570813-24570963 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 55-280
Cow position: chr1:58037150-58036921 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 153, 10

Conread position: 56-177
Cow position: chr1:33812348-33812227 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 36

Conread position: 56-200
Cow position: chr1:4582683-4582538 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 56-303
Cow position: chr1:77425236-77424978 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 56-336
Cow position: chr1:85647651-85647937 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 11

Conread position: 56-345
Cow position: chr1:101632205-101632503 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 14

Conread position: 56-366
Cow position: chr1:101701514-101701833 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 122

Conread position: 57-216
Cow position: chr1:79087727-79087889 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 57-346
Cow position: chr1:4291298-4290993 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 12, 90

Conread position: 58-170
Cow position: chr1:23055178-23055065 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 58-219
Cow position: chr1:43311900-43312062 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 148

Conread position: 58-336
Cow position: chr1:91874786-91875062 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 143, 72

Conread position: 59-337
Cow position: chr1:42360418-42360115 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 59-396
Cow position: chr1:25281527-25281908 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 59-512
Cow position: chr1:3138043-3137578 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 61-196
Cow position: chr1:42178873-42178737 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 62-219
Cow position: chr1:74081855-74082010 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 13

Conread position: 62-222
Cow position: chr1:38205602-38205443 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 145

Conread position: 64-214
Cow position: chr1:81629725-81629875 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 16

Conread position: 65-333
Cow position: chr1:68245196-68245460 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 67

Conread position: 65-414
Cow position: chr1:42138982-42138615 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 177

Conread position: 66-291
Cow position: chr1:3352577-3352806 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 102

Conread position: 66-337
Cow position: chr1:95177060-95176783 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 142, 30

Conread position: 66-345
Cow position: chr1:24876385-24876101 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 97

Conread position: 66-392
Cow position: chr1:52052594-52052932 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 225

Conread position: 66-410
Cow position: chr1:98594688-98594325 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 74, 98

Conread position: 66-425
Cow position: chr1:41252287-41252664 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 84

Conread position: 66-513
Cow position: chr1:82880767-82880316 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 89

Conread position: 66-544
Cow position: chr1:8349201-8349688 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 76

Conread position: 67-219
Cow position: chr1:7908159-7908006 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 139

Conread position: 67-278
Cow position: chr1:59147223-59147437 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 69

Conread position: 67-322
Cow position: chr1:20732826-20732562 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 138, 24

Conread position: 67-395
Cow position: chr1:78809998-78809652 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 231

Conread position: 68-477
Cow position: chr1:49796113-49795686 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 137, 77

Conread position: 70-212
Cow position: chr1:85712558-85712415 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 20

Conread position: 70-290
Cow position: chr1:6826180-6826400 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 138, 75

Conread position: 70-291
Cow position: chr1:87937014-87936787 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 18

Conread position: 70-345
Cow position: chr1:75933385-75933108 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 69, 83

Conread position: 70-511
Cow position: chr1:100706245-100705789 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 97

Conread position: 70-547
Cow position: chr1:19466170-19465683 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 71-338
Cow position: chr1:42545661-42545941 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 239

Conread position: 72-313
Cow position: chr1:30047486-30047726 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 55

Conread position: 72-420
Cow position: chr1:93810546-93810187 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 230

Conread position: 73-336
Cow position: chr1:53495577-53495312 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 57

Conread position: 73-446
Cow position: chr1:72285952-72286331 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 150

Conread position: 73-511
Cow position: chr1:66430407-66429954 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 88

Conread position: 74-503
Cow position: chr1:95215075-95215515 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 132

Conread position: 74-538
Cow position: chr1:37309404-37309884 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 172

Conread position: 75-276
Cow position: chr1:30189266-30189049 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 81

Conread position: 75-293
Cow position: chr1:61542805-61543032 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 64, 75

Conread position: 75-339
Cow position: chr1:81868614-81868883 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 217

Conread position: 76-215
Cow position: chr1:102345922-102346064 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 72

Conread position: 76-292
Cow position: chr1:55819164-55818947 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 6

Conread position: 77-336
Cow position: chr1:64678807-64678546 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 188

Conread position: 79-415
Cow position: chr1:5023652-5023991 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 62, 169

Conread position: 80-336
Cow position: chr1:60281482-60281215 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 225

Conread position: 81-556
Cow position: chr1:81355595-81356095 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 205

Conread position: 82-337
Cow position: chr1:75142104-75141846 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 174

Conread position: 82-337
Cow position: chr1:77683459-77683201 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 208

Conread position: 82-544
Cow position: chr1:54732380-54732823 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 7

Conread position: 83-478
Cow position: chr1:88652743-88652317 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 226

Conread position: 83-544
Cow position: chr1:26702100-26702577 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 84-535
Cow position: chr1:46218678-46218210 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 88

Conread position: 85-336
Cow position: chr1:60707507-60707251 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 78

Conread position: 85-393
Cow position: chr1:56635202-56634869 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 110

Conread position: 87-544
Cow position: chr1:53425279-53424813 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 167

Conread position: 89-530
Cow position: chr1:90641128-90640666 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 46

Conread position: 90-291
Cow position: chr1:40482314-40482515 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 17

Conread position: 90-334
Cow position: chr1:30504600-30504353 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 156

Conread position: 90-334
Cow position: chr1:43703508-43703254 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 199

Conread position: 90-398
Cow position: chr1:51531850-51531539 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 65

Conread position: 91-338
Cow position: chr1:69540380-69540143 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 145, 47

Conread position: 92-425
Cow position: chr1:55146895-55146538 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 36

Conread position: 96-378
Cow position: chr1:89485673-89485370 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 234

Conread position: 98-544
Cow position: chr1:4374246-4374718 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 137

Conread position: 100-339
Cow position: chr1:101946625-101946865 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 198

Conread position: 100-487
Cow position: chr1:85597027-85596623 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 68

Conread position: 102-336
Cow position: chr1:6788196-6788441 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 203

Conread position: 106-345
Cow position: chr1:98311155-98310901 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 111-337
Cow position: chr1:9470320-9470554 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 191

Conread position: 114-539
Cow position: chr1:102647198-102647644 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 188

Conread position: 117-345
Cow position: chr1:51654496-51654246 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 192

Conread position: 120-336
Cow position: chr1:91800531-91800757 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 135

Conread position: 120-346
Cow position: chr1:89498022-89497800 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 19

Conread position: 120-396
Cow position: chr1:79278378-79278674 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 26

Conread position: 120-544
Cow position: chr1:95654644-95655063 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 293
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 60

Conread position: 121-336
Cow position: chr1:1991350-1991576 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 54

Conread position: 121-544
Cow position: chr1:55135904-55135462 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 162

Conread position: 123-425
Cow position: chr1:84116437-84116141 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 17, 50

Conread position: 124-335
Cow position: chr1:45535771-45535551 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 167

Conread position: 126-555
Cow position: chr1:57639452-57639892 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 294

Conread position: 127-336
Cow position: chr1:24235457-24235672 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 173

Conread position: 127-418
Cow position: chr1:57395874-57396183 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 94

Conread position: 128-336
Cow position: chr1:24445567-24445782 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 33

Conread position: 128-539
Cow position: chr1:61742400-61742811 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 15, 167

Conread position: 129-563
Cow position: chr1:61723961-61724419 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 11

Conread position: 130-544
Cow position: chr1:95017471-95017891 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 84

Conread position: 132-337
Cow position: chr1:98372689-98372476 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 134-345
Cow position: chr1:82443400-82443621 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 6, 12

Conread position: 134-511
Cow position: chr1:100770697-100771081 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 159

Conread position: 138-337
Cow position: chr1:93228575-93228369 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 155

Conread position: 139-345
Cow position: chr1:80631748-80631534 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 139-346
Cow position: chr1:70028629-70028418 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 160

Conread position: 148-470
Cow position: chr1:22448541-22448890 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 153

Conread position: 149-337
Cow position: chr1:31234892-31235084 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 95

Conread position: 149-528
Cow position: chr1:43379985-43380387 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 315

Conread position: 150-544
Cow position: chr1:1802176-1801768 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 13

Conread position: 153-424
Cow position: chr1:57263957-57264246 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 54, 152

Conread position: 154-452
Cow position: chr1:3751904-3752231 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 154-544
Cow position: chr1:30034567-30034171 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 109

Conread position: 155-334
Cow position: chr1:81471166-81470979 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 38

Conread position: 155-345
Cow position: chr1:91834256-91834063 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 100, 85

Conread position: 156-337
Cow position: chr1:68996212-68996019 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 157-335
Cow position: chr1:51684838-51684649 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 153

Conread position: 157-337
Cow position: chr1:82505007-82504814 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 147

Conread position: 159-326
Cow position: chr1:6961937-6961761 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 145

Conread position: 159-335
Cow position: chr1:11770263-11770445 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 142

Conread position: 159-555
Cow position: chr1:68282820-68282403 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 160-422
Cow position: chr1:38544436-38544705 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 45, 134

Conread position: 163-337
Cow position: chr1:79663648-79663818 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 109

Conread position: 164-336
Cow position: chr1:24655984-24655806 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 164-543
Cow position: chr1:78783572-78783168 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 165-544
Cow position: chr1:83593785-83594156 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 169-396
Cow position: chr1:64962648-64962887 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 70

Conread position: 171-544
Cow position: chr1:15311882-15311486 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 172-336
Cow position: chr1:98557768-98557935 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 90

Conread position: 172-343
Cow position: chr1:60372249-60372426 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 172-345
Cow position: chr1:81638421-81638238 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 181-342
Cow position: chr1:89437931-89438097 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 108

Conread position: 205-563
Cow position: chr1:91039197-91039559 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 35

Conread position: 208-338
Cow position: chr1:45673684-45673553 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 89

Conread position: 208-465
Cow position: chr1:33811902-33811633 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 86

Conread position: 211-415
Cow position: chr1:75967403-75967185 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 85

Conread position: 211-490
Cow position: chr1:731970-732251 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 29

Conread position: 240-462
Cow position: chr1:3076458-3076687 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 51

Conread position: 244-544
Cow position: chr1:24201810-24202109 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 43

Show alignments to all cow chromosomes.