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Cow genome map

           
Conread name:
           
Pig1-107L24
        

               
Conread position:
               
1-555
               

               
Cow position:
               
chr22:11613607-11613027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr22:1714681-1714889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr22:5712765-5712557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr22:17652613-17652404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr22:12573386-12573052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr22:16291752-16292081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr22:5384815-5384407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
136, 42
               

               
Conread position:
               
2-538
               

               
Cow position:
               
chr22:18259397-18258844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr22:31870074-31870652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr22:18441264-18441129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr22:11790166-11790025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr22:1074447-1074291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr22:1552075-1551928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr22:11039638-11039476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr22:39471975-39472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr22:1819351-1819519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr22:12902676-12902837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr22:25312695-25312526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr22:43730462-43730303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 152
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr22:9735448-9735285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr22:1830223-1830062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr22:7518734-7518568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr22:10468690-10468523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr22:1046008-1046183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr22:12673152-12673326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr22:41025938-41025765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr22:45771846-45772015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr22:30615911-30615738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr22:6793700-6793868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr22:30687199-30687029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr22:35627530-35627343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr22:23630176-23630350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr22:1728412-1728234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr22:22433226-22433042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 173
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr22:12777204-12777380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr22:45788786-45788605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr22:35902241-35902429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr22:9279201-9279017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr22:1710714-1710518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr22:45104085-45104286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr22:4164159-4163965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr22:23265469-23265666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr22:2100769-2100962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr22:2109450-2109642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr22:14488118-14487919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr22:26112547-26112350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr22:26268028-26267834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 172
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr22:26233813-26233615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr22:2876618-2876817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr22:24542544-24542342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr22:26417460-26417263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr22:19413854-19414060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr22:4736206-4735999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr22:14641676-14641880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr22:39446474-39446268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr22:47562891-47562679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr22:4156636-4156848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr22:12447628-12447425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr22:30642953-30643165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr22:11352266-11352485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr22:42230341-42230557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr22:7496927-7497149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr22:35215731-35215505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 209
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr22:18545466-18545231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr22:6289319-6289557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 210
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr22:28672315-28672083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr22:13719855-13720087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
136, 160
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr22:8287360-8287126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
202, 137
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr22:8540055-8539823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr22:26804002-26803751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 210
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr22:16541469-16541729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr22:1858502-1858251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr22:25690098-25690363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr22:2408949-2409208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 183
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr22:7140828-7140549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr22:530398-530658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr22:25809101-25809365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr22:30607039-30606770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 196
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr22:23675793-23676058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr22:23735832-23736120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr22:3282649-3282933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr22:12678241-12678526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
49, 246
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr22:39215432-39215726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr22:26017580-26017843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
137, 7
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr22:12892181-12892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr22:12829430-12829728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr22:39602465-39602159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr22:5837441-5837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr22:27828557-27828261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr22:27275645-27275344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 201
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr22:3470469-3470176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 208
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr22:44410896-44410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr22:27681904-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
49, 312
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr22:11766868-11767193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr22:14372347-14372042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 158
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr22:43131374-43131694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 272
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr22:16340034-16339737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 190
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr22:15618787-15618461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 210
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr22:31599612-31599285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr22:33399309-33399642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 189
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr22:3534111-3533781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr22:8412710-8412364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 308
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:4162403-4162750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:6149208-6149547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 247
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:17126627-17126289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
202, 60
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:21890186-21890521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
205, 12
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:25221723-25222064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:34441452-34441796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 252
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:36432791-36433131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:534669-534331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:4156900-4157241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:9127578-9127240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:12313599-12313257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:13286628-13286284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:14378512-14378845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:41854082-41853730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:4075705-4076062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr22:10981565-10981219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:1849255-1848890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:2524130-2523788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:12315987-12315637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 116
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:30269581-30269239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
205, 35
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:3325767-3325411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:5016670-5016338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 61
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:12389282-12388917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 361
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:14844724-14844400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
234, 7
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:30818389-30818036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 91
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:24583892-24584285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr22:42685062-42684655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
205, 75
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr22:23180866-23181294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr22:17852458-17852884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr22:28146862-28146422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr22:4583741-4583307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr22:22613282-22612845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr22:28057862-28058307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:29642292-29641841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr22:9372706-9372249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 414
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr22:26339944-26339488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 311
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr22:37202028-37201583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
3-434
               

               
Cow position:
               
chr22:15490835-15490381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 293
               

               
Conread position:
               
3-437
               

               
Cow position:
               
chr22:4060768-4061222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 301
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr22:644601-645050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr22:40387331-40386854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 198
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr22:8090355-8090837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 147
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr22:13866848-13866309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 438
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr22:14142944-14143455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 102
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr22:15914866-15915370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr22:17949797-17950315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr22:16621372-16620815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 445
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr22:6610178-6610715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr22:6754083-6754619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 210
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr22:12803208-12803718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
136, 300
               

               
Conread position:
               
3-531
               

               
Cow position:
               
chr22:40374786-40374228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr22:11131049-11130496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 289
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr22:25247089-25246526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 159
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr22:40349521-40348961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
3-539
               

               
Cow position:
               
chr22:8733166-8733705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
3-539
               

               
Cow position:
               
chr22:21415796-21415248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
3-543
               

               
Cow position:
               
chr22:33447898-33448475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 184
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:1065287-1064745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:3301156-3301713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 251
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:10567539-10568074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:18025374-18025947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:19341374-19340810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:20627013-20626451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:27819177-27818610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:28937762-28938298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 53
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:29954836-29955387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 62
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:31646663-31646104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:32480287-32480854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 303
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr22:38939772-38940338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr22:4357263-4356712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr22:4563536-4562946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr22:10532673-10532095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr22:21568171-21567603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr22:25943639-25943082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr22:40120693-40121263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr22:6720901-6721479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr22:21012565-21011984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr22:32698943-32698386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr22:36539479-36540084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr22:44717900-44717311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 311
               

               
Conread position:
               
4-143
               

               
Cow position:
               
chr22:6127999-6128140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
4-159
               

               
Cow position:
               
chr22:16564324-16564168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr22:10671664-10671850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr22:29842542-29842728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr22:1776242-1776026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr22:1106249-1106029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr22:43704688-43704906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr22:1588474-1588253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr22:23372680-23372905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr22:14545743-14545999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 198
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr22:12749734-12749987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr22:2123469-2123173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr22:15668304-15668618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr22:11601214-11600875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr22:59792-59445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 168
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr22:25764313-25764649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
48, 188
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr22:10303194-10302848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr22:26134042-26134397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr22:14178653-14179094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr22:22860732-22861239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
4-533
               

               
Cow position:
               
chr22:15959595-15960150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
4-544
               

               
Cow position:
               
chr22:45513345-45513909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 152
               

               
Conread position:
               
4-555
               

               
Cow position:
               
chr22:6622072-6622646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr22:16346571-16346388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr22:10691420-10691602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr22:18966983-18967180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr22:2644111-2643906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 183
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr22:40870008-40869809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 159
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr22:18933533-18933813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr22:30484082-30483742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr22:23833465-23833026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
5-544
               

               
Cow position:
               
chr22:1289352-1289897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 170
               

               
Conread position:
               
5-544
               

               
Cow position:
               
chr22:7913632-7913098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr22:36209433-36209267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr22:8331178-8330986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr22:14676865-14676663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr22:16806764-16806564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr22:7361798-7362009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr22:35029436-35029231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr22:9597408-9597683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
167, 59
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr22:10609535-10609229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr22:21325559-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:6096839-6097199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr22:5595631-5596051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 172
               

               
Conread position:
               
6-497
               

               
Cow position:
               
chr22:21746815-21746302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
6-544
               

               
Cow position:
               
chr22:14091044-14091618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
6-550
               

               
Cow position:
               
chr22:1485043-1484465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 276
               

               
Conread position:
               
7-165
               

               
Cow position:
               
chr22:2036184-2036021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
7-178
               

               
Cow position:
               
chr22:43573125-43572944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
7-210
               

               
Cow position:
               
chr22:3945533-3945347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr22:32514473-32514256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr22:2095732-2095387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 303
               

               
Conread position:
               
7-544
               

               
Cow position:
               
chr22:8883186-8882628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr22:17244755-17245070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 205
               

               
Conread position:
               
8-397
               

               
Cow position:
               
chr22:2010968-2010556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 131
               

               
Conread position:
               
9-173
               

               
Cow position:
               
chr22:1991771-1991605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr22:15024935-15025274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 297
               

               
Conread position:
               
9-511
               

               
Cow position:
               
chr22:7154049-7153525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
10-443
               

               
Cow position:
               
chr22:766122-766569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
10-477
               

               
Cow position:
               
chr22:23758839-23759335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
12-199
               

               
Cow position:
               
chr22:17198312-17198118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr22:14006341-14006089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr22:47556024-47555742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 167
               

               
Conread position:
               
12-336
               

               
Cow position:
               
chr22:11697021-11697363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr22:23689030-23689380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
12-507
               

               
Cow position:
               
chr22:12681627-12682148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 276
               

               
Conread position:
               
13-166
               

               
Cow position:
               
chr22:27052566-27052720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
13-314
               

               
Cow position:
               
chr22:40789730-40789426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr22:28357200-28356874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
13-544
               

               
Cow position:
               
chr22:34895129-34894583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
14-394
               

               
Cow position:
               
chr22:6327602-6328004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
15-178
               

               
Cow position:
               
chr22:27401904-27401738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr22:48155588-48155442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
16-262
               

               
Cow position:
               
chr22:27907709-27907961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 239
               

               
Conread position:
               
16-544
               

               
Cow position:
               
chr22:16911633-16912179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
17-170
               

               
Cow position:
               
chr22:30641093-30640932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr22:17129172-17128976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
122, 49
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr22:15737399-15737162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr22:37145489-37145076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 214
               

               
Conread position:
               
17-563
               

               
Cow position:
               
chr22:1326587-1326012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr22:16845241-16845457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 189
               

               
Conread position:
               
18-544
               

               
Cow position:
               
chr22:18926524-18925964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 276
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr22:44684644-44684489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
19-326
               

               
Cow position:
               
chr22:34609165-34608846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
19-539
               

               
Cow position:
               
chr22:1309570-1310112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
20-137
               

               
Cow position:
               
chr22:66550-66432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
20-555
               

               
Cow position:
               
chr22:15039021-15039587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
21-544
               

               
Cow position:
               
chr22:15398414-15398967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr22:13878335-13878119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
23-503
               

               
Cow position:
               
chr22:12967913-12968402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
26-544
               

               
Cow position:
               
chr22:27322464-27321933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
27-262
               

               
Cow position:
               
chr22:23750744-23750984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
177, 113
               

               
Conread position:
               
27-337
               

               
Cow position:
               
chr22:23176288-23176607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
28-203
               

               
Cow position:
               
chr22:14381810-14381635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr22:9544239-9544543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
37-195
               

               
Cow position:
               
chr22:25846175-25846338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
37-544
               

               
Cow position:
               
chr22:27581580-27581059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
41-336
               

               
Cow position:
               
chr22:43119591-43119893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
42-185
               

               
Cow position:
               
chr22:7512752-7512611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
42-538
               

               
Cow position:
               
chr22:13769612-13769102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
43-553
               

               
Cow position:
               
chr22:2502962-2502439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
44-555
               

               
Cow position:
               
chr22:877651-877122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 261
               

               
Conread position:
               
46-253
               

               
Cow position:
               
chr22:24223203-24222997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
46-336
               

               
Cow position:
               
chr22:21295591-21295887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
159, 242
               

               
Conread position:
               
46-339
               

               
Cow position:
               
chr22:37324675-37324378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
47-203
               

               
Cow position:
               
chr22:6326577-6326420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
47-213
               

               
Cow position:
               
chr22:14140120-14139953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
47-329
               

               
Cow position:
               
chr22:31510245-31510526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
47-337
               

               
Cow position:
               
chr22:27047286-27047567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
167, 8
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr22:24610959-24611440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr22:8840737-8840574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
49-176
               

               
Cow position:
               
chr22:23801436-23801564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
49-203
               

               
Cow position:
               
chr22:43596206-43596361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
49-269
               

               
Cow position:
               
chr22:10286101-10285869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
49-312
               

               
Cow position:
               
chr22:31154082-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
49-334
               

               
Cow position:
               
chr22:1563122-1563413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 102
               

               
Conread position:
               
49-334
               

               
Cow position:
               
chr22:19173833-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr22:14690839-14691138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
49-408
               

               
Cow position:
               
chr22:2627712-2627322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 352
               

               
Conread position:
               
49-496
               

               
Cow position:
               
chr22:16812033-16812503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 465
               

               
Conread position:
               
49-538
               

               
Cow position:
               
chr22:32651622-32651125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
49-552
               

               
Cow position:
               
chr22:4017604-4017078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 98
               

               
Conread position:
               
49-555
               

               
Cow position:
               
chr22:32661640-32661116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
49-563
               

               
Cow position:
               
chr22:26316587-26316069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
50-201
               

               
Cow position:
               
chr22:24802569-24802722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
50-210
               

               
Cow position:
               
chr22:27944212-27944047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
50-216
               

               
Cow position:
               
chr22:24032085-24032253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr22:14647212-14647034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chr22:26123026-26122803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
50-285
               

               
Cow position:
               
chr22:6936386-6936149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
50-289
               

               
Cow position:
               
chr22:26421801-26422031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr22:34618928-34618673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-307
               

               
Cow position:
               
chr22:28665414-28665149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 245
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr22:24915967-24915682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr22:3950382-3950086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr22:16044286-16044586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-338
               

               
Cow position:
               
chr22:21530229-21530518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 218
               

               
Conread position:
               
50-341
               

               
Cow position:
               
chr22:32895347-32895052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr22:10421163-10420857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 255
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr22:16823220-16822929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
50-390
               

               
Cow position:
               
chr22:34606721-34606354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
50-398
               

               
Cow position:
               
chr22:8115958-8116326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
89, 234
               

               
Conread position:
               
50-424
               

               
Cow position:
               
chr22:846037-845633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr22:2623392-2623785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr22:27431573-27431963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
50-443
               

               
Cow position:
               
chr22:3317252-3316840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
50-464
               

               
Cow position:
               
chr22:5290980-5290533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 372
               

               
Conread position:
               
50-531
               

               
Cow position:
               
chr22:4535200-4535700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
50-538
               

               
Cow position:
               
chr22:13841268-13840760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
50-539
               

               
Cow position:
               
chr22:44180722-44180216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
50-544
               

               
Cow position:
               
chr22:32188724-32189228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 197
               

               
Conread position:
               
50-555
               

               
Cow position:
               
chr22:1609644-1610157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr22:10553556-10553767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
51-269
               

               
Cow position:
               
chr22:26075052-26074822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
51-334
               

               
Cow position:
               
chr22:18126607-18126900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr22:4119433-4119730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 255
               

               
Conread position:
               
51-424
               

               
Cow position:
               
chr22:35753178-35753576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
51-424
               

               
Cow position:
               
chr22:42612592-42612188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 359
               

               
Conread position:
               
51-478
               

               
Cow position:
               
chr22:41245387-41244918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
51-550
               

               
Cow position:
               
chr22:10338992-10339521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
52-180
               

               
Cow position:
               
chr22:25811821-25811948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
87, 117
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr22:18940964-18941152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 89
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr22:12570772-12570962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr22:1541030-1540773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
52-330
               

               
Cow position:
               
chr22:19891087-19890799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr22:6600554-6600847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 258
               

               
Conread position:
               
52-396
               

               
Cow position:
               
chr22:12800799-12800432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chr22:24175768-24176144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 96
               

               
Conread position:
               
52-467
               

               
Cow position:
               
chr22:16251447-16251878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 13
               

               
Conread position:
               
52-491
               

               
Cow position:
               
chr22:35161223-35161657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
52-512
               

               
Cow position:
               
chr22:23806413-23806905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
88, 199
               

               
Conread position:
               
52-544
               

               
Cow position:
               
chr22:18196637-18196118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
52-544
               

               
Cow position:
               
chr22:34726791-34726284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
53-319
               

               
Cow position:
               
chr22:36132922-36132650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 186
               

               
Conread position:
               
53-329
               

               
Cow position:
               
chr22:10919728-10920011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
53-336
               

               
Cow position:
               
chr22:26969917-26969617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
53-563
               

               
Cow position:
               
chr22:23831056-23830525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
54-190
               

               
Cow position:
               
chr22:31108694-31108557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
54-313
               

               
Cow position:
               
chr22:25540125-25539849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
54-414
               

               
Cow position:
               
chr22:33332964-33332573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr22:2912465-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
55-339
               

               
Cow position:
               
chr22:22908311-22908023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
153, 81
               

               
Conread position:
               
55-424
               

               
Cow position:
               
chr22:34750798-34750407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
55-544
               

               
Cow position:
               
chr22:6122760-6123275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 263
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr22:1279260-1279787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 521
               

               
Conread position:
               
56-213
               

               
Cow position:
               
chr22:23398280-23398439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-219
               

               
Cow position:
               
chr22:29389903-29389739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr22:4988440-4988719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
56-396
               

               
Cow position:
               
chr22:24732435-24732789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
56-532
               

               
Cow position:
               
chr22:3842741-3842249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
57-343
               

               
Cow position:
               
chr22:24628535-24628822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr22:21304119-21304321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr22:15020291-15020555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
58-395
               

               
Cow position:
               
chr22:23403520-23403882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
58-398
               

               
Cow position:
               
chr22:3252837-3253180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
58-412
               

               
Cow position:
               
chr22:26659163-26658797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
58-422
               

               
Cow position:
               
chr22:2216932-2216556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
58-544
               

               
Cow position:
               
chr22:32221760-32221272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
59-324
               

               
Cow position:
               
chr22:1265803-1266083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr22:23741581-23741853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr22:30049445-30049734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
82, 247
               

               
Conread position:
               
59-343
               

               
Cow position:
               
chr22:7165085-7164781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
60-508
               

               
Cow position:
               
chr22:23857167-23856695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 241
               

               
Conread position:
               
61-544
               

               
Cow position:
               
chr22:14924613-14925110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 291
               

               
Conread position:
               
62-517
               

               
Cow position:
               
chr22:25477165-25476703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
63-345
               

               
Cow position:
               
chr22:34712842-34712543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr22:590455-589947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
66-178
               

               
Cow position:
               
chr22:12599485-12599372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
66-212
               

               
Cow position:
               
chr22:10752427-10752575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
66-337
               

               
Cow position:
               
chr22:7852076-7851797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
66-544
               

               
Cow position:
               
chr22:34475884-34476390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 352
               

               
Conread position:
               
66-555
               

               
Cow position:
               
chr22:25742835-25743368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 233
               

               
Conread position:
               
67-190
               

               
Cow position:
               
chr22:23400804-23400679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr22:45505892-45506082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
67-335
               

               
Cow position:
               
chr22:10633027-10632755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
67-337
               

               
Cow position:
               
chr22:23121889-23122188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
67-415
               

               
Cow position:
               
chr22:19047703-19048064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 232
               

               
Conread position:
               
67-538
               

               
Cow position:
               
chr22:34616419-34615928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
67-544
               

               
Cow position:
               
chr22:24734204-24734707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
68-327
               

               
Cow position:
               
chr22:45846253-45845990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
69-544
               

               
Cow position:
               
chr22:26184050-26184551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
70-424
               

               
Cow position:
               
chr22:19775323-19775695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
71-262
               

               
Cow position:
               
chr22:7832245-7832439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 143
               

               
Conread position:
               
73-346
               

               
Cow position:
               
chr22:11458922-11458654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
74-255
               

               
Cow position:
               
chr22:28704290-28704104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 173
               

               
Conread position:
               
82-336
               

               
Cow position:
               
chr22:9283500-9283763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 222
               

               
Conread position:
               
82-336
               

               
Cow position:
               
chr22:21355043-21355306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 218
               

               
Conread position:
               
82-345
               

               
Cow position:
               
chr22:17125680-17125408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
82-397
               

               
Cow position:
               
chr22:12946084-12946409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
82-425
               

               
Cow position:
               
chr22:15090840-15090467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 224
               

               
Conread position:
               
82-555
               

               
Cow position:
               
chr22:4645869-4645377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
86-253
               

               
Cow position:
               
chr22:29344972-29344796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
88-326
               

               
Cow position:
               
chr22:27835626-27835377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
89-210
               

               
Cow position:
               
chr22:28728590-28728710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
90-544
               

               
Cow position:
               
chr22:1975699-1975240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
92-336
               

               
Cow position:
               
chr22:11819615-11819869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr22:43291816-43292063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
114, 55
               

               
Conread position:
               
95-345
               

               
Cow position:
               
chr22:11257663-11257909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
96-544
               

               
Cow position:
               
chr22:7838673-7838216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
112-292
               

               
Cow position:
               
chr22:13849385-13849568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
113-504
               

               
Cow position:
               
chr22:4990100-4990521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 191
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr22:10983414-10983184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 189
               

               
Conread position:
               
124-288
               

               
Cow position:
               
chr22:14835170-14835338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr22:4135670-4135492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
128-526
               

               
Cow position:
               
chr22:14376360-14376762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 117
               

               
Conread position:
               
136-334
               

               
Cow position:
               
chr22:25629721-25629926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 158
               

               
Conread position:
               
142-544
               

               
Cow position:
               
chr22:30955064-30954649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
146-345
               

               
Cow position:
               
chr22:10585670-10585875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
146-532
               

               
Cow position:
               
chr22:41270968-41271368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 154
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr22:10292988-10292810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
160-420
               

               
Cow position:
               
chr22:1991486-1991222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
160-538
               

               
Cow position:
               
chr22:4974404-4974775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
165-546
               

               
Cow position:
               
chr22:30712774-30712355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
166-337
               

               
Cow position:
               
chr22:12599100-12598921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
166-416
               

               
Cow position:
               
chr22:28731690-28731424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
168-337
               

               
Cow position:
               
chr22:11497212-11497027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr22:12777581-12777921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
172-342
               

               
Cow position:
               
chr22:18218882-18219062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
200-478
               

               
Cow position:
               
chr22:14601476-14601197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
206-346
               

               
Cow position:
               
chr22:3945144-3944999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
211-419
               

               
Cow position:
               
chr22:27401498-27401280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
234-501
               

               
Cow position:
               
chr22:37817693-37817418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 211
               

               
Conread position:
               
240-563
               

               
Cow position:
               
chr22:11489464-11489134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 42
               
Show alignments to all cow chromosomes.