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Cow genome map

           
Conread name:
           
Pig1-107L24
        

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:23652962-23653177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:10977059-10977401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 152
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr18:27079018-27078775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr18:23163045-23162769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr18:51691313-51691659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
2-544
               

               
Cow position:
               
chr18:9974179-9974744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
2-544
               

               
Cow position:
               
chr18:39001663-39002214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
2-544
               

               
Cow position:
               
chr18:52684451-52684993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 169
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr18:10117886-10117758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
3-136
               

               
Cow position:
               
chr18:10757907-10758041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
3-136
               

               
Cow position:
               
chr18:33364360-33364226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr18:36098508-36098370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr18:47175228-47175383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr18:22045261-22045418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 134
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr18:4000500-4000334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr18:56463578-56463746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr18:2144720-2144552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr18:24022765-24022598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:26586462-26586635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:41702984-41702816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:43125227-43125065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:45573531-45573359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:49602892-49603064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr18:697069-697241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr18:237963-238145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr18:18664215-18664402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr18:19809533-19809711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr18:21751530-21751346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr18:33757164-33756992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr18:39460366-39460191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr18:24946230-24946058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr18:19961986-19962184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 172
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr18:23649076-23648881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr18:11754277-11754086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr18:21969651-21969848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 167
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr18:39168680-39168485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr18:19796767-19796972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr18:38937970-38937772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 179
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr18:25757164-25757363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr18:45558293-45558095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr18:47125262-47125452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr18:14172063-14172260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 138
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr18:24719458-24719260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr18:4851335-4851531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr18:6075258-6075449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr18:47417150-47416948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr18:50359475-50359278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr18:53053079-53053288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:11657809-11657599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:45897877-45897676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr18:47693204-47693005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:38211309-38211099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr18:5647958-5647750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr18:19765336-19765121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr18:25598083-25598298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 194
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr18:31557007-31557226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 209
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr18:52251704-52251923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 209
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr18:44909202-44908970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr18:43014720-43014947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
226, 136
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr18:4649702-4649474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
176, 32
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr18:1931309-1931559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr18:47486196-47485946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr18:12584694-12584962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
3-267
               

               
Cow position:
               
chr18:34813802-34813524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr18:53642600-53642880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr18:37303304-37303010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr18:10214041-10214339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:4264246-4264538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 155
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr18:29474888-29474591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
135, 44
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:42290184-42290473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:42292912-42293201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr18:5632415-5632114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr18:36768666-36768956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:6005351-6005647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr18:24266253-24266568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr18:4556014-4556325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr18:19641124-19640823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr18:51643219-51643526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 89
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:25601175-25601480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr18:1571089-1571402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 223
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr18:30586086-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr18:8170941-8171261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr18:55747838-55747500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr18:48713692-48713359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr18:18961682-18962030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr18:1954430-1954784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 312
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr18:11691256-11691602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr18:16545312-16545656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 174
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr18:7965382-7965040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr18:26999039-26998673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 198
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr18:37381941-37382289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr18:7414884-7415226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr18:16313526-16313188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 145
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr18:39811433-39811763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 181
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr18:5072267-5072610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr18:46048904-46048561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 206
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr18:4495740-4496091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr18:55499220-55498859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr18:247547-247886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr18:7109281-7108903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
3-383
               

               
Cow position:
               
chr18:12023489-12023891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 298
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:15613714-15614135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:18918813-18919244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 116
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr18:50382400-50381963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr18:5766558-5766132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:20270861-20271319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 312
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:30341032-30341462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr18:11233571-11233104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr18:9366072-9365576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 308
               

               
Conread position:
               
3-465
               

               
Cow position:
               
chr18:10322946-10322480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
3-471
               

               
Cow position:
               
chr18:56181309-56181801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 109
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr18:10576253-10575740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-499
               

               
Cow position:
               
chr18:20173987-20174504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr18:29065242-29065753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr18:29372020-29371483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr18:55692968-55692438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 385
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr18:39662931-39662384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr18:20641351-20641884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr18:45903746-45904295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:6881208-6881748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:7956299-7955728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:9010855-9010313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 170
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:11867488-11866937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 247
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:19849621-19850164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:22120735-22121300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:29648930-29648370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 91
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:31672368-31672921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr18:51405767-51406310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr18:19193222-19193769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr18:43283606-43284182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr18:3180560-3179990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 228
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr18:5189541-5190117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 180
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr18:14871455-14871630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr18:34490430-34490251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr18:52383056-52382875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr18:40047355-40047552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 85
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr18:47565964-47565773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr18:42427765-42427557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr18:10065370-10065622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr18:24759510-24759767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:9846270-9846547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr18:36264632-36264918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr18:35874227-35873918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 179
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr18:1392420-1392740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 208
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr18:12273803-12273470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr18:14586330-14586667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr18:17956228-17956646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr18:10904996-10904549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
4-544
               

               
Cow position:
               
chr18:42747747-42747168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr18:17195198-17195361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr18:31727497-31727674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr18:50974137-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr18:346347-346684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 168
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr18:30430913-30430573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr18:52637379-52637719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr18:3212028-3211665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 302
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr18:35453077-35452677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 248
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr18:3115604-3115159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 207
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr18:12059142-12058718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 135
               

               
Conread position:
               
5-523
               

               
Cow position:
               
chr18:33504110-33504639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr18:23169728-23169532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr18:19296022-19295834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr18:48112819-48113018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr18:51643868-51644172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
6-503
               

               
Cow position:
               
chr18:12775634-12776151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 269
               

               
Conread position:
               
6-544
               

               
Cow position:
               
chr18:49655828-49655297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
6-555
               

               
Cow position:
               
chr18:29356486-29357067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
7-178
               

               
Cow position:
               
chr18:45186021-45185843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr18:32873741-32873408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 273
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr18:54572142-54572487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 188
               

               
Conread position:
               
8-213
               

               
Cow position:
               
chr18:23446913-23447124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr18:7951265-7950922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
8-555
               

               
Cow position:
               
chr18:28657769-28658338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 292
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr18:10051890-10051702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr18:14225531-14225349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
13-317
               

               
Cow position:
               
chr18:51675944-51676271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr18:28101770-28101437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 105
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr18:2863857-2864202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
16-173
               

               
Cow position:
               
chr18:4718399-4718235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr18:23821692-23822001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr18:35827239-35827413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr18:51192609-51192794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
17-544
               

               
Cow position:
               
chr18:21195207-21195757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
19-210
               

               
Cow position:
               
chr18:47920883-47920679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
19-336
               

               
Cow position:
               
chr18:1144055-1144384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr18:7945773-7945458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
26-168
               

               
Cow position:
               
chr18:23898543-23898399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
26-203
               

               
Cow position:
               
chr18:911986-912157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
26-342
               

               
Cow position:
               
chr18:858952-858609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
31-337
               

               
Cow position:
               
chr18:32883418-32883111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
177, 34
               

               
Conread position:
               
31-544
               

               
Cow position:
               
chr18:55806516-55807020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
32-452
               

               
Cow position:
               
chr18:29958052-29958473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
37-251
               

               
Cow position:
               
chr18:46647047-46647258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
103, 113
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr18:4748769-4749071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 220
               

               
Conread position:
               
39-287
               

               
Cow position:
               
chr18:49038573-49038314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 241
               

               
Conread position:
               
40-163
               

               
Cow position:
               
chr18:27637604-27637478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
42-284
               

               
Cow position:
               
chr18:48242296-48242045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
43-336
               

               
Cow position:
               
chr18:33008172-33007866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
44-169
               

               
Cow position:
               
chr18:52589860-52589987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
44-337
               

               
Cow position:
               
chr18:37023443-37023748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 256
               

               
Conread position:
               
49-202
               

               
Cow position:
               
chr18:38757734-38757891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
49-210
               

               
Cow position:
               
chr18:24342945-24342782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
49-236
               

               
Cow position:
               
chr18:4757471-4757658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr18:48962037-48961839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
49-279
               

               
Cow position:
               
chr18:19883634-19883391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
49-322
               

               
Cow position:
               
chr18:51178629-51178890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
49-341
               

               
Cow position:
               
chr18:19896350-19896655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 258
               

               
Conread position:
               
49-345
               

               
Cow position:
               
chr18:43020305-43020593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr18:24508130-24508455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 178
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr18:16997355-16997021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 248
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr18:52634970-52635500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
50-203
               

               
Cow position:
               
chr18:24529772-24529923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
50-210
               

               
Cow position:
               
chr18:6399534-6399693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr18:35692956-35692787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
50-237
               

               
Cow position:
               
chr18:4872163-4871980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr18:42988207-42988449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
50-307
               

               
Cow position:
               
chr18:56190861-56191136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr18:51190497-51190776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr18:21768713-21768437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr18:49200732-49200449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr18:51392543-51392837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 104
               

               
Conread position:
               
50-338
               

               
Cow position:
               
chr18:27109191-27109493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr18:48453772-48453494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
157, 25
               

               
Conread position:
               
50-537
               

               
Cow position:
               
chr18:10656540-10656035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr18:5701344-5701154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
51-400
               

               
Cow position:
               
chr18:4757936-4758303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
51-422
               

               
Cow position:
               
chr18:22214587-22214189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 259
               

               
Conread position:
               
51-496
               

               
Cow position:
               
chr18:29058402-29058863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
52-210
               

               
Cow position:
               
chr18:47123357-47123515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
52-222
               

               
Cow position:
               
chr18:19788078-19787905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
52-258
               

               
Cow position:
               
chr18:20175099-20175308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr18:19688123-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 256
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:47835922-47835660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr18:4625986-4625704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 154
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr18:21192317-21192697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
53-212
               

               
Cow position:
               
chr18:46072558-46072398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
53-398
               

               
Cow position:
               
chr18:2592071-2592446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
145, 92
               

               
Conread position:
               
53-416
               

               
Cow position:
               
chr18:5995565-5995181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
53-440
               

               
Cow position:
               
chr18:29080904-29080521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
53-450
               

               
Cow position:
               
chr18:19273001-19273424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
53-513
               

               
Cow position:
               
chr18:4673399-4672942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
53-553
               

               
Cow position:
               
chr18:55015457-55014964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
54-190
               

               
Cow position:
               
chr18:53092922-53093059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
54-299
               

               
Cow position:
               
chr18:52855152-52854892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 247
               

               
Conread position:
               
54-337
               

               
Cow position:
               
chr18:7359841-7359544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
54-337
               

               
Cow position:
               
chr18:21266602-21266315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
54-532
               

               
Cow position:
               
chr18:19646271-19645771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 186
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr18:23430041-23429746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 257
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chr18:3044538-3044239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
55-480
               

               
Cow position:
               
chr18:56159556-56159104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
56-219
               

               
Cow position:
               
chr18:27388677-27388515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
56-233
               

               
Cow position:
               
chr18:4624056-4624237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr18:55140465-55140697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
57-198
               

               
Cow position:
               
chr18:47410636-47410494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
57-203
               

               
Cow position:
               
chr18:22170711-22170564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr18:25282462-25282756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr18:47512099-47511795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr18:21740722-21740988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
58-531
               

               
Cow position:
               
chr18:36459023-36458528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr18:17005353-17004824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 418
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr18:4203839-4204064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
177, 90
               

               
Conread position:
               
59-424
               

               
Cow position:
               
chr18:33157906-33157522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
62-345
               

               
Cow position:
               
chr18:20127016-20127306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 224
               

               
Conread position:
               
64-334
               

               
Cow position:
               
chr18:36746173-36746447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 204
               

               
Conread position:
               
65-241
               

               
Cow position:
               
chr18:2549218-2549390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
65-336
               

               
Cow position:
               
chr18:56184020-56183747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 231
               

               
Conread position:
               
65-416
               

               
Cow position:
               
chr18:6609766-6610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
65-544
               

               
Cow position:
               
chr18:50082172-50082652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 230
               

               
Conread position:
               
66-337
               

               
Cow position:
               
chr18:25984493-25984765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
68-334
               

               
Cow position:
               
chr18:38344889-38344613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
69-337
               

               
Cow position:
               
chr18:51655961-51656244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
70-234
               

               
Cow position:
               
chr18:56301972-56301799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
70-311
               

               
Cow position:
               
chr18:51850484-51850729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
70-415
               

               
Cow position:
               
chr18:31586295-31586654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
70-517
               

               
Cow position:
               
chr18:29796348-29796825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
71-345
               

               
Cow position:
               
chr18:2619134-2619400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 135
               

               
Conread position:
               
74-359
               

               
Cow position:
               
chr18:18369286-18369580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
80-495
               

               
Cow position:
               
chr18:21575056-21574629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
80-544
               

               
Cow position:
               
chr18:3166418-3166894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
80-544
               

               
Cow position:
               
chr18:4182118-4182617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
82-203
               

               
Cow position:
               
chr18:15301210-15301088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
82-210
               

               
Cow position:
               
chr18:1607317-1607193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
82-312
               

               
Cow position:
               
chr18:2042419-2042665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
82-544
               

               
Cow position:
               
chr18:33793758-33793285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
82-544
               

               
Cow position:
               
chr18:35012249-35012724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
83-416
               

               
Cow position:
               
chr18:47517137-47517499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
83-438
               

               
Cow position:
               
chr18:15025741-15025364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
88-336
               

               
Cow position:
               
chr18:13360116-13359870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
89-202
               

               
Cow position:
               
chr18:2098683-2098797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
90-212
               

               
Cow position:
               
chr18:21708067-21708191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
90-291
               

               
Cow position:
               
chr18:49659823-49660024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 155
               

               
Conread position:
               
96-544
               

               
Cow position:
               
chr18:40759261-40758793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 230
               

               
Conread position:
               
112-339
               

               
Cow position:
               
chr18:47812507-47812272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
114-536
               

               
Cow position:
               
chr18:14815312-14815746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
119-346
               

               
Cow position:
               
chr18:7947422-7947181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
124-346
               

               
Cow position:
               
chr18:32430562-32430784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
125-465
               

               
Cow position:
               
chr18:8104914-8105283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 184
               

               
Conread position:
               
128-291
               

               
Cow position:
               
chr18:42966885-42966713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
129-337
               

               
Cow position:
               
chr18:219359-219137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
133-337
               

               
Cow position:
               
chr18:4368760-4368971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
138-519
               

               
Cow position:
               
chr18:21205380-21204995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
145-424
               

               
Cow position:
               
chr18:4648743-4649034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
149-298
               

               
Cow position:
               
chr18:37363799-37363645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
149-336
               

               
Cow position:
               
chr18:27637212-27637016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
149-337
               

               
Cow position:
               
chr18:16417706-16417888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
149-416
               

               
Cow position:
               
chr18:267815-268102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
156-518
               

               
Cow position:
               
chr18:10861436-10861808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 181
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr18:26586666-26586855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
158-346
               

               
Cow position:
               
chr18:15340453-15340648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 146
               

               
Conread position:
               
158-531
               

               
Cow position:
               
chr18:1584240-1584611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
159-555
               

               
Cow position:
               
chr18:33606621-33606201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 266
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr18:11680711-11680421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
166-538
               

               
Cow position:
               
chr18:3098338-3098726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 240
               

               
Conread position:
               
169-336
               

               
Cow position:
               
chr18:14871890-14872062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
180-345
               

               
Cow position:
               
chr18:28823000-28823172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
181-336
               

               
Cow position:
               
chr18:4316280-4316116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
181-337
               

               
Cow position:
               
chr18:43564194-43564036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
183-336
               

               
Cow position:
               
chr18:18868707-18868553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr18:18815733-18815881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
205-518
               

               
Cow position:
               
chr18:18340030-18340346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
206-345
               

               
Cow position:
               
chr18:36445377-36445235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
207-392
               

               
Cow position:
               
chr18:1582342-1582542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
208-337
               

               
Cow position:
               
chr18:24945872-24946004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr18:1586866-1587063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
210-535
               

               
Cow position:
               
chr18:1594006-1594339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
212-544
               

               
Cow position:
               
chr18:601253-601589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
218-539
               

               
Cow position:
               
chr18:24342543-24342213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 75
               
Show alignments to all cow chromosomes.