Cow genome map

Conread name: Pig1-107L24

Conread position: 1-170
Cow position: chr15:34223772-34223943 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 29

Conread position: 1-556
Cow position: chr15:43626369-43626941 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 308

Conread position: 2-185
Cow position: chr15:17124566-17124376 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 2-185
Cow position: chr15:44119564-44119379 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 29

Conread position: 2-253
Cow position: chr15:41624992-41624719 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 2-290
Cow position: chr15:16928185-16927891 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 2-334
Cow position: chr15:23275438-23275783 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 233

Conread position: 2-337
Cow position: chr15:26919364-26919026 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 34

Conread position: 2-343
Cow position: chr15:33642995-33643348 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 78

Conread position: 2-346
Cow position: chr15:35641917-35642281 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 118

Conread position: 2-424
Cow position: chr15:286377-286814 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 304

Conread position: 3-141
Cow position: chr15:14760734-14760590 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 3-145
Cow position: chr15:41049551-41049410 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 131, 11

Conread position: 3-149
Cow position: chr15:6332556-6332411 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 38

Conread position: 3-152
Cow position: chr15:36457711-36457564 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 109

Conread position: 3-159
Cow position: chr15:40562777-40562616 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 3-160
Cow position: chr15:8715276-8715115 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 13

Conread position: 3-160
Cow position: chr15:16644882-16644719 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 39

Conread position: 3-160
Cow position: chr15:18941940-18942096 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 48

Conread position: 3-164
Cow position: chr15:12913593-12913427 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 3-164
Cow position: chr15:17140111-17139952 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 137, 33

Conread position: 3-166
Cow position: chr15:16415202-16415370 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 14

Conread position: 3-168
Cow position: chr15:48052692-48052529 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 13

Conread position: 3-170
Cow position: chr15:9314632-9314803 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 3-170
Cow position: chr15:41321046-41320876 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 3-173
Cow position: chr15:5691008-5691178 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 138

Conread position: 3-173
Cow position: chr15:12974240-12974419 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 114

Conread position: 3-173
Cow position: chr15:16230135-16230302 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 136, 50

Conread position: 3-173
Cow position: chr15:20566034-20566207 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 142

Conread position: 3-174
Cow position: chr15:4500604-4500784 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 3-177
Cow position: chr15:52791846-52792021 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 103

Conread position: 3-178
Cow position: chr15:37719682-37719507 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 94

Conread position: 3-186
Cow position: chr15:38386492-38386679 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 161

Conread position: 3-190
Cow position: chr15:18763134-18762942 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 133

Conread position: 3-195
Cow position: chr15:26442120-26442317 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 3-199
Cow position: chr15:19002377-19002170 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 3-200
Cow position: chr15:48095262-48095467 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 157

Conread position: 3-203
Cow position: chr15:4248054-4248258 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 3-203
Cow position: chr15:15154205-15154410 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 3-203
Cow position: chr15:22444081-22443878 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 153

Conread position: 3-204
Cow position: chr15:7956173-7955961 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 3-204
Cow position: chr15:26529801-26530001 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 62

Conread position: 3-206
Cow position: chr15:21363047-21362842 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 3-210
Cow position: chr15:37970709-37970929 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 3-210
Cow position: chr15:38652697-38652484 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 105

Conread position: 3-213
Cow position: chr15:39474029-39473815 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 143

Conread position: 3-216
Cow position: chr15:19942503-19942716 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 205, 67

Conread position: 3-216
Cow position: chr15:31637201-31637424 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 43

Conread position: 3-216
Cow position: chr15:53028268-53028486 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 3-220
Cow position: chr15:43114812-43114601 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 132

Conread position: 3-232
Cow position: chr15:20950158-20950395 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 155

Conread position: 3-237
Cow position: chr15:42888929-42888688 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 146

Conread position: 3-238
Cow position: chr15:38827409-38827174 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 49

Conread position: 3-246
Cow position: chr15:19554020-19553763 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 79

Conread position: 3-253
Cow position: chr15:14987901-14988157 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 205, 64

Conread position: 3-264
Cow position: chr15:25349880-25350146 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 87

Conread position: 3-264
Cow position: chr15:39286505-39286232 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 103

Conread position: 3-269
Cow position: chr15:10400369-10400085 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 3-273
Cow position: chr15:5408988-5408719 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 136, 147

Conread position: 3-274
Cow position: chr15:28047855-28047564 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 21

Conread position: 3-278
Cow position: chr15:19950392-19950668 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 137, 31

Conread position: 3-282
Cow position: chr15:13284941-13285210 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 138, 21

Conread position: 3-286
Cow position: chr15:40379118-40379414 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 195

Conread position: 3-287
Cow position: chr15:43674040-43673734 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 49, 41

Conread position: 3-288
Cow position: chr15:31928992-31928694 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-289
Cow position: chr15:9465580-9465883 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-291
Cow position: chr15:5158277-5158582 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 3-312
Cow position: chr15:22553635-22553316 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 59, 146

Conread position: 3-312
Cow position: chr15:49273868-49274178 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 77

Conread position: 3-314
Cow position: chr15:662558-662243 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 68

Conread position: 3-314
Cow position: chr15:4179033-4178708 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 135, 67

Conread position: 3-314
Cow position: chr15:4418496-4418172 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 3-314
Cow position: chr15:21803759-21803442 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 123

Conread position: 3-317
Cow position: chr15:1502819-1503135 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 139

Conread position: 3-322
Cow position: chr15:10512356-10512034 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 7

Conread position: 3-332
Cow position: chr15:53037056-53036722 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 23

Conread position: 3-334
Cow position: chr15:29026977-29026632 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 175

Conread position: 3-335
Cow position: chr15:1330203-1329853 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 49, 97

Conread position: 3-335
Cow position: chr15:12722990-12723337 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 3-335
Cow position: chr15:36887745-36888073 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 108

Conread position: 3-335
Cow position: chr15:47844182-47843861 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 138, 10

Conread position: 3-336
Cow position: chr15:2968240-2968584 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 3-336
Cow position: chr15:9622086-9622440 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 3-336
Cow position: chr15:11658677-11658318 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 317

Conread position: 3-336
Cow position: chr15:22531579-22531907 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 136, 71

Conread position: 3-336
Cow position: chr15:25208853-25208518 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 49, 198

Conread position: 3-336
Cow position: chr15:26158693-26158366 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 92

Conread position: 3-336
Cow position: chr15:36435108-36435457 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 49, 307

Conread position: 3-337
Cow position: chr15:608049-608398 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 3-337
Cow position: chr15:6905445-6905789 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 3-337
Cow position: chr15:7429872-7430229 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 306

Conread position: 3-337
Cow position: chr15:27900599-27900253 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 45

Conread position: 3-337
Cow position: chr15:30001602-30001937 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 204

Conread position: 3-337
Cow position: chr15:39405648-39405983 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 3-337
Cow position: chr15:40798512-40798177 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 21, 32

Conread position: 3-337
Cow position: chr15:46563571-46563242 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 135, 67

Conread position: 3-337
Cow position: chr15:49922041-49922392 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 3-338
Cow position: chr15:21941942-21941594 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 251

Conread position: 3-339
Cow position: chr15:22530987-22531315 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 214
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 3-340
Cow position: chr15:34139897-34140232 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 13

Conread position: 3-342
Cow position: chr15:16657376-16657750 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 3-345
Cow position: chr15:1722935-1722590 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 23

Conread position: 3-345
Cow position: chr15:11996122-11995767 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 298

Conread position: 3-345
Cow position: chr15:12304545-12304901 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 21

Conread position: 3-345
Cow position: chr15:23572783-23572419 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 191

Conread position: 3-345
Cow position: chr15:25667319-25666963 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 305

Conread position: 3-345
Cow position: chr15:32324302-32323945 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 3-345
Cow position: chr15:50322517-50322855 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 27

Conread position: 3-346
Cow position: chr15:225897-225544 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 247

Conread position: 3-346
Cow position: chr15:795111-794757 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 62

Conread position: 3-348
Cow position: chr15:85340-84983 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 3-369
Cow position: chr15:50350749-50351118 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 145

Conread position: 3-389
Cow position: chr15:20290152-20289766 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 47

Conread position: 3-396
Cow position: chr15:22938861-22938449 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 251

Conread position: 3-396
Cow position: chr15:35112967-35112560 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 18

Conread position: 3-398
Cow position: chr15:21420853-21421271 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 18

Conread position: 3-399
Cow position: chr15:10246089-10245678 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 138

Conread position: 3-408
Cow position: chr15:52316966-52317362 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 258
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 77

Conread position: 3-416
Cow position: chr15:5717625-5718027 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 55

Conread position: 3-418
Cow position: chr15:21893686-21894132 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 149

Conread position: 3-420
Cow position: chr15:19771043-19771479 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 154

Conread position: 3-422
Cow position: chr15:27973300-27972861 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 58

Conread position: 3-424
Cow position: chr15:14020403-14020827 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 137, 55

Conread position: 3-430
Cow position: chr15:48851587-48851136 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 299
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 116

Conread position: 3-442
Cow position: chr15:39599355-39599813 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 3-473
Cow position: chr15:22939418-22938931 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 285

Conread position: 3-494
Cow position: chr15:30981858-30982340 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 28

Conread position: 3-511
Cow position: chr15:45520-44977 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 312

Conread position: 3-515
Cow position: chr15:26896793-26896274 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 198

Conread position: 3-530
Cow position: chr15:17233092-17233646 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 437

Conread position: 3-537
Cow position: chr15:4138040-4138599 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 136

Conread position: 3-538
Cow position: chr15:43827866-43827306 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 131

Conread position: 3-544
Cow position: chr15:4919164-4918584 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 3-544
Cow position: chr15:6647356-6647924 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 240

Conread position: 3-544
Cow position: chr15:6969893-6970453 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 3-544
Cow position: chr15:16112300-16112878 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 455

Conread position: 3-544
Cow position: chr15:17196051-17196620 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 292

Conread position: 3-544
Cow position: chr15:20370546-20369996 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 298

Conread position: 3-544
Cow position: chr15:20459405-20458826 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 562

Conread position: 3-544
Cow position: chr15:20534547-20533974 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 256

Conread position: 3-544
Cow position: chr15:24616473-24617040 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 426

Conread position: 3-544
Cow position: chr15:24797897-24797327 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 98

Conread position: 3-544
Cow position: chr15:37381535-37382099 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 138

Conread position: 3-544
Cow position: chr15:47821739-47822262 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 61

Conread position: 3-555
Cow position: chr15:36391577-36392149 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 410

Conread position: 3-558
Cow position: chr15:26079440-26078880 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 4-203
Cow position: chr15:7751007-7750801 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 4-210
Cow position: chr15:50552627-50552415 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 121

Conread position: 4-211
Cow position: chr15:1284168-1284390 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 4-218
Cow position: chr15:20856572-20856350 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 4-237
Cow position: chr15:25571905-25571658 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 4-278
Cow position: chr15:11424879-11425167 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 143

Conread position: 4-332
Cow position: chr15:21822020-21821678 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 4-333
Cow position: chr15:18975856-18975518 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 12

Conread position: 4-336
Cow position: chr15:22532160-22532488 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 167

Conread position: 4-337
Cow position: chr15:16667591-16667251 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 4-337
Cow position: chr15:17084113-17084460 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 48, 121

Conread position: 4-346
Cow position: chr15:12785336-12785692 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 12

Conread position: 4-424
Cow position: chr15:17100797-17100360 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 46

Conread position: 4-430
Cow position: chr15:51427919-51427460 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 310
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 122, 312

Conread position: 4-464
Cow position: chr15:5420975-5420508 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 311
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 265

Conread position: 4-483
Cow position: chr15:4485055-4485559 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 216

Conread position: 4-544
Cow position: chr15:4677091-4676528 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 205

Conread position: 4-544
Cow position: chr15:16603736-16604298 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 56

Conread position: 4-555
Cow position: chr15:2953226-2952662 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 306

Conread position: 5-290
Cow position: chr15:34284502-34284205 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 5-337
Cow position: chr15:23798614-23798272 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 134, 58

Conread position: 5-381
Cow position: chr15:14576238-14576633 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 261
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 14

Conread position: 5-510
Cow position: chr15:45245633-45245109 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 291

Conread position: 5-544
Cow position: chr15:19402913-19403451 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 118

Conread position: 5-555
Cow position: chr15:51822058-51822628 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 207

Conread position: 6-133
Cow position: chr15:20906120-20905993 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-176
Cow position: chr15:21710201-21710024 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 95

Conread position: 6-193
Cow position: chr15:38420646-38420453 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 24

Conread position: 6-306
Cow position: chr15:10231834-10231521 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 134, 62

Conread position: 6-318
Cow position: chr15:36353578-36353901 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 56, 299

Conread position: 6-321
Cow position: chr15:24982270-24981957 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 199

Conread position: 6-324
Cow position: chr15:16439925-16439590 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 6-324
Cow position: chr15:22930441-22930101 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 33

Conread position: 6-337
Cow position: chr15:1804424-1804080 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 50

Conread position: 6-337
Cow position: chr15:5443890-5444232 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 266

Conread position: 6-337
Cow position: chr15:31857498-31857840 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 6-339
Cow position: chr15:44436666-44436988 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 137, 18

Conread position: 6-342
Cow position: chr15:38394336-38394677 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 204

Conread position: 6-345
Cow position: chr15:8006887-8007242 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 132

Conread position: 6-346
Cow position: chr15:4861998-4861654 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 206

Conread position: 6-387
Cow position: chr15:10088228-10088633 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 300

Conread position: 6-424
Cow position: chr15:38883051-38883513 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 157

Conread position: 6-458
Cow position: chr15:36621309-36621809 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 85

Conread position: 6-534
Cow position: chr15:33284785-33285337 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 6-544
Cow position: chr15:32980125-32979555 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 20

Conread position: 6-544
Cow position: chr15:45478908-45479483 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 6-549
Cow position: chr15:5235082-5234524 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 33

Conread position: 8-257
Cow position: chr15:20723072-20722817 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 7, 63

Conread position: 9-319
Cow position: chr15:24031109-24031420 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 203

Conread position: 10-216
Cow position: chr15:864093-864300 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 42, 189

Conread position: 10-416
Cow position: chr15:6462580-6462154 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 78

Conread position: 12-167
Cow position: chr15:33784912-33784745 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 12-218
Cow position: chr15:24453162-24452948 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 212

Conread position: 12-278
Cow position: chr15:13554021-13554295 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 175

Conread position: 12-307
Cow position: chr15:23866157-23865846 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 242

Conread position: 12-451
Cow position: chr15:38806590-38806116 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 307
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 13-213
Cow position: chr15:39619055-39619261 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 189

Conread position: 13-314
Cow position: chr15:28823899-28823590 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 70

Conread position: 13-315
Cow position: chr15:17337285-17337588 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 45

Conread position: 13-324
Cow position: chr15:7308242-7307914 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 13-555
Cow position: chr15:28038704-28039231 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 368
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 49

Conread position: 14-543
Cow position: chr15:26912156-26911606 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 130

Conread position: 15-297
Cow position: chr15:50664552-50664274 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 189, 61

Conread position: 16-425
Cow position: chr15:1297663-1298093 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 54

Conread position: 16-563
Cow position: chr15:28924839-28924272 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 18-257
Cow position: chr15:41528050-41527804 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 52, 140

Conread position: 18-318
Cow position: chr15:38037027-38036706 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 19-187
Cow position: chr15:3591319-3591484 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 5

Conread position: 19-219
Cow position: chr15:36388218-36388417 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 120, 27

Conread position: 19-474
Cow position: chr15:8427931-8428411 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 37

Conread position: 26-161
Cow position: chr15:45574703-45574568 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 69

Conread position: 26-337
Cow position: chr15:36773759-36773446 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 182, 39

Conread position: 34-290
Cow position: chr15:31560451-31560196 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 109

Conread position: 35-235
Cow position: chr15:5535420-5535218 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 37-314
Cow position: chr15:9106981-9107265 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 103, 37

Conread position: 39-285
Cow position: chr15:37865311-37865567 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 243

Conread position: 42-223
Cow position: chr15:52432291-52432477 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 42-558
Cow position: chr15:33306060-33306590 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 26

Conread position: 47-203
Cow position: chr15:5566884-5567034 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 28

Conread position: 47-280
Cow position: chr15:43788215-43788448 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 93

Conread position: 48-318
Cow position: chr15:2145185-2144898 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 128

Conread position: 49-209
Cow position: chr15:23719528-23719367 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 49-237
Cow position: chr15:4509842-4509667 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 62

Conread position: 49-275
Cow position: chr15:35441123-35440884 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 101

Conread position: 49-297
Cow position: chr15:5929852-5930104 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 123

Conread position: 49-337
Cow position: chr15:45584688-45584973 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 101

Conread position: 49-565
Cow position: chr15:13554309-13554838 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 26

Conread position: 50-165
Cow position: chr15:6046922-6046806 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 50-176
Cow position: chr15:51024259-51024132 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 50-195
Cow position: chr15:13701813-13701667 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 50-199
Cow position: chr15:10431768-10431919 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 50-218
Cow position: chr15:39520124-39520295 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 50-227
Cow position: chr15:44280058-44280242 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 50-233
Cow position: chr15:16530812-16530628 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 152

Conread position: 50-238
Cow position: chr15:32977889-32977694 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 19

Conread position: 50-272
Cow position: chr15:6129007-6128780 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 50

Conread position: 50-276
Cow position: chr15:12604-12843 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 50-286
Cow position: chr15:23780111-23779869 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 89, 58

Conread position: 50-286
Cow position: chr15:35945485-35945730 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 12, 47

Conread position: 50-324
Cow position: chr15:20422821-20422540 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 20

Conread position: 50-334
Cow position: chr15:5726281-5726573 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 50-337
Cow position: chr15:10608349-10608054 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 50-337
Cow position: chr15:22871570-22871858 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 67

Conread position: 50-345
Cow position: chr15:39316886-39316575 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 50-347
Cow position: chr15:25386395-25386705 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 144

Conread position: 50-409
Cow position: chr15:39621294-39621679 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 50-537
Cow position: chr15:10737784-10737307 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 51-278
Cow position: chr15:14474300-14474532 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 51-337
Cow position: chr15:21389206-21388916 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 29

Conread position: 51-345
Cow position: chr15:26573337-26573647 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 90, 38

Conread position: 51-422
Cow position: chr15:36782374-36781982 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 65

Conread position: 52-181
Cow position: chr15:12357577-12357703 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 27

Conread position: 52-195
Cow position: chr15:697940-698084 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 52-202
Cow position: chr15:24629406-24629256 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 9

Conread position: 52-278
Cow position: chr15:36793536-36793298 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 88, 203

Conread position: 52-311
Cow position: chr15:11987449-11987183 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 52-335
Cow position: chr15:5072126-5071850 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 87, 120

Conread position: 52-337
Cow position: chr15:43914137-43913836 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 87, 125

Conread position: 52-338
Cow position: chr15:5571671-5571383 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 152

Conread position: 52-342
Cow position: chr15:23114792-23115101 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 123

Conread position: 52-345
Cow position: chr15:50302142-50302443 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 75

Conread position: 52-439
Cow position: chr15:31283343-31283739 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 154

Conread position: 53-327
Cow position: chr15:2141344-2141058 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 203

Conread position: 53-531
Cow position: chr15:18605366-18605844 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 153

Conread position: 54-337
Cow position: chr15:52454391-52454693 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 259

Conread position: 55-202
Cow position: chr15:18776790-18776642 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 55-235
Cow position: chr15:31024954-31025139 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 103

Conread position: 55-336
Cow position: chr15:51898189-51898478 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 250

Conread position: 55-345
Cow position: chr15:51779029-51779336 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 257

Conread position: 55-411
Cow position: chr15:29604739-29604374 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 86, 151

Conread position: 56-190
Cow position: chr15:20488121-20487989 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 17

Conread position: 56-195
Cow position: chr15:3690312-3690452 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 56-213
Cow position: chr15:14261295-14261139 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 83, 105

Conread position: 56-544
Cow position: chr15:33976733-33976217 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 200

Conread position: 57-228
Cow position: chr15:8370301-8370130 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 165

Conread position: 58-250
Cow position: chr15:14176535-14176337 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 58-473
Cow position: chr15:19186649-19186213 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 76

Conread position: 58-543
Cow position: chr15:10457049-10456525 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 347
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 79

Conread position: 59-234
Cow position: chr15:9497535-9497353 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 60-289
Cow position: chr15:35205186-35204943 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 30

Conread position: 61-555
Cow position: chr15:22168041-22168550 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 14

Conread position: 62-311
Cow position: chr15:24411388-24411639 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 27

Conread position: 65-291
Cow position: chr15:28258486-28258248 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 66-190
Cow position: chr15:44853216-44853341 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 66-298
Cow position: chr15:9781443-9781679 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 84

Conread position: 66-323
Cow position: chr15:12870892-12870626 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 230

Conread position: 66-334
Cow position: chr15:41000097-40999820 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 9

Conread position: 66-336
Cow position: chr15:16307393-16307663 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 142

Conread position: 67-219
Cow position: chr15:38845874-38846027 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 13

Conread position: 67-271
Cow position: chr15:31042841-31043053 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 73, 23

Conread position: 67-415
Cow position: chr15:22136663-22137030 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 74

Conread position: 67-425
Cow position: chr15:2799954-2800323 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 97

Conread position: 67-543
Cow position: chr15:34207214-34206724 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 234

Conread position: 68-238
Cow position: chr15:19920359-19920184 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 104

Conread position: 70-286
Cow position: chr15:50088956-50089180 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 50

Conread position: 70-337
Cow position: chr15:53045901-53045627 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 141, 60

Conread position: 70-418
Cow position: chr15:12170220-12170588 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 101

Conread position: 70-545
Cow position: chr15:50177085-50177574 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 329
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 71

Conread position: 71-327
Cow position: chr15:37205025-37205286 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 72, 159

Conread position: 73-336
Cow position: chr15:15573856-15573573 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 65, 264

Conread position: 73-421
Cow position: chr15:43599168-43599512 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 67, 227

Conread position: 82-337
Cow position: chr15:20351820-20352081 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 57, 209

Conread position: 82-538
Cow position: chr15:44640884-44641367 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 210

Conread position: 82-555
Cow position: chr15:47843263-47842781 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 278

Conread position: 90-336
Cow position: chr15:35417629-35417374 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 237

Conread position: 90-337
Cow position: chr15:13387073-13387331 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 59

Conread position: 90-424
Cow position: chr15:4534907-4535263 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 44

Conread position: 92-424
Cow position: chr15:23768259-23767909 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 96-346
Cow position: chr15:16639779-16640040 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 148

Conread position: 102-278
Cow position: chr15:5244821-5244635 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 111-345
Cow position: chr15:41620173-41619927 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 94, 188

Conread position: 117-336
Cow position: chr15:17859203-17858987 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 33

Conread position: 120-521
Cow position: chr15:49739008-49738594 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 120-544
Cow position: chr15:5535785-5536225 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 121-484
Cow position: chr15:27280898-27281278 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 105

Conread position: 131-291
Cow position: chr15:16448720-16448893 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 132-539
Cow position: chr15:18206474-18206048 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 7, 35

Conread position: 144-418
Cow position: chr15:14856416-14856134 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 64, 256

Conread position: 145-334
Cow position: chr15:9871365-9871165 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 160

Conread position: 145-544
Cow position: chr15:6331987-6331586 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 121

Conread position: 149-538
Cow position: chr15:33604991-33605386 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 37

Conread position: 154-544
Cow position: chr15:24038345-24037934 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 153

Conread position: 155-336
Cow position: chr15:12441763-12441574 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 159-346
Cow position: chr15:20725550-20725358 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 24

Conread position: 159-532
Cow position: chr15:16936782-16936403 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 159-544
Cow position: chr15:15708048-15707643 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 146

Conread position: 163-342
Cow position: chr15:10845789-10845979 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 164-555
Cow position: chr15:13684197-13683801 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 166-346
Cow position: chr15:34145081-34144894 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 135

Conread position: 168-538
Cow position: chr15:23775864-23775491 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 74

Conread position: 180-337
Cow position: chr15:21522873-21523039 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 123

Conread position: 208-555
Cow position: chr15:38846224-38846574 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 231

Conread position: 235-496
Cow position: chr15:9888988-9888720 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 70

Show alignments to all cow chromosomes.